Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.02□□□□□ -1.77
VAMP1P23763 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
VAMP1P23763 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.02□□□□□ -1.77
VAMP1P23763 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VAMP1P23763 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.02□□□□□ -1.77
VAMP1P23763 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
VAMP1P23763 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
VAMP1P23763 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.01□□□□□ -1.77
VAMP1P23763 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
VAMP1P23763 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VAMP1P23763 RNU4-50P-201ENST00000364361 141 ntBASIC4.01□□□□□ -1.77
VAMP1P23763 SDHDP6-201ENST00000414693 480 ntBASIC4.01□□□□□ -1.77
VAMP1P23763 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC4.01□□□□□ -1.77
VAMP1P23763 AC112492.4-201ENST00000456549 352 ntBASIC4.01□□□□□ -1.77
VAMP1P23763 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.01□□□□□ -1.77
VAMP1P23763 SCARNA11.3-201ENST00000517276 130 ntBASIC4.01□□□□□ -1.77
VAMP1P23763 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.01□□□□□ -1.77
VAMP1P23763 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.01□□□□□ -1.77
VAMP1P23763 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.01□□□□□ -1.77
VAMP1P23763 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.01□□□□□ -1.77
VAMP1P23763 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.01□□□□□ -1.77
VAMP1P23763 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.01□□□□□ -1.77
VAMP1P23763 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.01□□□□□ -1.77
VAMP1P23763 AL159153.1-201ENST00000619688 317 ntBASIC4.01□□□□□ -1.77
VAMP1P23763 AC090517.3-201ENST00000625170 141 ntBASIC4.01□□□□□ -1.77
VAMP1P23763 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.01□□□□□ -1.77
VAMP1P23763 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
VAMP1P23763 MIR7515-201ENST00000637837 67 ntBASIC4.01□□□□□ -1.77
VAMP1P23763 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.01□□□□□ -1.77
VAMP1P23763 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.01□□□□□ -1.77
VAMP1P23763 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
VAMP1P23763 OR13C1P-202ENST00000641378 2919 ntBASIC4.01□□□□□ -1.77
VAMP1P23763 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
VAMP1P23763 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.01□□□□□ -1.77
VAMP1P23763 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4□□□□□ -1.77
VAMP1P23763 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4□□□□□ -1.77
VAMP1P23763 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
VAMP1P23763 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4□□□□□ -1.77
VAMP1P23763 Y_RNA.126-201ENST00000363382 111 ntBASIC4□□□□□ -1.77
VAMP1P23763 RNU6-879P-201ENST00000364328 108 ntBASIC4□□□□□ -1.77
VAMP1P23763 MIR921-201ENST00000401133 56 ntBASIC4□□□□□ -1.77
VAMP1P23763 AL356057.3-201ENST00000402607 340 ntBASIC4□□□□□ -1.77
VAMP1P23763 Z74021.1-201ENST00000423610 407 ntBASIC4□□□□□ -1.77
VAMP1P23763 ARF4P2-201ENST00000430209 526 ntBASIC4□□□□□ -1.77
VAMP1P23763 GOT2P5-201ENST00000433995 546 ntBASIC4□□□□□ -1.77
VAMP1P23763 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4□□□□□ -1.77
VAMP1P23763 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4□□□□□ -1.77
VAMP1P23763 HMGN1P10-201ENST00000474557 553 ntBASIC4□□□□□ -1.77
VAMP1P23763 RPL23AP65-201ENST00000475608 468 ntBASIC4□□□□□ -1.77
VAMP1P23763 RN7SL547P-201ENST00000490793 290 ntBASIC4□□□□□ -1.77
VAMP1P23763 BTF3L4P4-201ENST00000506381 449 ntBASIC4□□□□□ -1.77
VAMP1P23763 RNA5SP154-201ENST00000516193 111 ntBASIC4□□□□□ -1.77
VAMP1P23763 RNA5SP392-201ENST00000516905 112 ntBASIC4□□□□□ -1.77
VAMP1P23763 RNU6-1137P-201ENST00000517073 99 ntBASIC4□□□□□ -1.77
VAMP1P23763 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4□□□□□ -1.77
VAMP1P23763 AC133555.2-201ENST00000550213 292 ntBASIC4□□□□□ -1.77
VAMP1P23763 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4□□□□□ -1.77
VAMP1P23763 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4□□□□□ -1.77
VAMP1P23763 AC027176.1-201ENST00000560204 514 ntBASIC4□□□□□ -1.77
VAMP1P23763 AL138895.2-201ENST00000603019 178 ntBASIC4□□□□□ -1.77
VAMP1P23763 AL390123.1-201ENST00000603216 237 ntBASIC4□□□□□ -1.77
VAMP1P23763 AC091979.2-201ENST00000607514 214 ntBASIC4□□□□□ -1.77
VAMP1P23763 5S_rRNA.16-201ENST00000612928 119 ntBASIC4□□□□□ -1.77
VAMP1P23763 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4□□□□□ -1.77
VAMP1P23763 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
VAMP1P23763 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VAMP1P23763 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4□□□□□ -1.77
VAMP1P23763 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VAMP1P23763 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4□□□□□ -1.77
VAMP1P23763 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VAMP1P23763 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
VAMP1P23763 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
VAMP1P23763 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
VAMP1P23763 AC021146.4-201ENST00000309229 279 ntBASIC3.99□□□□□ -1.77
VAMP1P23763 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
VAMP1P23763 RNU6-874P-201ENST00000362390 105 ntBASIC3.99□□□□□ -1.77
VAMP1P23763 RNU6-222P-201ENST00000362438 107 ntBASIC3.99□□□□□ -1.77
VAMP1P23763 RNU5F-3P-201ENST00000363767 117 ntBASIC3.99□□□□□ -1.77
VAMP1P23763 RN7SKP187-201ENST00000365536 330 ntBASIC3.99□□□□□ -1.77
VAMP1P23763 SNORA26.3-201ENST00000391119 136 ntBASIC3.99□□□□□ -1.77
VAMP1P23763 AL357515.1-201ENST00000402967 542 ntBASIC3.99□□□□□ -1.77
VAMP1P23763 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.99□□□□□ -1.77
VAMP1P23763 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.99□□□□□ -1.77
VAMP1P23763 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC3.99□□□□□ -1.77
VAMP1P23763 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VAMP1P23763 RNU7-170P-201ENST00000459303 61 ntBASIC3.99□□□□□ -1.77
VAMP1P23763 snoU13.14-201ENST00000459372 104 ntBASIC3.99□□□□□ -1.77
VAMP1P23763 AC073901.1-201ENST00000462471 408 ntBASIC3.99□□□□□ -1.77
VAMP1P23763 AC140059.1-201ENST00000489238 361 ntBASIC3.99□□□□□ -1.77
VAMP1P23763 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.99□□□□□ -1.77
VAMP1P23763 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.99□□□□□ -1.77
VAMP1P23763 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.99□□□□□ -1.77
VAMP1P23763 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VAMP1P23763 AC104695.3-201ENST00000604052 296 ntBASIC3.99□□□□□ -1.77
VAMP1P23763 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
VAMP1P23763 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.99□□□□□ -1.77
VAMP1P23763 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VAMP1P23763 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.99□□□□□ -1.77
VAMP1P23763 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.99□□□□□ -1.77
VAMP1P23763 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms