Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 NEFMP1-201ENST00000443423 1006 ntBASIC1.86□□□□□ -2.11
CXCL12P48061 ZNF114P1-201ENST00000453500 292 ntBASIC1.86□□□□□ -2.11
CXCL12P48061 FABP5P15-201ENST00000453566 214 ntBASIC1.86□□□□□ -2.11
CXCL12P48061 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.86□□□□□ -2.11
CXCL12P48061 AC107626.1-201ENST00000471084 183 ntBASIC1.86□□□□□ -2.11
CXCL12P48061 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.86□□□□□ -2.11
CXCL12P48061 AC139453.3-201ENST00000493276 369 ntBASIC1.86□□□□□ -2.11
CXCL12P48061 MTCYBP35-201ENST00000503630 1137 ntBASIC1.86□□□□□ -2.11
CXCL12P48061 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.86□□□□□ -2.11
CXCL12P48061 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.86□□□□□ -2.11
CXCL12P48061 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.86□□□□□ -2.11
CXCL12P48061 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
CXCL12P48061 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.86□□□□□ -2.11
CXCL12P48061 FAM92A1P1-201ENST00000528023 890 ntBASIC1.86□□□□□ -2.11
CXCL12P48061 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.86□□□□□ -2.11
CXCL12P48061 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.86□□□□□ -2.11
CXCL12P48061 PCMTD1P2-201ENST00000565017 355 ntBASIC1.86□□□□□ -2.11
CXCL12P48061 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.86□□□□□ -2.11
CXCL12P48061 RPS3AP23-202ENST00000574601 686 ntBASIC1.86□□□□□ -2.11
CXCL12P48061 MIR3118-1-201ENST00000581787 76 ntBASIC1.86□□□□□ -2.11
CXCL12P48061 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.86□□□□□ -2.11
CXCL12P48061 AC007363.1-201ENST00000604736 620 ntBASIC1.86□□□□□ -2.11
CXCL12P48061 uc_338.12-201ENST00000616344 181 ntBASIC1.86□□□□□ -2.11
CXCL12P48061 AC104010.1-201ENST00000616889 150 ntBASIC1.86□□□□□ -2.11
CXCL12P48061 AC006338.1-201ENST00000618453 749 ntBASIC1.86□□□□□ -2.11
CXCL12P48061 AC131159.1-201ENST00000621854 213 ntBASIC1.86□□□□□ -2.11
CXCL12P48061 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.86□□□□□ -2.11
CXCL12P48061 AC091953.2-201ENST00000623979 160 ntBASIC1.86□□□□□ -2.11
CXCL12P48061 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CXCL12P48061 AC006927.3-201ENST00000638789 384 ntBASIC1.86□□□□□ -2.11
CXCL12P48061 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.86□□□□□ -2.11
CXCL12P48061 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CXCL12P48061 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
CXCL12P48061 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CXCL12P48061 RNU6-461P-201ENST00000364195 107 ntBASIC1.85□□□□□ -2.11
CXCL12P48061 SNORA68.1-201ENST00000364537 132 ntBASIC1.85□□□□□ -2.11
CXCL12P48061 SNORA25.9-201ENST00000365087 128 ntBASIC1.85□□□□□ -2.11
CXCL12P48061 Y_RNA.355-201ENST00000365462 98 ntBASIC1.85□□□□□ -2.11
CXCL12P48061 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
CXCL12P48061 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.85□□□□□ -2.11
CXCL12P48061 RAC1P6-201ENST00000423911 575 ntBASIC1.85□□□□□ -2.11
CXCL12P48061 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.85□□□□□ -2.11
CXCL12P48061 RPL36AP53-201ENST00000432891 316 ntBASIC1.85□□□□□ -2.11
CXCL12P48061 EPS15P1-201ENST00000448836 336 ntBASIC1.85□□□□□ -2.11
CXCL12P48061 RNU7-125P-201ENST00000458760 62 ntBASIC1.85□□□□□ -2.11
CXCL12P48061 RNU7-26P-201ENST00000458980 63 ntBASIC1.85□□□□□ -2.11
CXCL12P48061 AC098591.2-201ENST00000510152 315 ntBASIC1.85□□□□□ -2.11
CXCL12P48061 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.85□□□□□ -2.11
CXCL12P48061 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.85□□□□□ -2.11
CXCL12P48061 SNORA31.18-201ENST00000517043 134 ntBASIC1.85□□□□□ -2.11
CXCL12P48061 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CXCL12P48061 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.85□□□□□ -2.11
CXCL12P48061 MIR5697-201ENST00000578045 78 ntBASIC1.85□□□□□ -2.11
CXCL12P48061 AC034229.4-201ENST00000607861 441 ntBASIC1.85□□□□□ -2.11
CXCL12P48061 AL355816.2-201ENST00000610049 647 ntBASIC1.85□□□□□ -2.11
CXCL12P48061 AC004223.4-201ENST00000612426 332 ntBASIC1.85□□□□□ -2.11
CXCL12P48061 AC027807.2-201ENST00000616099 408 ntBASIC1.85□□□□□ -2.11
CXCL12P48061 AC009159.2-201ENST00000617603 606 ntBASIC1.85□□□□□ -2.11
CXCL12P48061 AL589994.2-201ENST00000621124 579 ntBASIC1.85□□□□□ -2.11
CXCL12P48061 MIR7515-201ENST00000637837 67 ntBASIC1.85□□□□□ -2.11
CXCL12P48061 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.85□□□□□ -2.11
CXCL12P48061 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
CXCL12P48061 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.85□□□□□ -2.11
CXCL12P48061 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CXCL12P48061 AC092104.1-201ENST00000497346 1441 ntBASIC1.84□□□□□ -2.11
CXCL12P48061 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
CXCL12P48061 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.84□□□□□ -2.11
CXCL12P48061 RNU6-511P-201ENST00000363496 107 ntBASIC1.84□□□□□ -2.11
CXCL12P48061 RNU6-288P-201ENST00000363690 104 ntBASIC1.84□□□□□ -2.11
CXCL12P48061 Z98749.2-208ENST00000381646 500 ntBASIC1.84□□□□□ -2.11
CXCL12P48061 RNU6-750P-201ENST00000390946 107 ntBASIC1.84□□□□□ -2.11
CXCL12P48061 AL513475.1-201ENST00000406602 315 ntBASIC1.84□□□□□ -2.11
CXCL12P48061 MIR1294-201ENST00000408503 142 ntBASIC1.84□□□□□ -2.11
CXCL12P48061 U3.37-201ENST00000408528 213 ntBASIC1.84□□□□□ -2.11
CXCL12P48061 RNU2-62P-201ENST00000410868 191 ntBASIC1.84□□□□□ -2.11
CXCL12P48061 NDUFS5P4-201ENST00000412983 318 ntBASIC1.84□□□□□ -2.11
CXCL12P48061 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.84□□□□□ -2.11
CXCL12P48061 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.84□□□□□ -2.11
CXCL12P48061 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.84□□□□□ -2.11
CXCL12P48061 MED14P1-201ENST00000430517 648 ntBASIC1.84□□□□□ -2.11
CXCL12P48061 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.84□□□□□ -2.11
CXCL12P48061 AL590365.1-201ENST00000450788 243 ntBASIC1.84□□□□□ -2.11
CXCL12P48061 SSXP1-201ENST00000453640 473 ntBASIC1.84□□□□□ -2.11
CXCL12P48061 SNRPGP9-201ENST00000456025 225 ntBASIC1.84□□□□□ -2.11
CXCL12P48061 RPL37P6-201ENST00000460682 294 ntBASIC1.84□□□□□ -2.11
CXCL12P48061 AC112204.1-201ENST00000502591 103 ntBASIC1.84□□□□□ -2.11
CXCL12P48061 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.84□□□□□ -2.11
CXCL12P48061 BTF3P12-201ENST00000519620 469 ntBASIC1.84□□□□□ -2.11
CXCL12P48061 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.84□□□□□ -2.11
CXCL12P48061 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.84□□□□□ -2.11
CXCL12P48061 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.84□□□□□ -2.11
CXCL12P48061 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.84□□□□□ -2.11
CXCL12P48061 MIR3117-201ENST00000584034 78 ntBASIC1.84□□□□□ -2.11
CXCL12P48061 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.84□□□□□ -2.11
CXCL12P48061 AL358072.1-201ENST00000604156 575 ntBASIC1.84□□□□□ -2.11
CXCL12P48061 AC121334.2-201ENST00000605387 271 ntBASIC1.84□□□□□ -2.11
CXCL12P48061 MIR502-201ENST00000606349 86 ntBASIC1.84□□□□□ -2.11
CXCL12P48061 AC087683.2-201ENST00000611384 326 ntBASIC1.84□□□□□ -2.11
CXCL12P48061 DUSP12P1-201ENST00000612874 516 ntBASIC1.84□□□□□ -2.11
CXCL12P48061 AC079416.3-201ENST00000624479 549 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms