Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.6□□□□□ -1.83
COL15A1P39059 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.6□□□□□ -1.83
COL15A1P39059 UBE2V2P2-201ENST00000587677 504 ntBASIC3.6□□□□□ -1.83
COL15A1P39059 AC104260.1-201ENST00000616660 539 ntBASIC3.6□□□□□ -1.83
COL15A1P39059 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
COL15A1P39059 AC108206.1-201ENST00000570186 4159 ntBASIC3.6□□□□□ -1.83
COL15A1P39059 AC008568.2-201ENST00000623862 2313 ntBASIC3.6□□□□□ -1.83
COL15A1P39059 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
COL15A1P39059 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
COL15A1P39059 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
COL15A1P39059 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
COL15A1P39059 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.59□□□□□ -1.83
COL15A1P39059 RNU4-20P-201ENST00000365601 151 ntBASIC3.59□□□□□ -1.83
COL15A1P39059 RNU6-38P-201ENST00000384085 107 ntBASIC3.59□□□□□ -1.83
COL15A1P39059 MIR591-201ENST00000385290 95 ntBASIC3.59□□□□□ -1.83
COL15A1P39059 AL139039.1-201ENST00000401900 692 ntBASIC3.59□□□□□ -1.83
COL15A1P39059 AL138827.1-201ENST00000402666 306 ntBASIC3.59□□□□□ -1.83
COL15A1P39059 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.59□□□□□ -1.83
COL15A1P39059 ARL5AP1-201ENST00000418991 388 ntBASIC3.59□□□□□ -1.83
COL15A1P39059 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.59□□□□□ -1.83
COL15A1P39059 ZNF863P-201ENST00000426746 417 ntBASIC3.59□□□□□ -1.83
COL15A1P39059 SRIP2-201ENST00000428470 166 ntBASIC3.59□□□□□ -1.83
COL15A1P39059 AC007919.1-201ENST00000429380 217 ntBASIC3.59□□□□□ -1.83
COL15A1P39059 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.59□□□□□ -1.83
COL15A1P39059 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.59□□□□□ -1.83
COL15A1P39059 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.59□□□□□ -1.83
COL15A1P39059 EEF1B2P7-201ENST00000451177 676 ntBASIC3.59□□□□□ -1.83
COL15A1P39059 RNU6-333P-201ENST00000459117 107 ntBASIC3.59□□□□□ -1.83
COL15A1P39059 MTCO2P30-201ENST00000503662 364 ntBASIC3.59□□□□□ -1.83
COL15A1P39059 RNU6-507P-201ENST00000516045 100 ntBASIC3.59□□□□□ -1.83
COL15A1P39059 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.59□□□□□ -1.83
COL15A1P39059 ATP5F1P5-201ENST00000526403 760 ntBASIC3.59□□□□□ -1.83
COL15A1P39059 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.59□□□□□ -1.83
COL15A1P39059 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.59□□□□□ -1.83
COL15A1P39059 RNU6-89P-201ENST00000606519 100 ntBASIC3.59□□□□□ -1.83
COL15A1P39059 AC004832.5-201ENST00000608677 401 ntBASIC3.59□□□□□ -1.83
COL15A1P39059 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
COL15A1P39059 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
COL15A1P39059 Y_RNA.279-201ENST00000364763 95 ntBASIC3.58□□□□□ -1.84
COL15A1P39059 Y_RNA.373-201ENST00000365600 103 ntBASIC3.58□□□□□ -1.84
COL15A1P39059 RNU6-767P-201ENST00000384132 107 ntBASIC3.58□□□□□ -1.84
COL15A1P39059 RNU6-1009P-201ENST00000390996 107 ntBASIC3.58□□□□□ -1.84
COL15A1P39059 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL15A1P39059 AL592114.1-201ENST00000403842 483 ntBASIC3.58□□□□□ -1.84
COL15A1P39059 AL591034.1-201ENST00000407447 340 ntBASIC3.58□□□□□ -1.84
COL15A1P39059 Y_RNA.615-201ENST00000410769 117 ntBASIC3.58□□□□□ -1.84
COL15A1P39059 RNA5SP21-201ENST00000410917 96 ntBASIC3.58□□□□□ -1.84
COL15A1P39059 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.58□□□□□ -1.84
COL15A1P39059 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.58□□□□□ -1.84
COL15A1P39059 NDUFB4P7-201ENST00000423198 363 ntBASIC3.58□□□□□ -1.84
COL15A1P39059 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.58□□□□□ -1.84
COL15A1P39059 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.58□□□□□ -1.84
COL15A1P39059 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.58□□□□□ -1.84
COL15A1P39059 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.58□□□□□ -1.84
COL15A1P39059 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.58□□□□□ -1.84
COL15A1P39059 RPL7P12-201ENST00000446719 750 ntBASIC3.58□□□□□ -1.84
COL15A1P39059 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.58□□□□□ -1.84
COL15A1P39059 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.58□□□□□ -1.84
COL15A1P39059 SCARNA18-201ENST00000459004 134 ntBASIC3.58□□□□□ -1.84
COL15A1P39059 AC007547.1-201ENST00000462177 490 ntBASIC3.58□□□□□ -1.84
COL15A1P39059 AC087588.1-201ENST00000462203 316 ntBASIC3.58□□□□□ -1.84
COL15A1P39059 RN7SL330P-201ENST00000469709 307 ntBASIC3.58□□□□□ -1.84
COL15A1P39059 RPS15AP34-201ENST00000487776 387 ntBASIC3.58□□□□□ -1.84
COL15A1P39059 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.58□□□□□ -1.84
COL15A1P39059 RNU6-1038P-201ENST00000516516 104 ntBASIC3.58□□□□□ -1.84
COL15A1P39059 RNA5SP291-201ENST00000517222 105 ntBASIC3.58□□□□□ -1.84
COL15A1P39059 AC023050.3-201ENST00000541142 333 ntBASIC3.58□□□□□ -1.84
COL15A1P39059 AC078814.3-201ENST00000553036 491 ntBASIC3.58□□□□□ -1.84
COL15A1P39059 MIR3186-201ENST00000577404 85 ntBASIC3.58□□□□□ -1.84
COL15A1P39059 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.58□□□□□ -1.84
COL15A1P39059 MIR7111-201ENST00000619751 72 ntBASIC3.58□□□□□ -1.84
COL15A1P39059 AC090617.10-201ENST00000624308 134 ntBASIC3.58□□□□□ -1.84
COL15A1P39059 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
COL15A1P39059 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
COL15A1P39059 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
COL15A1P39059 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
COL15A1P39059 RNU6-512P-201ENST00000364438 103 ntBASIC3.57□□□□□ -1.84
COL15A1P39059 MIR514A2-201ENST00000385131 88 ntBASIC3.57□□□□□ -1.84
COL15A1P39059 MIR514A3-201ENST00000385132 88 ntBASIC3.57□□□□□ -1.84
COL15A1P39059 RAP1BP3-201ENST00000407180 549 ntBASIC3.57□□□□□ -1.84
COL15A1P39059 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.57□□□□□ -1.84
COL15A1P39059 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.57□□□□□ -1.84
COL15A1P39059 SNRPEP8-201ENST00000442866 260 ntBASIC3.57□□□□□ -1.84
COL15A1P39059 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.57□□□□□ -1.84
COL15A1P39059 SSXP4-201ENST00000451349 245 ntBASIC3.57□□□□□ -1.84
COL15A1P39059 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.57□□□□□ -1.84
COL15A1P39059 RPL21P41-201ENST00000459863 264 ntBASIC3.57□□□□□ -1.84
COL15A1P39059 HMGN2P26-201ENST00000463169 339 ntBASIC3.57□□□□□ -1.84
COL15A1P39059 HMGN1P12-201ENST00000499125 195 ntBASIC3.57□□□□□ -1.84
COL15A1P39059 AC091951.2-201ENST00000500762 203 ntBASIC3.57□□□□□ -1.84
COL15A1P39059 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.57□□□□□ -1.84
COL15A1P39059 BTF3P12-201ENST00000519620 469 ntBASIC3.57□□□□□ -1.84
COL15A1P39059 AC243972.3-201ENST00000539655 198 ntBASIC3.57□□□□□ -1.84
COL15A1P39059 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.57□□□□□ -1.84
COL15A1P39059 MIR5583-1-201ENST00000580941 59 ntBASIC3.57□□□□□ -1.84
COL15A1P39059 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
COL15A1P39059 LARP7P1-201ENST00000605576 316 ntBASIC3.57□□□□□ -1.84
COL15A1P39059 MIR15A-201ENST00000607334 83 ntBASIC3.57□□□□□ -1.84
COL15A1P39059 XIST_intron.1-201ENST00000619444 68 ntBASIC3.57□□□□□ -1.84
COL15A1P39059 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms