Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 MIR30A-201ENST00000385092 71 ntBASIC1.65□□□□□ -2.15
TPM1P09493 MIR634-201ENST00000385208 97 ntBASIC1.65□□□□□ -2.15
TPM1P09493 RNU4-26P-201ENST00000410270 107 ntBASIC1.65□□□□□ -2.15
TPM1P09493 RNA5SP501-201ENST00000410990 112 ntBASIC1.65□□□□□ -2.15
TPM1P09493 AL359704.1-201ENST00000411586 781 ntBASIC1.65□□□□□ -2.15
TPM1P09493 AL022400.1-201ENST00000423946 935 ntBASIC1.65□□□□□ -2.15
TPM1P09493 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.65□□□□□ -2.15
TPM1P09493 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.65□□□□□ -2.15
TPM1P09493 SSXP1-201ENST00000453640 473 ntBASIC1.65□□□□□ -2.15
TPM1P09493 AC021146.2-201ENST00000504736 556 ntBASIC1.65□□□□□ -2.15
TPM1P09493 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.65□□□□□ -2.15
TPM1P09493 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
TPM1P09493 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.65□□□□□ -2.15
TPM1P09493 SNORA25.15-201ENST00000516487 89 ntBASIC1.65□□□□□ -2.15
TPM1P09493 YWHAZP1-201ENST00000556286 722 ntBASIC1.65□□□□□ -2.15
TPM1P09493 MIR4255-201ENST00000579351 72 ntBASIC1.65□□□□□ -2.15
TPM1P09493 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.65□□□□□ -2.15
TPM1P09493 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.65□□□□□ -2.15
TPM1P09493 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.65□□□□□ -2.15
TPM1P09493 AC009318.2-201ENST00000610917 651 ntBASIC1.65□□□□□ -2.15
TPM1P09493 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.64□□□□□ -2.15
TPM1P09493 RNU1-62P-201ENST00000362599 164 ntBASIC1.64□□□□□ -2.15
TPM1P09493 SNORD114-1-201ENST00000362705 72 ntBASIC1.64□□□□□ -2.15
TPM1P09493 RNU4-51P-201ENST00000364206 140 ntBASIC1.64□□□□□ -2.15
TPM1P09493 MIR517C-201ENST00000385103 95 ntBASIC1.64□□□□□ -2.15
TPM1P09493 RNU6-817P-201ENST00000391083 104 ntBASIC1.64□□□□□ -2.15
TPM1P09493 FTH1P15-201ENST00000406984 280 ntBASIC1.64□□□□□ -2.15
TPM1P09493 MTCO3P46-201ENST00000425787 232 ntBASIC1.64□□□□□ -2.15
TPM1P09493 VN1R108P-201ENST00000431580 830 ntBASIC1.64□□□□□ -2.15
TPM1P09493 MTCO2P20-201ENST00000437339 673 ntBASIC1.64□□□□□ -2.15
TPM1P09493 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.64□□□□□ -2.15
TPM1P09493 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
TPM1P09493 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.64□□□□□ -2.15
TPM1P09493 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.64□□□□□ -2.15
TPM1P09493 PRELID3BP1-201ENST00000457142 540 ntBASIC1.64□□□□□ -2.15
TPM1P09493 RPS29P21-201ENST00000496272 170 ntBASIC1.64□□□□□ -2.15
TPM1P09493 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
TPM1P09493 RNU2-53P-201ENST00000516257 147 ntBASIC1.64□□□□□ -2.15
TPM1P09493 SNORA31.19-201ENST00000517079 126 ntBASIC1.64□□□□□ -2.15
TPM1P09493 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.64□□□□□ -2.15
TPM1P09493 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.64□□□□□ -2.15
TPM1P09493 AL136520.1-202ENST00000555494 763 ntBASIC1.64□□□□□ -2.15
TPM1P09493 VN1R83P-201ENST00000595685 445 ntBASIC1.64□□□□□ -2.15
TPM1P09493 CLIC4P2-201ENST00000601934 717 ntBASIC1.64□□□□□ -2.15
TPM1P09493 AC006270.3-201ENST00000605967 1036 ntBASIC1.64□□□□□ -2.15
TPM1P09493 AC091304.6-201ENST00000619761 202 ntBASIC1.64□□□□□ -2.15
TPM1P09493 AC091965.5-201ENST00000624785 342 ntBASIC1.64□□□□□ -2.15
TPM1P09493 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
TPM1P09493 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.64□□□□□ -2.15
TPM1P09493 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
TPM1P09493 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
TPM1P09493 MIR424-201ENST00000362227 98 ntBASIC1.63□□□□□ -2.15
TPM1P09493 RNU6-621P-201ENST00000364752 109 ntBASIC1.63□□□□□ -2.15
TPM1P09493 MIR597-201ENST00000384968 97 ntBASIC1.63□□□□□ -2.15
TPM1P09493 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
TPM1P09493 AL627390.1-201ENST00000396055 340 ntBASIC1.63□□□□□ -2.15
TPM1P09493 RN7SKP284-201ENST00000411002 343 ntBASIC1.63□□□□□ -2.15
TPM1P09493 RNU2-32P-201ENST00000411193 191 ntBASIC1.63□□□□□ -2.15
TPM1P09493 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.63□□□□□ -2.15
TPM1P09493 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.63□□□□□ -2.15
TPM1P09493 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.63□□□□□ -2.15
TPM1P09493 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.63□□□□□ -2.15
TPM1P09493 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.63□□□□□ -2.15
TPM1P09493 AL078601.1-201ENST00000444542 271 ntBASIC1.63□□□□□ -2.15
TPM1P09493 HSPE1P24-201ENST00000450782 238 ntBASIC1.63□□□□□ -2.15
TPM1P09493 AMD1P1-201ENST00000457220 922 ntBASIC1.63□□□□□ -2.15
TPM1P09493 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.63□□□□□ -2.15
TPM1P09493 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.63□□□□□ -2.15
TPM1P09493 FAM92A1P2-202ENST00000504766 877 ntBASIC1.63□□□□□ -2.15
TPM1P09493 MTND4P2-201ENST00000507767 1203 ntBASIC1.63□□□□□ -2.15
TPM1P09493 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.63□□□□□ -2.15
TPM1P09493 AC109329.1-201ENST00000518744 317 ntBASIC1.63□□□□□ -2.15
TPM1P09493 AP005660.1-201ENST00000522972 293 ntBASIC1.63□□□□□ -2.15
TPM1P09493 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.63□□□□□ -2.15
TPM1P09493 ARL2BPP2-201ENST00000550907 489 ntBASIC1.63□□□□□ -2.15
TPM1P09493 RPS3AP4-201ENST00000555161 764 ntBASIC1.63□□□□□ -2.15
TPM1P09493 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.63□□□□□ -2.15
TPM1P09493 BNIP3P26-201ENST00000600827 554 ntBASIC1.63□□□□□ -2.15
TPM1P09493 AL358072.1-201ENST00000604156 575 ntBASIC1.63□□□□□ -2.15
TPM1P09493 AC124016.2-201ENST00000610058 665 ntBASIC1.63□□□□□ -2.15
TPM1P09493 AC091834.1-201ENST00000614543 472 ntBASIC1.63□□□□□ -2.15
TPM1P09493 AC018926.1-201ENST00000616335 435 ntBASIC1.63□□□□□ -2.15
TPM1P09493 AL512427.1-201ENST00000618593 349 ntBASIC1.63□□□□□ -2.15
TPM1P09493 AL136313.1-201ENST00000624804 202 ntBASIC1.63□□□□□ -2.15
TPM1P09493 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
TPM1P09493 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.63□□□□□ -2.15
TPM1P09493 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.63□□□□□ -2.15
TPM1P09493 RNU6-1010P-201ENST00000362757 107 ntBASIC1.62□□□□□ -2.15
TPM1P09493 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
TPM1P09493 AC138623.1-201ENST00000418060 216 ntBASIC1.62□□□□□ -2.15
TPM1P09493 USP9YP11-201ENST00000427537 717 ntBASIC1.62□□□□□ -2.15
TPM1P09493 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.62□□□□□ -2.15
TPM1P09493 MTCO1P27-201ENST00000448269 226 ntBASIC1.62□□□□□ -2.15
TPM1P09493 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.62□□□□□ -2.15
TPM1P09493 ZNF886P-201ENST00000450781 723 ntBASIC1.62□□□□□ -2.15
TPM1P09493 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
TPM1P09493 PTP4A1P4-201ENST00000512479 322 ntBASIC1.62□□□□□ -2.15
TPM1P09493 AP003392.2-201ENST00000527269 208 ntBASIC1.62□□□□□ -2.15
TPM1P09493 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.62□□□□□ -2.15
TPM1P09493 AK6P1-201ENST00000540219 478 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms