Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RFC3P40938 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RFC3P40938 RNA5SP160-201ENST00000364866 120 ntBASIC1.8□□□□□ -2.12
RFC3P40938 RNY3P13-201ENST00000365542 102 ntBASIC1.8□□□□□ -2.12
RFC3P40938 SMIM11P1-201ENST00000369586 178 ntBASIC1.8□□□□□ -2.12
RFC3P40938 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
RFC3P40938 RNU6-83P-201ENST00000384568 112 ntBASIC1.8□□□□□ -2.12
RFC3P40938 MIR583-201ENST00000384846 75 ntBASIC1.8□□□□□ -2.12
RFC3P40938 MIR676-201ENST00000390702 67 ntBASIC1.8□□□□□ -2.12
RFC3P40938 SNORA40C-201ENST00000391285 128 ntBASIC1.8□□□□□ -2.12
RFC3P40938 SUMO2P12-201ENST00000405924 140 ntBASIC1.8□□□□□ -2.12
RFC3P40938 AC127391.1-201ENST00000411737 98 ntBASIC1.8□□□□□ -2.12
RFC3P40938 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.8□□□□□ -2.12
RFC3P40938 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.8□□□□□ -2.12
RFC3P40938 RPL7P54-201ENST00000438336 674 ntBASIC1.8□□□□□ -2.12
RFC3P40938 AL161788.1-201ENST00000441805 169 ntBASIC1.8□□□□□ -2.12
RFC3P40938 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.8□□□□□ -2.12
RFC3P40938 AL078601.1-201ENST00000444542 271 ntBASIC1.8□□□□□ -2.12
RFC3P40938 FABP5P13-201ENST00000452144 328 ntBASIC1.8□□□□□ -2.12
RFC3P40938 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.8□□□□□ -2.12
RFC3P40938 Y_RNA.638-201ENST00000459374 113 ntBASIC1.8□□□□□ -2.12
RFC3P40938 RPL7P43-201ENST00000478876 753 ntBASIC1.8□□□□□ -2.12
RFC3P40938 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.8□□□□□ -2.12
RFC3P40938 CKS1BP2-201ENST00000497342 240 ntBASIC1.8□□□□□ -2.12
RFC3P40938 UBE2V1P12-201ENST00000503954 474 ntBASIC1.8□□□□□ -2.12
RFC3P40938 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.8□□□□□ -2.12
RFC3P40938 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.8□□□□□ -2.12
RFC3P40938 RNU6-678P-201ENST00000516832 109 ntBASIC1.8□□□□□ -2.12
RFC3P40938 RNU6-548P-201ENST00000517083 115 ntBASIC1.8□□□□□ -2.12
RFC3P40938 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.8□□□□□ -2.12
RFC3P40938 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.8□□□□□ -2.12
RFC3P40938 AK6P1-201ENST00000540219 478 ntBASIC1.8□□□□□ -2.12
RFC3P40938 ARL2BPP2-201ENST00000550907 489 ntBASIC1.8□□□□□ -2.12
RFC3P40938 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.8□□□□□ -2.12
RFC3P40938 AC110588.1-201ENST00000559699 137 ntBASIC1.8□□□□□ -2.12
RFC3P40938 MIR3126-201ENST00000577443 74 ntBASIC1.8□□□□□ -2.12
RFC3P40938 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RFC3P40938 AC007229.1-201ENST00000590455 412 ntBASIC1.8□□□□□ -2.12
RFC3P40938 AL670379.10-201ENST00000604330 253 ntBASIC1.8□□□□□ -2.12
RFC3P40938 AL670379.9-201ENST00000605428 253 ntBASIC1.8□□□□□ -2.12
RFC3P40938 MIR6845-201ENST00000613182 61 ntBASIC1.8□□□□□ -2.12
RFC3P40938 AL589994.2-201ENST00000621124 579 ntBASIC1.8□□□□□ -2.12
RFC3P40938 DUXAP9-208ENST00000622815 614 ntBASIC1.8□□□□□ -2.12
RFC3P40938 AC091932.3-201ENST00000624223 323 ntBASIC1.8□□□□□ -2.12
RFC3P40938 AC006927.4-201ENST00000639187 543 ntBASIC1.8□□□□□ -2.12
RFC3P40938 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
RFC3P40938 ZNF29P-201ENST00000225587 168 ntBASIC1.79□□□□□ -2.12
RFC3P40938 AC138393.1-203ENST00000327086 343 ntBASIC1.79□□□□□ -2.12
RFC3P40938 RNU6-511P-201ENST00000363496 107 ntBASIC1.79□□□□□ -2.12
RFC3P40938 U8.13-201ENST00000390842 128 ntBASIC1.79□□□□□ -2.12
RFC3P40938 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.79□□□□□ -2.12
RFC3P40938 AC019129.1-201ENST00000403786 261 ntBASIC1.79□□□□□ -2.12
RFC3P40938 FCF1P10-201ENST00000407590 479 ntBASIC1.79□□□□□ -2.12
RFC3P40938 RNU2-36P-201ENST00000410361 191 ntBASIC1.79□□□□□ -2.12
RFC3P40938 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.79□□□□□ -2.12
RFC3P40938 AL160275.3-201ENST00000423876 471 ntBASIC1.79□□□□□ -2.12
RFC3P40938 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.79□□□□□ -2.12
RFC3P40938 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.79□□□□□ -2.12
RFC3P40938 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.79□□□□□ -2.12
RFC3P40938 MTND1P32-201ENST00000433043 938 ntBASIC1.79□□□□□ -2.12
RFC3P40938 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.79□□□□□ -2.12
RFC3P40938 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.79□□□□□ -2.12
RFC3P40938 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.79□□□□□ -2.12
RFC3P40938 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.79□□□□□ -2.12
RFC3P40938 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.79□□□□□ -2.12
RFC3P40938 MTAPP1-201ENST00000489154 819 ntBASIC1.79□□□□□ -2.12
RFC3P40938 FAM92A1P2-202ENST00000504766 877 ntBASIC1.79□□□□□ -2.12
RFC3P40938 RNU6-237P-201ENST00000515985 71 ntBASIC1.79□□□□□ -2.12
RFC3P40938 RNA5SP137-201ENST00000516833 135 ntBASIC1.79□□□□□ -2.12
RFC3P40938 RNU6-1003P-201ENST00000517099 105 ntBASIC1.79□□□□□ -2.12
RFC3P40938 RNU6-201P-201ENST00000517100 61 ntBASIC1.79□□□□□ -2.12
RFC3P40938 RNU6-1315P-201ENST00000517187 99 ntBASIC1.79□□□□□ -2.12
RFC3P40938 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.79□□□□□ -2.12
RFC3P40938 MIR4529-201ENST00000578110 78 ntBASIC1.79□□□□□ -2.12
RFC3P40938 MIR5089-201ENST00000580047 84 ntBASIC1.79□□□□□ -2.12
RFC3P40938 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.79□□□□□ -2.12
RFC3P40938 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.79□□□□□ -2.12
RFC3P40938 AC078899.2-201ENST00000595282 212 ntBASIC1.79□□□□□ -2.12
RFC3P40938 AC174048.1-201ENST00000603389 144 ntBASIC1.79□□□□□ -2.12
RFC3P40938 AL713866.2-201ENST00000603579 219 ntBASIC1.79□□□□□ -2.12
RFC3P40938 BNIP3P10-201ENST00000605360 577 ntBASIC1.79□□□□□ -2.12
RFC3P40938 AC013244.3-201ENST00000605614 388 ntBASIC1.79□□□□□ -2.12
RFC3P40938 AC022893.3-201ENST00000607665 437 ntBASIC1.79□□□□□ -2.12
RFC3P40938 AL391813.2-201ENST00000609113 322 ntBASIC1.79□□□□□ -2.12
RFC3P40938 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.79□□□□□ -2.12
RFC3P40938 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
RFC3P40938 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
RFC3P40938 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
RFC3P40938 MTND4P16-201ENST00000466108 1367 ntBASIC1.78□□□□□ -2.12
RFC3P40938 SNORA4.3-201ENST00000365564 137 ntBASIC1.78□□□□□ -2.12
RFC3P40938 RNU6-166P-201ENST00000384371 107 ntBASIC1.78□□□□□ -2.12
RFC3P40938 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.78□□□□□ -2.12
RFC3P40938 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.78□□□□□ -2.12
RFC3P40938 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.78□□□□□ -2.12
RFC3P40938 CYCSP49-201ENST00000420810 319 ntBASIC1.78□□□□□ -2.12
RFC3P40938 AL353777.1-201ENST00000425552 326 ntBASIC1.78□□□□□ -2.12
RFC3P40938 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.78□□□□□ -2.12
RFC3P40938 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.78□□□□□ -2.12
RFC3P40938 AL591212.2-201ENST00000433923 257 ntBASIC1.78□□□□□ -2.12
RFC3P40938 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms