Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 CYCSP40-201ENST00000575927 294 ntBASIC6.52□□□□□ -1.37
CHGAP10645 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC6.52□□□□□ -1.37
CHGAP10645 RNA5SP439-201ENST00000617595 124 ntBASIC6.52□□□□□ -1.37
CHGAP10645 AC018529.3-201ENST00000624212 2254 ntBASIC6.52□□□□□ -1.37
CHGAP10645 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC6.52□□□□□ -1.37
CHGAP10645 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC6.51□□□□□ -1.37
CHGAP10645 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CHGAP10645 MARK2P15-201ENST00000432204 2186 ntBASIC6.51□□□□□ -1.37
CHGAP10645 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHGAP10645 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
CHGAP10645 AC135776.4-201ENST00000624300 1904 ntBASIC6.51□□□□□ -1.37
CHGAP10645 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
CHGAP10645 MIR383-201ENST00000362257 73 ntBASIC6.51□□□□□ -1.37
CHGAP10645 MIR331-201ENST00000362302 94 ntBASIC6.51□□□□□ -1.37
CHGAP10645 RNU6-961P-201ENST00000363893 105 ntBASIC6.51□□□□□ -1.37
CHGAP10645 Y_RNA.331-201ENST00000365267 102 ntBASIC6.51□□□□□ -1.37
CHGAP10645 SDHCP2-201ENST00000398565 501 ntBASIC6.51□□□□□ -1.37
CHGAP10645 HLFP1-201ENST00000402375 499 ntBASIC6.51□□□□□ -1.37
CHGAP10645 BMS1P22-201ENST00000414726 313 ntBASIC6.51□□□□□ -1.37
CHGAP10645 UQCRBP2-201ENST00000447827 297 ntBASIC6.51□□□□□ -1.37
CHGAP10645 AL591623.2-201ENST00000449978 222 ntBASIC6.51□□□□□ -1.37
CHGAP10645 RPL23AP14-201ENST00000468281 468 ntBASIC6.51□□□□□ -1.37
CHGAP10645 RNU6-1219P-201ENST00000516143 112 ntBASIC6.51□□□□□ -1.37
CHGAP10645 RNU6-58P-201ENST00000517143 103 ntBASIC6.51□□□□□ -1.37
CHGAP10645 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC6.51□□□□□ -1.37
CHGAP10645 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC6.51□□□□□ -1.37
CHGAP10645 TRAV8-5-201ENST00000537369 341 ntBASIC6.51□□□□□ -1.37
CHGAP10645 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC6.51□□□□□ -1.37
CHGAP10645 AL365265.1-201ENST00000621045 234 ntBASIC6.51□□□□□ -1.37
CHGAP10645 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHGAP10645 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CHGAP10645 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC6.5□□□□□ -1.37
CHGAP10645 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.5□□□□□ -1.37
CHGAP10645 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CHGAP10645 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CHGAP10645 SPRR2C-201ENST00000290702 219 ntBASIC6.5□□□□□ -1.37
CHGAP10645 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CHGAP10645 SNORD115-8-201ENST00000363856 82 ntBASIC6.5□□□□□ -1.37
CHGAP10645 SNORD115-38-201ENST00000365037 82 ntBASIC6.5□□□□□ -1.37
CHGAP10645 Y_RNA.308-201ENST00000365043 101 ntBASIC6.5□□□□□ -1.37
CHGAP10645 RNU6-1027P-201ENST00000383998 107 ntBASIC6.5□□□□□ -1.37
CHGAP10645 IGKV1OR9-2-201ENST00000431378 277 ntBASIC6.5□□□□□ -1.37
CHGAP10645 SETP5-201ENST00000437270 562 ntBASIC6.5□□□□□ -1.37
CHGAP10645 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC6.5□□□□□ -1.37
CHGAP10645 MRPS10P1-201ENST00000448483 130 ntBASIC6.5□□□□□ -1.37
CHGAP10645 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC6.5□□□□□ -1.37
CHGAP10645 AC023424.1-201ENST00000496058 459 ntBASIC6.5□□□□□ -1.37
CHGAP10645 AC090281.1-201ENST00000523019 276 ntBASIC6.5□□□□□ -1.37
CHGAP10645 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC6.5□□□□□ -1.37
CHGAP10645 UBL5P4-201ENST00000562584 236 ntBASIC6.5□□□□□ -1.37
CHGAP10645 KLKP1-201ENST00000595979 403 ntBASIC6.5□□□□□ -1.37
CHGAP10645 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
CHGAP10645 SNORA43.4-201ENST00000629559 138 ntBASIC6.5□□□□□ -1.37
CHGAP10645 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
CHGAP10645 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC6.49□□□□□ -1.37
CHGAP10645 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.49□□□□□ -1.37
CHGAP10645 ADAM5-202ENST00000399789 1942 ntBASIC6.49□□□□□ -1.37
CHGAP10645 Y_RNA.262-201ENST00000364641 102 ntBASIC6.49□□□□□ -1.37
CHGAP10645 AC097462.2-201ENST00000504623 481 ntBASIC6.49□□□□□ -1.37
CHGAP10645 AC020593.1-201ENST00000507399 299 ntBASIC6.49□□□□□ -1.37
CHGAP10645 RNY3P16-201ENST00000516338 101 ntBASIC6.49□□□□□ -1.37
CHGAP10645 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC6.49□□□□□ -1.37
CHGAP10645 MIR5571-201ENST00000577998 113 ntBASIC6.49□□□□□ -1.37
CHGAP10645 MIR4308-201ENST00000580634 81 ntBASIC6.49□□□□□ -1.37
CHGAP10645 AC005176.2-201ENST00000596933 147 ntBASIC6.49□□□□□ -1.37
CHGAP10645 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CHGAP10645 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
CHGAP10645 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CHGAP10645 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC6.49□□□□□ -1.37
CHGAP10645 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CHGAP10645 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CHGAP10645 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CHGAP10645 MIR372-201ENST00000362225 67 ntBASIC6.48□□□□□ -1.37
CHGAP10645 RN7SKP280-201ENST00000364196 304 ntBASIC6.48□□□□□ -1.37
CHGAP10645 RNU6-898P-201ENST00000365627 104 ntBASIC6.48□□□□□ -1.37
CHGAP10645 RNU6-658P-201ENST00000384606 106 ntBASIC6.48□□□□□ -1.37
CHGAP10645 RNU6-628P-201ENST00000410675 107 ntBASIC6.48□□□□□ -1.37
CHGAP10645 AL358075.3-201ENST00000426289 226 ntBASIC6.48□□□□□ -1.37
CHGAP10645 AL049830.2-201ENST00000480072 201 ntBASIC6.48□□□□□ -1.37
CHGAP10645 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC6.48□□□□□ -1.37
CHGAP10645 RNU1-103P-201ENST00000516502 125 ntBASIC6.48□□□□□ -1.37
CHGAP10645 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC6.48□□□□□ -1.37
CHGAP10645 MIR4429-201ENST00000580105 73 ntBASIC6.48□□□□□ -1.37
CHGAP10645 AC113403.1-201ENST00000604910 193 ntBASIC6.48□□□□□ -1.37
CHGAP10645 MTND1P7-201ENST00000632801 297 ntBASIC6.48□□□□□ -1.37
CHGAP10645 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC6.48□□□□□ -1.37
CHGAP10645 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
CHGAP10645 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CHGAP10645 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CHGAP10645 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
CHGAP10645 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CHGAP10645 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC6.47□□□□□ -1.37
CHGAP10645 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CHGAP10645 Z73965.1-201ENST00000623412 2297 ntBASIC6.47□□□□□ -1.37
CHGAP10645 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CHGAP10645 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CHGAP10645 AC107068.1-201ENST00000563286 4218 ntBASIC6.47□□□□□ -1.37
CHGAP10645 SNORD116-20-201ENST00000384529 92 ntBASIC6.47□□□□□ -1.37
CHGAP10645 Y_RNA.597-201ENST00000410463 100 ntBASIC6.47□□□□□ -1.37
CHGAP10645 EIF4HP2-201ENST00000424380 563 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms