Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AC079140.2-201ENST00000506193 142 ntBASIC0.5□□□□□ -2.33
CLIP1P30622 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.5□□□□□ -2.33
CLIP1P30622 SNORA4.4-201ENST00000515921 135 ntBASIC0.5□□□□□ -2.33
CLIP1P30622 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.5□□□□□ -2.33
CLIP1P30622 AL356432.3-201ENST00000568952 465 ntBASIC0.5□□□□□ -2.33
CLIP1P30622 AC022387.2-201ENST00000604050 448 ntBASIC0.5□□□□□ -2.33
CLIP1P30622 AL139344.1-201ENST00000605228 195 ntBASIC0.5□□□□□ -2.33
CLIP1P30622 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.5□□□□□ -2.33
CLIP1P30622 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.5□□□□□ -2.33
CLIP1P30622 MIR6718-201ENST00000616153 80 ntBASIC0.5□□□□□ -2.33
CLIP1P30622 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
CLIP1P30622 Y_RNA.62-201ENST00000362840 99 ntBASIC0.49□□□□□ -2.33
CLIP1P30622 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC0.49□□□□□ -2.33
CLIP1P30622 AL049714.1-201ENST00000466686 347 ntBASIC0.49□□□□□ -2.33
CLIP1P30622 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.49□□□□□ -2.33
CLIP1P30622 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC0.49□□□□□ -2.33
CLIP1P30622 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC0.49□□□□□ -2.33
CLIP1P30622 AL391261.3-201ENST00000557194 520 ntBASIC0.49□□□□□ -2.33
CLIP1P30622 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.49□□□□□ -2.33
CLIP1P30622 AL138963.2-201ENST00000605137 226 ntBASIC0.49□□□□□ -2.33
CLIP1P30622 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.49□□□□□ -2.33
CLIP1P30622 MIR8074-201ENST00000615081 81 ntBASIC0.49□□□□□ -2.33
CLIP1P30622 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.49□□□□□ -2.33
CLIP1P30622 AC005832.2-201ENST00000538921 1430 ntBASIC0.49□□□□□ -2.33
CLIP1P30622 RNU1-124P-201ENST00000363861 145 ntBASIC0.48□□□□□ -2.33
CLIP1P30622 RNU1-96P-201ENST00000364163 162 ntBASIC0.48□□□□□ -2.33
CLIP1P30622 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
CLIP1P30622 RNU6-968P-201ENST00000384076 107 ntBASIC0.48□□□□□ -2.33
CLIP1P30622 MIR518D-201ENST00000385014 87 ntBASIC0.48□□□□□ -2.33
CLIP1P30622 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
CLIP1P30622 U6atac.2-201ENST00000408644 118 ntBASIC0.48□□□□□ -2.33
CLIP1P30622 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.48□□□□□ -2.33
CLIP1P30622 AC244023.1-201ENST00000426884 112 ntBASIC0.48□□□□□ -2.33
CLIP1P30622 SNORA48.9-201ENST00000516419 162 ntBASIC0.48□□□□□ -2.33
CLIP1P30622 HAUS1P3-201ENST00000523909 662 ntBASIC0.48□□□□□ -2.33
CLIP1P30622 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.48□□□□□ -2.33
CLIP1P30622 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC0.48□□□□□ -2.33
CLIP1P30622 AL132857.1-201ENST00000555180 708 ntBASIC0.48□□□□□ -2.33
CLIP1P30622 AC242498.1-201ENST00000604134 111 ntBASIC0.48□□□□□ -2.33
CLIP1P30622 AC243994.1-201ENST00000618627 109 ntBASIC0.48□□□□□ -2.33
CLIP1P30622 MIR6130-201ENST00000619419 109 ntBASIC0.48□□□□□ -2.33
CLIP1P30622 U1.36-201ENST00000620684 176 ntBASIC0.48□□□□□ -2.33
CLIP1P30622 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC0.48□□□□□ -2.33
CLIP1P30622 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.48□□□□□ -2.33
CLIP1P30622 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.47□□□□□ -2.33
CLIP1P30622 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.47□□□□□ -2.33
CLIP1P30622 AL449283.1-202ENST00000418249 604 ntBASIC0.47□□□□□ -2.33
CLIP1P30622 AL512844.2-201ENST00000433990 593 ntBASIC0.47□□□□□ -2.33
CLIP1P30622 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.47□□□□□ -2.33
CLIP1P30622 EIF4A1P12-201ENST00000551910 141 ntBASIC0.47□□□□□ -2.33
CLIP1P30622 POLR2KP1-201ENST00000553226 168 ntBASIC0.47□□□□□ -2.33
CLIP1P30622 VN1R82P-201ENST00000601481 356 ntBASIC0.47□□□□□ -2.33
CLIP1P30622 AC005021.1-201ENST00000608730 355 ntBASIC0.47□□□□□ -2.33
CLIP1P30622 AC040168.1-201ENST00000623594 991 ntBASIC0.47□□□□□ -2.33
CLIP1P30622 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
CLIP1P30622 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.47□□□□□ -2.33
CLIP1P30622 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC0.47□□□□□ -2.33
CLIP1P30622 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.47□□□□□ -2.33
CLIP1P30622 MRPS17P3-201ENST00000465453 385 ntBASIC0.47□□□□□ -2.33
CLIP1P30622 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.47□□□□□ -2.33
CLIP1P30622 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.47□□□□□ -2.33
CLIP1P30622 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC0.47□□□□□ -2.33
CLIP1P30622 AP003034.1-201ENST00000534621 422 ntBASIC0.47□□□□□ -2.33
CLIP1P30622 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.47□□□□□ -2.33
CLIP1P30622 AC079791.1-201ENST00000605356 973 ntBASIC0.47□□□□□ -2.33
CLIP1P30622 AL589743.7-201ENST00000612637 233 ntBASIC0.47□□□□□ -2.33
CLIP1P30622 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.47□□□□□ -2.33
CLIP1P30622 OR5T3-201ENST00000303059 1023 ntBASIC0.46□□□□□ -2.34
CLIP1P30622 AC138393.1-203ENST00000327086 343 ntBASIC0.46□□□□□ -2.34
CLIP1P30622 RNU6-271P-201ENST00000363858 105 ntBASIC0.46□□□□□ -2.34
CLIP1P30622 MTCO1P56-201ENST00000401674 224 ntBASIC0.46□□□□□ -2.34
CLIP1P30622 RNU2-36P-201ENST00000410361 191 ntBASIC0.46□□□□□ -2.34
CLIP1P30622 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC0.46□□□□□ -2.34
CLIP1P30622 ZNF680P1-201ENST00000436625 1469 ntBASIC0.46□□□□□ -2.34
CLIP1P30622 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.46□□□□□ -2.34
CLIP1P30622 AC104164.3-201ENST00000467363 1258 ntBASIC0.46□□□□□ -2.34
CLIP1P30622 AC104057.1-201ENST00000515547 497 ntBASIC0.46□□□□□ -2.34
CLIP1P30622 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC0.46□□□□□ -2.34
CLIP1P30622 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC0.46□□□□□ -2.34
CLIP1P30622 AL391597.1-201ENST00000618707 694 ntBASIC0.46□□□□□ -2.34
CLIP1P30622 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
CLIP1P30622 AP003072.5-201ENST00000623872 773 ntBASIC0.46□□□□□ -2.34
CLIP1P30622 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
CLIP1P30622 RNU6-98P-201ENST00000384173 107 ntBASIC0.45□□□□□ -2.34
CLIP1P30622 RNU6-439P-201ENST00000384188 106 ntBASIC0.45□□□□□ -2.34
CLIP1P30622 RNU6-750P-201ENST00000390946 107 ntBASIC0.45□□□□□ -2.34
CLIP1P30622 MRPL35P1-201ENST00000404272 572 ntBASIC0.45□□□□□ -2.34
CLIP1P30622 UBE2V1P4-201ENST00000425374 344 ntBASIC0.45□□□□□ -2.34
CLIP1P30622 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.45□□□□□ -2.34
CLIP1P30622 TRAPPC13P1-201ENST00000435991 1062 ntBASIC0.45□□□□□ -2.34
CLIP1P30622 RPS15AP5-201ENST00000436276 388 ntBASIC0.45□□□□□ -2.34
CLIP1P30622 RSU1P2-202ENST00000437884 485 ntBASIC0.45□□□□□ -2.34
CLIP1P30622 PGBD4P5-201ENST00000445958 426 ntBASIC0.45□□□□□ -2.34
CLIP1P30622 SNORD116-28-201ENST00000516123 91 ntBASIC0.45□□□□□ -2.34
CLIP1P30622 RNU4-77P-201ENST00000516692 156 ntBASIC0.45□□□□□ -2.34
CLIP1P30622 AP000403.1-201ENST00000603349 851 ntBASIC0.45□□□□□ -2.34
CLIP1P30622 AC009233.1-201ENST00000616477 371 ntBASIC0.45□□□□□ -2.34
CLIP1P30622 AC073968.1-201ENST00000618594 637 ntBASIC0.45□□□□□ -2.34
CLIP1P30622 AC006213.5-201ENST00000619673 288 ntBASIC0.45□□□□□ -2.34
CLIP1P30622 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms