Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 RNY1P10-201ENST00000363268 113 ntBASIC0.48□□□□□ -2.33
SNCAP37840 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.48□□□□□ -2.33
SNCAP37840 RNU6-878P-201ENST00000384578 110 ntBASIC0.48□□□□□ -2.33
SNCAP37840 CCDC58P2-201ENST00000417131 366 ntBASIC0.48□□□□□ -2.33
SNCAP37840 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.48□□□□□ -2.33
SNCAP37840 NANOGP2-201ENST00000435391 727 ntBASIC0.48□□□□□ -2.33
SNCAP37840 SNRPEP9-201ENST00000436794 238 ntBASIC0.48□□□□□ -2.33
SNCAP37840 MTND1P18-201ENST00000448191 573 ntBASIC0.48□□□□□ -2.33
SNCAP37840 USP9YP34-201ENST00000453983 808 ntBASIC0.48□□□□□ -2.33
SNCAP37840 RPS27P22-201ENST00000478056 241 ntBASIC0.48□□□□□ -2.33
SNCAP37840 RNVU1-2-201ENST00000516326 135 ntBASIC0.48□□□□□ -2.33
SNCAP37840 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
SNCAP37840 AC136628.3-201ENST00000521868 290 ntBASIC0.48□□□□□ -2.33
SNCAP37840 AP003484.1-201ENST00000530974 250 ntBASIC0.48□□□□□ -2.33
SNCAP37840 PSMA3P-201ENST00000555485 635 ntBASIC0.48□□□□□ -2.33
SNCAP37840 LINC00557-201ENST00000563184 1279 ntBASIC0.48□□□□□ -2.33
SNCAP37840 AC109446.2-201ENST00000567872 497 ntBASIC0.48□□□□□ -2.33
SNCAP37840 WISP1-OT1-201ENST00000602893 642 ntBASIC0.48□□□□□ -2.33
SNCAP37840 AC016727.1-205ENST00000605437 569 ntBASIC0.48□□□□□ -2.33
SNCAP37840 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.48□□□□□ -2.33
SNCAP37840 AL138713.1-201ENST00000624026 2130 ntBASIC0.48□□□□□ -2.33
SNCAP37840 SEC63P2-201ENST00000503863 1939 ntBASIC0.48□□□□□ -2.33
SNCAP37840 SNORA4.1-201ENST00000364263 144 ntBASIC0.47□□□□□ -2.33
SNCAP37840 RNU6-17P-201ENST00000384245 107 ntBASIC0.47□□□□□ -2.33
SNCAP37840 RNU6-611P-201ENST00000384276 104 ntBASIC0.47□□□□□ -2.33
SNCAP37840 RNU6-18P-201ENST00000384527 107 ntBASIC0.47□□□□□ -2.33
SNCAP37840 RNU6-14P-201ENST00000384630 106 ntBASIC0.47□□□□□ -2.33
SNCAP37840 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
SNCAP37840 AL117342.1-201ENST00000404861 406 ntBASIC0.47□□□□□ -2.33
SNCAP37840 NCOR1P3-201ENST00000420479 303 ntBASIC0.47□□□□□ -2.33
SNCAP37840 MOB1AP2-201ENST00000446060 614 ntBASIC0.47□□□□□ -2.33
SNCAP37840 SNORA25.11-201ENST00000515935 105 ntBASIC0.47□□□□□ -2.33
SNCAP37840 RNU6-991P-201ENST00000516168 107 ntBASIC0.47□□□□□ -2.33
SNCAP37840 AC104997.1-201ENST00000519761 717 ntBASIC0.47□□□□□ -2.33
SNCAP37840 ARL2BPP5-201ENST00000523141 481 ntBASIC0.47□□□□□ -2.33
SNCAP37840 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.47□□□□□ -2.33
SNCAP37840 AC233266.2-201ENST00000567067 528 ntBASIC0.47□□□□□ -2.33
SNCAP37840 ADAM3B-201ENST00000569937 840 ntBASIC0.47□□□□□ -2.33
SNCAP37840 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC0.47□□□□□ -2.33
SNCAP37840 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.47□□□□□ -2.33
SNCAP37840 AC239868.4-201ENST00000608318 671 ntBASIC0.47□□□□□ -2.33
SNCAP37840 AL365204.3-201ENST00000612448 685 ntBASIC0.47□□□□□ -2.33
SNCAP37840 AC107075.1-201ENST00000613695 314 ntBASIC0.47□□□□□ -2.33
SNCAP37840 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.47□□□□□ -2.33
SNCAP37840 AC017037.3-201ENST00000625016 472 ntBASIC0.47□□□□□ -2.33
SNCAP37840 MIR337-201ENST00000362281 93 ntBASIC0.46□□□□□ -2.34
SNCAP37840 SNORA25-201ENST00000384384 134 ntBASIC0.46□□□□□ -2.34
SNCAP37840 CCNG1P1-201ENST00000406783 885 ntBASIC0.46□□□□□ -2.34
SNCAP37840 RNU6-321P-201ENST00000410912 106 ntBASIC0.46□□□□□ -2.34
SNCAP37840 MTCO3P5-201ENST00000433620 714 ntBASIC0.46□□□□□ -2.34
SNCAP37840 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC0.46□□□□□ -2.34
SNCAP37840 PRELID3BP1-201ENST00000457142 540 ntBASIC0.46□□□□□ -2.34
SNCAP37840 RAP1BP2-201ENST00000478270 544 ntBASIC0.46□□□□□ -2.34
SNCAP37840 AC108729.1-201ENST00000487812 947 ntBASIC0.46□□□□□ -2.34
SNCAP37840 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.46□□□□□ -2.34
SNCAP37840 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.46□□□□□ -2.34
SNCAP37840 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.46□□□□□ -2.34
SNCAP37840 HSPE1P4-201ENST00000550617 308 ntBASIC0.46□□□□□ -2.34
SNCAP37840 AC008015.1-201ENST00000555505 465 ntBASIC0.46□□□□□ -2.34
SNCAP37840 SUB1P4-201ENST00000566062 339 ntBASIC0.46□□□□□ -2.34
SNCAP37840 AC012213.3-201ENST00000577199 777 ntBASIC0.46□□□□□ -2.34
SNCAP37840 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC0.46□□□□□ -2.34
SNCAP37840 AL022345.2-201ENST00000606307 135 ntBASIC0.46□□□□□ -2.34
SNCAP37840 BX284668.6-201ENST00000606899 438 ntBASIC0.46□□□□□ -2.34
SNCAP37840 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.46□□□□□ -2.34
SNCAP37840 AL359757.2-201ENST00000624309 274 ntBASIC0.46□□□□□ -2.34
SNCAP37840 NACAP2-201ENST00000318548 624 ntBASIC0.45□□□□□ -2.34
SNCAP37840 RNU6-414P-201ENST00000363705 104 ntBASIC0.45□□□□□ -2.34
SNCAP37840 Y_RNA.338-201ENST00000365320 114 ntBASIC0.45□□□□□ -2.34
SNCAP37840 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.45□□□□□ -2.34
SNCAP37840 MIR1302-8-201ENST00000408342 128 ntBASIC0.45□□□□□ -2.34
SNCAP37840 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.45□□□□□ -2.34
SNCAP37840 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.45□□□□□ -2.34
SNCAP37840 AL591043.1-201ENST00000432461 424 ntBASIC0.45□□□□□ -2.34
SNCAP37840 JTBP1-201ENST00000441314 247 ntBASIC0.45□□□□□ -2.34
SNCAP37840 HSPE1P13-201ENST00000451143 297 ntBASIC0.45□□□□□ -2.34
SNCAP37840 AL157398.1-201ENST00000452981 186 ntBASIC0.45□□□□□ -2.34
SNCAP37840 AC108059.3-201ENST00000456388 214 ntBASIC0.45□□□□□ -2.34
SNCAP37840 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.45□□□□□ -2.34
SNCAP37840 RPL26P26-201ENST00000480251 434 ntBASIC0.45□□□□□ -2.34
SNCAP37840 PTP4A1P4-201ENST00000512479 322 ntBASIC0.45□□□□□ -2.34
SNCAP37840 RNA5SP102-201ENST00000516865 106 ntBASIC0.45□□□□□ -2.34
SNCAP37840 NRON-201ENST00000517270 370 ntBASIC0.45□□□□□ -2.34
SNCAP37840 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.45□□□□□ -2.34
SNCAP37840 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.45□□□□□ -2.34
SNCAP37840 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC0.45□□□□□ -2.34
SNCAP37840 SULT1C2P1-202ENST00000562418 459 ntBASIC0.45□□□□□ -2.34
SNCAP37840 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.45□□□□□ -2.34
SNCAP37840 AC087045.1-201ENST00000605856 382 ntBASIC0.45□□□□□ -2.34
SNCAP37840 AC242628.1-201ENST00000606810 391 ntBASIC0.45□□□□□ -2.34
SNCAP37840 MIR8065-201ENST00000620577 100 ntBASIC0.45□□□□□ -2.34
SNCAP37840 MIR8063-201ENST00000621930 81 ntBASIC0.45□□□□□ -2.34
SNCAP37840 MIR4275-201ENST00000636486 87 ntBASIC0.45□□□□□ -2.34
SNCAP37840 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.44□□□□□ -2.34
SNCAP37840 RNU6-1032P-201ENST00000384100 107 ntBASIC0.44□□□□□ -2.34
SNCAP37840 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
SNCAP37840 Z73417.1-201ENST00000447373 778 ntBASIC0.44□□□□□ -2.34
SNCAP37840 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.44□□□□□ -2.34
SNCAP37840 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.44□□□□□ -2.34
SNCAP37840 AC034244.1-201ENST00000507687 207 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms