Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 Y_RNA.324-201ENST00000365165 102 ntBASIC2.98□□□□□ -1.93
ABCD3P28288 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.98□□□□□ -1.93
ABCD3P28288 Y_RNA.573-201ENST00000384763 105 ntBASIC2.98□□□□□ -1.93
ABCD3P28288 RNU6-908P-201ENST00000410160 94 ntBASIC2.98□□□□□ -1.93
ABCD3P28288 RN7SKP220-201ENST00000410611 288 ntBASIC2.98□□□□□ -1.93
ABCD3P28288 FCF1P9-201ENST00000412546 282 ntBASIC2.98□□□□□ -1.93
ABCD3P28288 AL513477.1-202ENST00000417061 214 ntBASIC2.98□□□□□ -1.93
ABCD3P28288 MTCO1P20-201ENST00000425366 358 ntBASIC2.98□□□□□ -1.93
ABCD3P28288 USP9YP18-201ENST00000425912 695 ntBASIC2.98□□□□□ -1.93
ABCD3P28288 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.98□□□□□ -1.93
ABCD3P28288 AL513043.1-201ENST00000439124 535 ntBASIC2.98□□□□□ -1.93
ABCD3P28288 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.98□□□□□ -1.93
ABCD3P28288 AC009296.1-201ENST00000443146 155 ntBASIC2.98□□□□□ -1.93
ABCD3P28288 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.98□□□□□ -1.93
ABCD3P28288 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.98□□□□□ -1.93
ABCD3P28288 MRPL42P6-201ENST00000486397 371 ntBASIC2.98□□□□□ -1.93
ABCD3P28288 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.98□□□□□ -1.93
ABCD3P28288 AC114781.4-201ENST00000513707 639 ntBASIC2.98□□□□□ -1.93
ABCD3P28288 Y_RNA.687-201ENST00000516558 91 ntBASIC2.98□□□□□ -1.93
ABCD3P28288 AC069113.1-201ENST00000517763 267 ntBASIC2.98□□□□□ -1.93
ABCD3P28288 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.98□□□□□ -1.93
ABCD3P28288 MIR5680-201ENST00000577577 84 ntBASIC2.98□□□□□ -1.93
ABCD3P28288 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.98□□□□□ -1.93
ABCD3P28288 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.98□□□□□ -1.93
ABCD3P28288 AC004832.5-201ENST00000608677 401 ntBASIC2.98□□□□□ -1.93
ABCD3P28288 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
ABCD3P28288 AC090617.7-201ENST00000623952 126 ntBASIC2.98□□□□□ -1.93
ABCD3P28288 AC073476.4-201ENST00000628409 72 ntBASIC2.98□□□□□ -1.93
ABCD3P28288 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
ABCD3P28288 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.97□□□□□ -1.93
ABCD3P28288 AC027514.1-201ENST00000588561 1603 ntBASIC2.97□□□□□ -1.93
ABCD3P28288 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
ABCD3P28288 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.97□□□□□ -1.93
ABCD3P28288 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.97□□□□□ -1.93
ABCD3P28288 MIR148B-201ENST00000362252 99 ntBASIC2.97□□□□□ -1.93
ABCD3P28288 RNA5SP383-201ENST00000362934 120 ntBASIC2.97□□□□□ -1.93
ABCD3P28288 RNU4-66P-201ENST00000365199 138 ntBASIC2.97□□□□□ -1.93
ABCD3P28288 SNORA70.4-201ENST00000365509 134 ntBASIC2.97□□□□□ -1.93
ABCD3P28288 Y_RNA.450-201ENST00000384198 113 ntBASIC2.97□□□□□ -1.93
ABCD3P28288 Y_RNA.554-201ENST00000384672 102 ntBASIC2.97□□□□□ -1.93
ABCD3P28288 AL513475.1-201ENST00000406602 315 ntBASIC2.97□□□□□ -1.93
ABCD3P28288 BX682237.1-201ENST00000415016 335 ntBASIC2.97□□□□□ -1.93
ABCD3P28288 AL365400.1-201ENST00000431854 640 ntBASIC2.97□□□□□ -1.93
ABCD3P28288 AC006028.1-201ENST00000438379 402 ntBASIC2.97□□□□□ -1.93
ABCD3P28288 snoU109.2-201ENST00000459316 135 ntBASIC2.97□□□□□ -1.93
ABCD3P28288 MTCO3P38-201ENST00000468910 766 ntBASIC2.97□□□□□ -1.93
ABCD3P28288 RN7SL283P-201ENST00000489055 303 ntBASIC2.97□□□□□ -1.93
ABCD3P28288 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.97□□□□□ -1.93
ABCD3P28288 SCARNA17.1-201ENST00000516211 143 ntBASIC2.97□□□□□ -1.93
ABCD3P28288 SCARNA17.2-201ENST00000516334 143 ntBASIC2.97□□□□□ -1.93
ABCD3P28288 RN7SKP282-201ENST00000516824 299 ntBASIC2.97□□□□□ -1.93
ABCD3P28288 CENPUP1-201ENST00000526649 1202 ntBASIC2.97□□□□□ -1.93
ABCD3P28288 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.97□□□□□ -1.93
ABCD3P28288 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.97□□□□□ -1.93
ABCD3P28288 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.97□□□□□ -1.93
ABCD3P28288 AC009163.5-201ENST00000575421 637 ntBASIC2.97□□□□□ -1.93
ABCD3P28288 MIR2682-201ENST00000580305 110 ntBASIC2.97□□□□□ -1.93
ABCD3P28288 MIR5583-1-201ENST00000580941 59 ntBASIC2.97□□□□□ -1.93
ABCD3P28288 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.97□□□□□ -1.93
ABCD3P28288 AL670379.10-201ENST00000604330 253 ntBASIC2.97□□□□□ -1.93
ABCD3P28288 AC019159.1-201ENST00000605094 187 ntBASIC2.97□□□□□ -1.93
ABCD3P28288 AL670379.9-201ENST00000605428 253 ntBASIC2.97□□□□□ -1.93
ABCD3P28288 RNU6-91P-201ENST00000607774 107 ntBASIC2.97□□□□□ -1.93
ABCD3P28288 AC096577.2-201ENST00000611455 153 ntBASIC2.97□□□□□ -1.93
ABCD3P28288 AC011890.2-201ENST00000613393 294 ntBASIC2.97□□□□□ -1.93
ABCD3P28288 SCARNA17.4-201ENST00000614296 143 ntBASIC2.97□□□□□ -1.93
ABCD3P28288 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
ABCD3P28288 AC010378.1-201ENST00000619270 362 ntBASIC2.97□□□□□ -1.93
ABCD3P28288 MIR3529-201ENST00000637713 78 ntBASIC2.97□□□□□ -1.93
ABCD3P28288 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
ABCD3P28288 HAUS6P2-201ENST00000433254 2404 ntBASIC2.97□□□□□ -1.93
ABCD3P28288 AC026241.1-201ENST00000517873 2142 ntBASIC2.96□□□□□ -1.93
ABCD3P28288 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.96□□□□□ -1.94
ABCD3P28288 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
ABCD3P28288 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.96□□□□□ -1.94
ABCD3P28288 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
ABCD3P28288 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
ABCD3P28288 RNY3P3-201ENST00000363816 102 ntBASIC2.96□□□□□ -1.94
ABCD3P28288 RNU4-12P-201ENST00000365233 139 ntBASIC2.96□□□□□ -1.94
ABCD3P28288 FTH1P15-201ENST00000406984 280 ntBASIC2.96□□□□□ -1.94
ABCD3P28288 RNU4-47P-201ENST00000410876 114 ntBASIC2.96□□□□□ -1.94
ABCD3P28288 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.96□□□□□ -1.94
ABCD3P28288 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.96□□□□□ -1.94
ABCD3P28288 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.96□□□□□ -1.94
ABCD3P28288 RPL7P10-201ENST00000417407 739 ntBASIC2.96□□□□□ -1.94
ABCD3P28288 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.96□□□□□ -1.94
ABCD3P28288 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.96□□□□□ -1.94
ABCD3P28288 AL353705.1-201ENST00000433468 480 ntBASIC2.96□□□□□ -1.94
ABCD3P28288 AL121601.2-201ENST00000438019 707 ntBASIC2.96□□□□□ -1.94
ABCD3P28288 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.96□□□□□ -1.94
ABCD3P28288 CALM1P1-201ENST00000442082 433 ntBASIC2.96□□□□□ -1.94
ABCD3P28288 Z96811.1-201ENST00000445880 108 ntBASIC2.96□□□□□ -1.94
ABCD3P28288 BX510359.1-201ENST00000456973 237 ntBASIC2.96□□□□□ -1.94
ABCD3P28288 DYNLL1P5-201ENST00000467158 270 ntBASIC2.96□□□□□ -1.94
ABCD3P28288 AC109925.1-201ENST00000478069 331 ntBASIC2.96□□□□□ -1.94
ABCD3P28288 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
ABCD3P28288 CCDC34P1-201ENST00000507441 517 ntBASIC2.96□□□□□ -1.94
ABCD3P28288 SNORA64.4-201ENST00000516632 81 ntBASIC2.96□□□□□ -1.94
ABCD3P28288 RPL7P20-201ENST00000520308 745 ntBASIC2.96□□□□□ -1.94
ABCD3P28288 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms