Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 Y_RNA.373-201ENST00000365600 103 ntBASIC3.26□□□□□ -1.89
HTR3AP46098 MIR514A2-201ENST00000385131 88 ntBASIC3.26□□□□□ -1.89
HTR3AP46098 MIR514A3-201ENST00000385132 88 ntBASIC3.26□□□□□ -1.89
HTR3AP46098 EIF4E2P1-201ENST00000393781 255 ntBASIC3.26□□□□□ -1.89
HTR3AP46098 MIR1277-201ENST00000408536 78 ntBASIC3.26□□□□□ -1.89
HTR3AP46098 RN7SKP202-201ENST00000410439 330 ntBASIC3.26□□□□□ -1.89
HTR3AP46098 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.26□□□□□ -1.89
HTR3AP46098 BX323014.1-201ENST00000412876 237 ntBASIC3.26□□□□□ -1.89
HTR3AP46098 AC097463.2-201ENST00000421074 142 ntBASIC3.26□□□□□ -1.89
HTR3AP46098 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.26□□□□□ -1.89
HTR3AP46098 BX276092.3-201ENST00000424182 230 ntBASIC3.26□□□□□ -1.89
HTR3AP46098 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.26□□□□□ -1.89
HTR3AP46098 VN1R34P-201ENST00000447387 883 ntBASIC3.26□□□□□ -1.89
HTR3AP46098 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.26□□□□□ -1.89
HTR3AP46098 RNU7-138P-201ENST00000459479 64 ntBASIC3.26□□□□□ -1.89
HTR3AP46098 AC112771.1-201ENST00000463581 102 ntBASIC3.26□□□□□ -1.89
HTR3AP46098 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
HTR3AP46098 RPL23AP45-201ENST00000476406 468 ntBASIC3.26□□□□□ -1.89
HTR3AP46098 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.26□□□□□ -1.89
HTR3AP46098 RN7SKP18-201ENST00000516005 275 ntBASIC3.26□□□□□ -1.89
HTR3AP46098 SCARNA3-201ENST00000517097 143 ntBASIC3.26□□□□□ -1.89
HTR3AP46098 AC087854.1-201ENST00000519706 414 ntBASIC3.26□□□□□ -1.89
HTR3AP46098 AC068657.1-201ENST00000520807 306 ntBASIC3.26□□□□□ -1.89
HTR3AP46098 RNU6-323P-201ENST00000521915 107 ntBASIC3.26□□□□□ -1.89
HTR3AP46098 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.26□□□□□ -1.89
HTR3AP46098 MIR3117-201ENST00000584034 78 ntBASIC3.26□□□□□ -1.89
HTR3AP46098 RPS15AP11-201ENST00000594193 385 ntBASIC3.26□□□□□ -1.89
HTR3AP46098 AC012493.2-201ENST00000595083 291 ntBASIC3.26□□□□□ -1.89
HTR3AP46098 AC146944.4-201ENST00000602697 718 ntBASIC3.26□□□□□ -1.89
HTR3AP46098 APOOP1-201ENST00000604695 592 ntBASIC3.26□□□□□ -1.89
HTR3AP46098 RMST_7.1-201ENST00000621935 268 ntBASIC3.26□□□□□ -1.89
HTR3AP46098 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
HTR3AP46098 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
HTR3AP46098 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
HTR3AP46098 Z75746.1-201ENST00000440243 2080 ntBASIC3.26□□□□□ -1.89
HTR3AP46098 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HTR3AP46098 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
HTR3AP46098 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HTR3AP46098 SNORD56.1-201ENST00000362913 68 ntBASIC3.25□□□□□ -1.89
HTR3AP46098 RNA5SP479-201ENST00000364858 117 ntBASIC3.25□□□□□ -1.89
HTR3AP46098 RNU6-487P-201ENST00000365430 104 ntBASIC3.25□□□□□ -1.89
HTR3AP46098 U8.11-201ENST00000384699 133 ntBASIC3.25□□□□□ -1.89
HTR3AP46098 U8.12-201ENST00000384701 133 ntBASIC3.25□□□□□ -1.89
HTR3AP46098 MIR218-1-201ENST00000384999 110 ntBASIC3.25□□□□□ -1.89
HTR3AP46098 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC3.25□□□□□ -1.89
HTR3AP46098 RNA5SP118-201ENST00000410385 109 ntBASIC3.25□□□□□ -1.89
HTR3AP46098 Y_RNA.599-201ENST00000410489 109 ntBASIC3.25□□□□□ -1.89
HTR3AP46098 CYCSP19-201ENST00000411715 316 ntBASIC3.25□□□□□ -1.89
HTR3AP46098 AC126124.2-201ENST00000413542 321 ntBASIC3.25□□□□□ -1.89
HTR3AP46098 AC074117.2-201ENST00000417130 397 ntBASIC3.25□□□□□ -1.89
HTR3AP46098 AC009161.1-201ENST00000417306 376 ntBASIC3.25□□□□□ -1.89
HTR3AP46098 AL035423.1-201ENST00000420331 213 ntBASIC3.25□□□□□ -1.89
HTR3AP46098 AP000907.1-201ENST00000428428 510 ntBASIC3.25□□□□□ -1.89
HTR3AP46098 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.25□□□□□ -1.89
HTR3AP46098 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.25□□□□□ -1.89
HTR3AP46098 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.25□□□□□ -1.89
HTR3AP46098 U8.18-201ENST00000459285 133 ntBASIC3.25□□□□□ -1.89
HTR3AP46098 AC133134.1-201ENST00000466800 359 ntBASIC3.25□□□□□ -1.89
HTR3AP46098 RN7SL594P-201ENST00000470590 287 ntBASIC3.25□□□□□ -1.89
HTR3AP46098 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.25□□□□□ -1.89
HTR3AP46098 AC023141.11-201ENST00000508864 202 ntBASIC3.25□□□□□ -1.89
HTR3AP46098 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.25□□□□□ -1.89
HTR3AP46098 AC011352.1-201ENST00000512300 793 ntBASIC3.25□□□□□ -1.89
HTR3AP46098 AL133241.1-201ENST00000556832 487 ntBASIC3.25□□□□□ -1.89
HTR3AP46098 AC106785.1-201ENST00000565935 262 ntBASIC3.25□□□□□ -1.89
HTR3AP46098 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.25□□□□□ -1.89
HTR3AP46098 AP003465.2-201ENST00000602571 373 ntBASIC3.25□□□□□ -1.89
HTR3AP46098 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.25□□□□□ -1.89
HTR3AP46098 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HTR3AP46098 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.25□□□□□ -1.89
HTR3AP46098 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.25□□□□□ -1.89
HTR3AP46098 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
HTR3AP46098 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HTR3AP46098 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
HTR3AP46098 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
HTR3AP46098 MTND4P27-201ENST00000450813 1354 ntBASIC3.25□□□□□ -1.89
HTR3AP46098 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HTR3AP46098 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HTR3AP46098 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HTR3AP46098 OR56A5-201ENST00000340110 738 ntBASIC3.24□□□□□ -1.89
HTR3AP46098 RNU6-461P-201ENST00000364195 107 ntBASIC3.24□□□□□ -1.89
HTR3AP46098 RNU6-534P-201ENST00000364877 106 ntBASIC3.24□□□□□ -1.89
HTR3AP46098 AL513475.1-201ENST00000406602 315 ntBASIC3.24□□□□□ -1.89
HTR3AP46098 SNORD56-201ENST00000413522 71 ntBASIC3.24□□□□□ -1.89
HTR3AP46098 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.24□□□□□ -1.89
HTR3AP46098 SMURF2P1-201ENST00000514992 481 ntBASIC3.24□□□□□ -1.89
HTR3AP46098 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.24□□□□□ -1.89
HTR3AP46098 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
HTR3AP46098 AL118558.2-201ENST00000556294 238 ntBASIC3.24□□□□□ -1.89
HTR3AP46098 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.24□□□□□ -1.89
HTR3AP46098 AC107304.1-201ENST00000604229 296 ntBASIC3.24□□□□□ -1.89
HTR3AP46098 AL449363.1-201ENST00000617815 186 ntBASIC3.24□□□□□ -1.89
HTR3AP46098 AC024581.2-201ENST00000619986 252 ntBASIC3.24□□□□□ -1.89
HTR3AP46098 MIR3662-201ENST00000637030 95 ntBASIC3.24□□□□□ -1.89
HTR3AP46098 U4.7-201ENST00000638126 106 ntBASIC3.24□□□□□ -1.89
HTR3AP46098 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.24□□□□□ -1.89
HTR3AP46098 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
HTR3AP46098 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HTR3AP46098 AC080128.1-201ENST00000474389 1917 ntBASIC3.23□□□□□ -1.89
HTR3AP46098 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms