Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 MIR2276-201ENST00000516886 89 ntBASIC3.67□□□□□ -1.82
COL11A2P13942 RNU6-1092P-201ENST00000516955 87 ntBASIC3.67□□□□□ -1.82
COL11A2P13942 AC022616.4-201ENST00000522985 181 ntBASIC3.67□□□□□ -1.82
COL11A2P13942 AL133271.1-201ENST00000538229 291 ntBASIC3.67□□□□□ -1.82
COL11A2P13942 AC026371.1-201ENST00000551867 419 ntBASIC3.67□□□□□ -1.82
COL11A2P13942 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.67□□□□□ -1.82
COL11A2P13942 AL669831.4-202ENST00000590817 238 ntBASIC3.67□□□□□ -1.82
COL11A2P13942 MIR6128-201ENST00000615528 109 ntBASIC3.67□□□□□ -1.82
COL11A2P13942 MIR6864-201ENST00000617935 70 ntBASIC3.67□□□□□ -1.82
COL11A2P13942 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
COL11A2P13942 KPNA2P1-201ENST00000458289 1591 ntBASIC3.66□□□□□ -1.82
COL11A2P13942 ASNSP1-201ENST00000518311 1939 ntBASIC3.66□□□□□ -1.82
COL11A2P13942 TPTE2P4-201ENST00000258589 1605 ntBASIC3.66□□□□□ -1.82
COL11A2P13942 XIAPP3-201ENST00000312918 795 ntBASIC3.66□□□□□ -1.82
COL11A2P13942 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
COL11A2P13942 Y_RNA.496-201ENST00000384444 101 ntBASIC3.66□□□□□ -1.82
COL11A2P13942 RPL21P24-201ENST00000413752 448 ntBASIC3.66□□□□□ -1.82
COL11A2P13942 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.66□□□□□ -1.82
COL11A2P13942 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.66□□□□□ -1.82
COL11A2P13942 HMGB1P12-201ENST00000438594 598 ntBASIC3.66□□□□□ -1.82
COL11A2P13942 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.66□□□□□ -1.82
COL11A2P13942 AC083906.5-201ENST00000503722 328 ntBASIC3.66□□□□□ -1.82
COL11A2P13942 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.66□□□□□ -1.82
COL11A2P13942 AC116655.1-201ENST00000508324 901 ntBASIC3.66□□□□□ -1.82
COL11A2P13942 SNORA14.1-201ENST00000516113 141 ntBASIC3.66□□□□□ -1.82
COL11A2P13942 RNU6-699P-201ENST00000517081 110 ntBASIC3.66□□□□□ -1.82
COL11A2P13942 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.66□□□□□ -1.82
COL11A2P13942 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.66□□□□□ -1.82
COL11A2P13942 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.66□□□□□ -1.82
COL11A2P13942 MIR5583-1-201ENST00000580941 59 ntBASIC3.66□□□□□ -1.82
COL11A2P13942 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.66□□□□□ -1.82
COL11A2P13942 NF1P5-201ENST00000588287 448 ntBASIC3.66□□□□□ -1.82
COL11A2P13942 AC174048.1-201ENST00000603389 144 ntBASIC3.66□□□□□ -1.82
COL11A2P13942 AC123786.2-201ENST00000603459 275 ntBASIC3.66□□□□□ -1.82
COL11A2P13942 U2.17-201ENST00000611454 95 ntBASIC3.66□□□□□ -1.82
COL11A2P13942 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.66□□□□□ -1.82
COL11A2P13942 AL669831.3-213ENST00000636676 183 ntBASIC3.66□□□□□ -1.82
COL11A2P13942 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.66□□□□□ -1.82
COL11A2P13942 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL11A2P13942 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL11A2P13942 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
COL11A2P13942 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
COL11A2P13942 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
COL11A2P13942 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
COL11A2P13942 Y_RNA.149-201ENST00000363558 117 ntBASIC3.65□□□□□ -1.82
COL11A2P13942 Y_RNA.152-201ENST00000363578 100 ntBASIC3.65□□□□□ -1.82
COL11A2P13942 RNU6-1222P-201ENST00000384615 107 ntBASIC3.65□□□□□ -1.82
COL11A2P13942 DPH3P2-201ENST00000422618 250 ntBASIC3.65□□□□□ -1.82
COL11A2P13942 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.65□□□□□ -1.82
COL11A2P13942 AC096644.2-201ENST00000429278 159 ntBASIC3.65□□□□□ -1.82
COL11A2P13942 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.65□□□□□ -1.82
COL11A2P13942 AC010655.3-201ENST00000478818 450 ntBASIC3.65□□□□□ -1.82
COL11A2P13942 RPL31P13-201ENST00000484151 370 ntBASIC3.65□□□□□ -1.82
COL11A2P13942 MRPS35P2-201ENST00000508242 191 ntBASIC3.65□□□□□ -1.82
COL11A2P13942 RN7SKP272-201ENST00000516988 232 ntBASIC3.65□□□□□ -1.82
COL11A2P13942 RNU6-64P-201ENST00000517119 105 ntBASIC3.65□□□□□ -1.82
COL11A2P13942 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
COL11A2P13942 CR383656.7-201ENST00000548164 174 ntBASIC3.65□□□□□ -1.82
COL11A2P13942 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.65□□□□□ -1.82
COL11A2P13942 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.65□□□□□ -1.82
COL11A2P13942 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.65□□□□□ -1.82
COL11A2P13942 AC008521.1-201ENST00000587471 187 ntBASIC3.65□□□□□ -1.82
COL11A2P13942 AC116447.1-201ENST00000613153 453 ntBASIC3.65□□□□□ -1.82
COL11A2P13942 AC004696.1-201ENST00000614345 607 ntBASIC3.65□□□□□ -1.82
COL11A2P13942 AL138726.1-201ENST00000614873 333 ntBASIC3.65□□□□□ -1.82
COL11A2P13942 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
COL11A2P13942 AC005592.1-201ENST00000566527 1640 ntBASIC3.65□□□□□ -1.83
COL11A2P13942 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL11A2P13942 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL11A2P13942 RNA5SP502-201ENST00000362694 119 ntBASIC3.64□□□□□ -1.83
COL11A2P13942 RNU6-238P-201ENST00000363313 106 ntBASIC3.64□□□□□ -1.83
COL11A2P13942 RNVU1-3-201ENST00000364313 161 ntBASIC3.64□□□□□ -1.83
COL11A2P13942 SMIM11P1-201ENST00000369586 178 ntBASIC3.64□□□□□ -1.83
COL11A2P13942 SNORA75B-201ENST00000384053 137 ntBASIC3.64□□□□□ -1.83
COL11A2P13942 MIR708-201ENST00000390708 88 ntBASIC3.64□□□□□ -1.83
COL11A2P13942 RNU6-550P-201ENST00000391057 101 ntBASIC3.64□□□□□ -1.83
COL11A2P13942 AL136372.1-201ENST00000403060 228 ntBASIC3.64□□□□□ -1.83
COL11A2P13942 RNU6-101P-201ENST00000410323 104 ntBASIC3.64□□□□□ -1.83
COL11A2P13942 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.64□□□□□ -1.83
COL11A2P13942 MTCO3P45-201ENST00000443036 613 ntBASIC3.64□□□□□ -1.83
COL11A2P13942 AL583843.1-201ENST00000456070 346 ntBASIC3.64□□□□□ -1.83
COL11A2P13942 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.64□□□□□ -1.83
COL11A2P13942 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.64□□□□□ -1.83
COL11A2P13942 AC090115.3-201ENST00000553218 849 ntBASIC3.64□□□□□ -1.83
COL11A2P13942 MIR5692C1-201ENST00000585309 91 ntBASIC3.64□□□□□ -1.83
COL11A2P13942 AC243829.7-201ENST00000633081 225 ntBASIC3.64□□□□□ -1.83
COL11A2P13942 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC3.64□□□□□ -1.83
COL11A2P13942 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.64□□□□□ -1.83
COL11A2P13942 ZNF826P-207ENST00000622273 1910 ntBASIC3.64□□□□□ -1.83
COL11A2P13942 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL11A2P13942 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL11A2P13942 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL11A2P13942 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
COL11A2P13942 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
COL11A2P13942 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.64□□□□□ -1.83
COL11A2P13942 AC093775.1-201ENST00000624154 1868 ntBASIC3.64□□□□□ -1.83
COL11A2P13942 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL11A2P13942 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.64□□□□□ -1.83
COL11A2P13942 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
COL11A2P13942 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms