Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CASQ1P31415 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.55□□□□□ -2.16
CASQ1P31415 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.55□□□□□ -2.16
CASQ1P31415 NCOR1P3-201ENST00000420479 303 ntBASIC1.55□□□□□ -2.16
CASQ1P31415 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.55□□□□□ -2.16
CASQ1P31415 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.55□□□□□ -2.16
CASQ1P31415 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.55□□□□□ -2.16
CASQ1P31415 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.55□□□□□ -2.16
CASQ1P31415 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.55□□□□□ -2.16
CASQ1P31415 AC025465.3-201ENST00000510570 311 ntBASIC1.55□□□□□ -2.16
CASQ1P31415 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.55□□□□□ -2.16
CASQ1P31415 AC117532.1-201ENST00000514638 323 ntBASIC1.55□□□□□ -2.16
CASQ1P31415 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
CASQ1P31415 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.55□□□□□ -2.16
CASQ1P31415 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.55□□□□□ -2.16
CASQ1P31415 AP005597.4-201ENST00000526762 229 ntBASIC1.55□□□□□ -2.16
CASQ1P31415 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.55□□□□□ -2.16
CASQ1P31415 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.55□□□□□ -2.16
CASQ1P31415 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
CASQ1P31415 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CASQ1P31415 RNU6-1274P-201ENST00000384557 107 ntBASIC1.54□□□□□ -2.16
CASQ1P31415 MIR186-201ENST00000384988 86 ntBASIC1.54□□□□□ -2.16
CASQ1P31415 MIR483-201ENST00000385070 76 ntBASIC1.54□□□□□ -2.16
CASQ1P31415 MIR1323-201ENST00000408090 73 ntBASIC1.54□□□□□ -2.16
CASQ1P31415 AL358453.1-201ENST00000422522 250 ntBASIC1.54□□□□□ -2.16
CASQ1P31415 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.54□□□□□ -2.16
CASQ1P31415 SNRPEP7-201ENST00000438350 220 ntBASIC1.54□□□□□ -2.16
CASQ1P31415 AC245517.4-201ENST00000448601 281 ntBASIC1.54□□□□□ -2.16
CASQ1P31415 RNU7-59P-201ENST00000459101 61 ntBASIC1.54□□□□□ -2.16
CASQ1P31415 AC108729.1-201ENST00000487812 947 ntBASIC1.54□□□□□ -2.16
CASQ1P31415 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC1.54□□□□□ -2.16
CASQ1P31415 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.54□□□□□ -2.16
CASQ1P31415 DEFB131D-201ENST00000526803 184 ntBASIC1.54□□□□□ -2.16
CASQ1P31415 AC126365.2-201ENST00000580630 379 ntBASIC1.54□□□□□ -2.16
CASQ1P31415 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.54□□□□□ -2.16
CASQ1P31415 uc_338.15-201ENST00000615470 191 ntBASIC1.54□□□□□ -2.16
CASQ1P31415 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.54□□□□□ -2.16
CASQ1P31415 AC092125.1-201ENST00000562568 1995 ntBASIC1.54□□□□□ -2.16
CASQ1P31415 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
CASQ1P31415 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.53□□□□□ -2.16
CASQ1P31415 RNU6-439P-201ENST00000384188 106 ntBASIC1.53□□□□□ -2.16
CASQ1P31415 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CASQ1P31415 FTH1P15-201ENST00000406984 280 ntBASIC1.53□□□□□ -2.16
CASQ1P31415 MTND3P20-201ENST00000407663 186 ntBASIC1.53□□□□□ -2.16
CASQ1P31415 TIMM9P2-201ENST00000419324 266 ntBASIC1.53□□□□□ -2.16
CASQ1P31415 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.53□□□□□ -2.16
CASQ1P31415 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.53□□□□□ -2.16
CASQ1P31415 AC012308.1-201ENST00000451232 178 ntBASIC1.53□□□□□ -2.16
CASQ1P31415 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.53□□□□□ -2.16
CASQ1P31415 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.53□□□□□ -2.16
CASQ1P31415 AC009902.1-201ENST00000519351 183 ntBASIC1.53□□□□□ -2.16
CASQ1P31415 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.53□□□□□ -2.16
CASQ1P31415 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.53□□□□□ -2.16
CASQ1P31415 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.53□□□□□ -2.16
CASQ1P31415 AK6P1-201ENST00000540219 478 ntBASIC1.53□□□□□ -2.16
CASQ1P31415 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.53□□□□□ -2.16
CASQ1P31415 BNIP3P27-201ENST00000599991 412 ntBASIC1.53□□□□□ -2.16
CASQ1P31415 AP001981.2-201ENST00000603241 418 ntBASIC1.53□□□□□ -2.16
CASQ1P31415 BNIP3P9-201ENST00000603714 553 ntBASIC1.53□□□□□ -2.16
CASQ1P31415 AC123912.5-201ENST00000605470 343 ntBASIC1.53□□□□□ -2.16
CASQ1P31415 AC233981.2-201ENST00000611524 1614 ntBASIC1.52□□□□□ -2.17
CASQ1P31415 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CASQ1P31415 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
CASQ1P31415 MIR517C-201ENST00000385103 95 ntBASIC1.52□□□□□ -2.17
CASQ1P31415 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.52□□□□□ -2.17
CASQ1P31415 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC1.52□□□□□ -2.17
CASQ1P31415 AC005094.1-201ENST00000440420 368 ntBASIC1.52□□□□□ -2.17
CASQ1P31415 CR769776.1-201ENST00000441254 787 ntBASIC1.52□□□□□ -2.17
CASQ1P31415 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.52□□□□□ -2.17
CASQ1P31415 AC079448.1-201ENST00000449377 373 ntBASIC1.52□□□□□ -2.17
CASQ1P31415 AC027338.1-201ENST00000514840 825 ntBASIC1.52□□□□□ -2.17
CASQ1P31415 RNA5SP445-201ENST00000515889 115 ntBASIC1.52□□□□□ -2.17
CASQ1P31415 RNU6-334P-201ENST00000517072 102 ntBASIC1.52□□□□□ -2.17
CASQ1P31415 AP003034.1-201ENST00000534621 422 ntBASIC1.52□□□□□ -2.17
CASQ1P31415 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.52□□□□□ -2.17
CASQ1P31415 AC104072.1-201ENST00000568817 668 ntBASIC1.52□□□□□ -2.17
CASQ1P31415 AC002400.1-201ENST00000569310 726 ntBASIC1.52□□□□□ -2.17
CASQ1P31415 MIR4255-201ENST00000579351 72 ntBASIC1.52□□□□□ -2.17
CASQ1P31415 VN1R83P-201ENST00000595685 445 ntBASIC1.52□□□□□ -2.17
CASQ1P31415 AC012065.4-201ENST00000602445 679 ntBASIC1.52□□□□□ -2.17
CASQ1P31415 AC090186.1-201ENST00000605991 572 ntBASIC1.52□□□□□ -2.17
CASQ1P31415 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.52□□□□□ -2.17
CASQ1P31415 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.52□□□□□ -2.17
CASQ1P31415 PCMTD1P7-201ENST00000634506 357 ntBASIC1.52□□□□□ -2.17
CASQ1P31415 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.52□□□□□ -2.17
CASQ1P31415 HAUS6P2-201ENST00000433254 2404 ntBASIC1.52□□□□□ -2.17
CASQ1P31415 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.52□□□□□ -2.17
CASQ1P31415 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CASQ1P31415 RNU6-529P-201ENST00000363383 104 ntBASIC1.51□□□□□ -2.17
CASQ1P31415 RNU6-939P-201ENST00000384634 107 ntBASIC1.51□□□□□ -2.17
CASQ1P31415 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CASQ1P31415 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CASQ1P31415 AL627390.1-201ENST00000396055 340 ntBASIC1.51□□□□□ -2.17
CASQ1P31415 RNU6-1140P-201ENST00000410517 106 ntBASIC1.51□□□□□ -2.17
CASQ1P31415 AL354695.1-201ENST00000427935 228 ntBASIC1.51□□□□□ -2.17
CASQ1P31415 AL592045.1-201ENST00000429867 352 ntBASIC1.51□□□□□ -2.17
CASQ1P31415 USP9YP35-201ENST00000435696 412 ntBASIC1.51□□□□□ -2.17
CASQ1P31415 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.51□□□□□ -2.17
CASQ1P31415 SNRPGP13-201ENST00000442212 177 ntBASIC1.51□□□□□ -2.17
CASQ1P31415 AL078601.1-201ENST00000444542 271 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms