Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 HSPA8P4-201ENST00000511877 1920 ntBASIC2.74□□□□□ -1.97
CDH3P22223 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
CDH3P22223 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CDH3P22223 Y_RNA.372-201ENST00000365599 102 ntBASIC2.74□□□□□ -1.97
CDH3P22223 RNU6-550P-201ENST00000391057 101 ntBASIC2.74□□□□□ -1.97
CDH3P22223 MIR888-201ENST00000401186 77 ntBASIC2.74□□□□□ -1.97
CDH3P22223 AL513475.1-201ENST00000406602 315 ntBASIC2.74□□□□□ -1.97
CDH3P22223 Y_RNA.599-201ENST00000410489 109 ntBASIC2.74□□□□□ -1.97
CDH3P22223 EEF1A1P40-201ENST00000412883 573 ntBASIC2.74□□□□□ -1.97
CDH3P22223 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.74□□□□□ -1.97
CDH3P22223 SKA2P1-201ENST00000425592 390 ntBASIC2.74□□□□□ -1.97
CDH3P22223 TIMM9P3-201ENST00000428659 274 ntBASIC2.74□□□□□ -1.97
CDH3P22223 AL606489.2-201ENST00000433886 234 ntBASIC2.74□□□□□ -1.97
CDH3P22223 AL596276.1-201ENST00000434465 418 ntBASIC2.74□□□□□ -1.97
CDH3P22223 AC105272.1-201ENST00000438604 198 ntBASIC2.74□□□□□ -1.97
CDH3P22223 DPPA3P1-201ENST00000448050 469 ntBASIC2.74□□□□□ -1.97
CDH3P22223 CACYBPP2-201ENST00000453625 678 ntBASIC2.74□□□□□ -1.97
CDH3P22223 RNU7-63P-201ENST00000459054 62 ntBASIC2.74□□□□□ -1.97
CDH3P22223 RNU7-23P-201ENST00000459465 62 ntBASIC2.74□□□□□ -1.97
CDH3P22223 RPL31P41-201ENST00000477967 372 ntBASIC2.74□□□□□ -1.97
CDH3P22223 AC126182.1-201ENST00000478134 357 ntBASIC2.74□□□□□ -1.97
CDH3P22223 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.74□□□□□ -1.97
CDH3P22223 RPS15AP34-201ENST00000487776 387 ntBASIC2.74□□□□□ -1.97
CDH3P22223 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.74□□□□□ -1.97
CDH3P22223 SNORA40.12-201ENST00000516329 111 ntBASIC2.74□□□□□ -1.97
CDH3P22223 RNU6-314P-201ENST00000516574 104 ntBASIC2.74□□□□□ -1.97
CDH3P22223 SNORA31.15-201ENST00000516771 132 ntBASIC2.74□□□□□ -1.97
CDH3P22223 RN7SKP219-201ENST00000516825 296 ntBASIC2.74□□□□□ -1.97
CDH3P22223 RNU6-143P-201ENST00000516942 93 ntBASIC2.74□□□□□ -1.97
CDH3P22223 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.74□□□□□ -1.97
CDH3P22223 AC009902.1-201ENST00000519351 183 ntBASIC2.74□□□□□ -1.97
CDH3P22223 AC090136.1-201ENST00000520009 240 ntBASIC2.74□□□□□ -1.97
CDH3P22223 AP003033.1-201ENST00000527244 415 ntBASIC2.74□□□□□ -1.97
CDH3P22223 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.74□□□□□ -1.97
CDH3P22223 AC104383.1-201ENST00000530297 370 ntBASIC2.74□□□□□ -1.97
CDH3P22223 RANP3-201ENST00000530970 276 ntBASIC2.74□□□□□ -1.97
CDH3P22223 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.74□□□□□ -1.97
CDH3P22223 GTF3AP2-201ENST00000557014 266 ntBASIC2.74□□□□□ -1.97
CDH3P22223 NRBF2P5-201ENST00000603087 788 ntBASIC2.74□□□□□ -1.97
CDH3P22223 AC126118.1-201ENST00000607744 628 ntBASIC2.74□□□□□ -1.97
CDH3P22223 DUSP12P1-201ENST00000612874 516 ntBASIC2.74□□□□□ -1.97
CDH3P22223 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.74□□□□□ -1.97
CDH3P22223 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
CDH3P22223 CKAP2P1-201ENST00000555477 2049 ntBASIC2.73□□□□□ -1.97
CDH3P22223 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.73□□□□□ -1.97
CDH3P22223 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CDH3P22223 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CDH3P22223 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.73□□□□□ -1.97
CDH3P22223 AL139276.1-201ENST00000311910 1001 ntBASIC2.73□□□□□ -1.97
CDH3P22223 RNU6-778P-201ENST00000363269 103 ntBASIC2.73□□□□□ -1.97
CDH3P22223 RNU6-884P-201ENST00000363889 107 ntBASIC2.73□□□□□ -1.97
CDH3P22223 SNORA75B-201ENST00000384053 137 ntBASIC2.73□□□□□ -1.97
CDH3P22223 Y_RNA.554-201ENST00000384672 102 ntBASIC2.73□□□□□ -1.97
CDH3P22223 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CDH3P22223 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.73□□□□□ -1.97
CDH3P22223 OR6C66P-201ENST00000414917 930 ntBASIC2.73□□□□□ -1.97
CDH3P22223 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.73□□□□□ -1.97
CDH3P22223 AL358075.3-201ENST00000426289 226 ntBASIC2.73□□□□□ -1.97
CDH3P22223 AC009414.1-201ENST00000427200 443 ntBASIC2.73□□□□□ -1.97
CDH3P22223 SUMO1P4-201ENST00000429430 302 ntBASIC2.73□□□□□ -1.97
CDH3P22223 RPS15AP7-201ENST00000439294 405 ntBASIC2.73□□□□□ -1.97
CDH3P22223 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CDH3P22223 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.73□□□□□ -1.97
CDH3P22223 RPS29P20-201ENST00000489592 171 ntBASIC2.73□□□□□ -1.97
CDH3P22223 Y_RNA.693-201ENST00000516641 110 ntBASIC2.73□□□□□ -1.97
CDH3P22223 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.73□□□□□ -1.97
CDH3P22223 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.73□□□□□ -1.97
CDH3P22223 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.73□□□□□ -1.97
CDH3P22223 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.73□□□□□ -1.97
CDH3P22223 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.73□□□□□ -1.97
CDH3P22223 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.73□□□□□ -1.97
CDH3P22223 AL157871.3-201ENST00000557231 293 ntBASIC2.73□□□□□ -1.97
CDH3P22223 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.73□□□□□ -1.97
CDH3P22223 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CDH3P22223 MIR4446-201ENST00000578505 67 ntBASIC2.73□□□□□ -1.97
CDH3P22223 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
CDH3P22223 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.73□□□□□ -1.97
CDH3P22223 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.73□□□□□ -1.97
CDH3P22223 AL356575.1-201ENST00000603008 283 ntBASIC2.73□□□□□ -1.97
CDH3P22223 AC007938.3-201ENST00000604965 623 ntBASIC2.73□□□□□ -1.97
CDH3P22223 AL670379.4-201ENST00000605279 254 ntBASIC2.73□□□□□ -1.97
CDH3P22223 AL020991.1-201ENST00000612314 373 ntBASIC2.73□□□□□ -1.97
CDH3P22223 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CDH3P22223 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CDH3P22223 AC006020.1-201ENST00000420179 1854 ntBASIC2.73□□□□□ -1.97
CDH3P22223 RPL9P7-201ENST00000330965 580 ntBASIC2.72□□□□□ -1.97
CDH3P22223 RNU6-1287P-201ENST00000362914 107 ntBASIC2.72□□□□□ -1.97
CDH3P22223 RNU6-1085P-201ENST00000363576 107 ntBASIC2.72□□□□□ -1.97
CDH3P22223 SNORA25.6-201ENST00000364121 118 ntBASIC2.72□□□□□ -1.97
CDH3P22223 RNU6-996P-201ENST00000365438 107 ntBASIC2.72□□□□□ -1.97
CDH3P22223 RNU6-1060P-201ENST00000384664 107 ntBASIC2.72□□□□□ -1.97
CDH3P22223 MIR512-1-201ENST00000384913 84 ntBASIC2.72□□□□□ -1.97
CDH3P22223 MIR181A1-201ENST00000385026 110 ntBASIC2.72□□□□□ -1.97
CDH3P22223 MIR301A-201ENST00000385261 86 ntBASIC2.72□□□□□ -1.97
CDH3P22223 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CDH3P22223 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CDH3P22223 Y_RNA.619-201ENST00000410951 90 ntBASIC2.72□□□□□ -1.97
CDH3P22223 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.72□□□□□ -1.97
CDH3P22223 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.72□□□□□ -1.97
CDH3P22223 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms