Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 SNORA48.5-201ENST00000391143 135 ntBASIC2.59□□□□□ -1.99
VIMP08670 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.59□□□□□ -1.99
VIMP08670 CIR1P3-201ENST00000405137 479 ntBASIC2.59□□□□□ -1.99
VIMP08670 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.59□□□□□ -1.99
VIMP08670 USP9YP27-201ENST00000418455 438 ntBASIC2.59□□□□□ -1.99
VIMP08670 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.59□□□□□ -1.99
VIMP08670 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
VIMP08670 AL627311.1-201ENST00000431514 115 ntBASIC2.59□□□□□ -1.99
VIMP08670 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.59□□□□□ -1.99
VIMP08670 RPS15AP9-201ENST00000439856 381 ntBASIC2.59□□□□□ -1.99
VIMP08670 AC104389.3-201ENST00000445629 235 ntBASIC2.59□□□□□ -1.99
VIMP08670 AL360271.2-201ENST00000447710 161 ntBASIC2.59□□□□□ -1.99
VIMP08670 AC104058.1-201ENST00000448028 297 ntBASIC2.59□□□□□ -1.99
VIMP08670 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.59□□□□□ -1.99
VIMP08670 AL162395.1-201ENST00000457882 422 ntBASIC2.59□□□□□ -1.99
VIMP08670 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.59□□□□□ -1.99
VIMP08670 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.59□□□□□ -1.99
VIMP08670 AC023141.11-201ENST00000508864 202 ntBASIC2.59□□□□□ -1.99
VIMP08670 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
VIMP08670 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.59□□□□□ -1.99
VIMP08670 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.59□□□□□ -1.99
VIMP08670 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.59□□□□□ -1.99
VIMP08670 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.59□□□□□ -1.99
VIMP08670 AP005136.1-201ENST00000579765 429 ntBASIC2.59□□□□□ -1.99
VIMP08670 MIR3616-201ENST00000584070 92 ntBASIC2.59□□□□□ -1.99
VIMP08670 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.59□□□□□ -1.99
VIMP08670 RN7SKP299-201ENST00000606679 301 ntBASIC2.59□□□□□ -1.99
VIMP08670 AC005332.10-201ENST00000612725 619 ntBASIC2.59□□□□□ -1.99
VIMP08670 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.59□□□□□ -2
VIMP08670 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.59□□□□□ -2
VIMP08670 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.59□□□□□ -2
VIMP08670 MTND5P30-201ENST00000452896 1731 ntBASIC2.59□□□□□ -2
VIMP08670 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.59□□□□□ -2
VIMP08670 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.59□□□□□ -2
VIMP08670 AL109809.4-201ENST00000603520 2185 ntBASIC2.59□□□□□ -2
VIMP08670 AL359854.1-201ENST00000614203 1594 ntBASIC2.58□□□□□ -2
VIMP08670 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.58□□□□□ -2
VIMP08670 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
VIMP08670 SNORD14B-201ENST00000364533 90 ntBASIC2.58□□□□□ -2
VIMP08670 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
VIMP08670 MIR10A-201ENST00000385043 110 ntBASIC2.58□□□□□ -2
VIMP08670 MIR670-201ENST00000390142 98 ntBASIC2.58□□□□□ -2
VIMP08670 RNU6-220P-201ENST00000390919 107 ntBASIC2.58□□□□□ -2
VIMP08670 FTH1P15-201ENST00000406984 280 ntBASIC2.58□□□□□ -2
VIMP08670 AF274854.1-201ENST00000413236 615 ntBASIC2.58□□□□□ -2
VIMP08670 OR6C66P-201ENST00000414917 930 ntBASIC2.58□□□□□ -2
VIMP08670 RPL21P90-201ENST00000415692 466 ntBASIC2.58□□□□□ -2
VIMP08670 USP9YP20-201ENST00000419224 558 ntBASIC2.58□□□□□ -2
VIMP08670 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.58□□□□□ -2
VIMP08670 MICF-203ENST00000432679 129 ntBASIC2.58□□□□□ -2
VIMP08670 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.58□□□□□ -2
VIMP08670 AC000111.3-201ENST00000433478 193 ntBASIC2.58□□□□□ -2
VIMP08670 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.58□□□□□ -2
VIMP08670 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.58□□□□□ -2
VIMP08670 AC011816.1-201ENST00000441346 546 ntBASIC2.58□□□□□ -2
VIMP08670 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.58□□□□□ -2
VIMP08670 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.58□□□□□ -2
VIMP08670 snoU109.2-201ENST00000459316 135 ntBASIC2.58□□□□□ -2
VIMP08670 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.58□□□□□ -2
VIMP08670 RPL7P49-201ENST00000471402 708 ntBASIC2.58□□□□□ -2
VIMP08670 AC011005.2-201ENST00000487324 359 ntBASIC2.58□□□□□ -2
VIMP08670 RN7SL504P-201ENST00000494496 287 ntBASIC2.58□□□□□ -2
VIMP08670 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.58□□□□□ -2
VIMP08670 MTCO2P4-201ENST00000517968 247 ntBASIC2.58□□□□□ -2
VIMP08670 AC135279.1-201ENST00000543493 504 ntBASIC2.58□□□□□ -2
VIMP08670 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.58□□□□□ -2
VIMP08670 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.58□□□□□ -2
VIMP08670 AL391840.1-201ENST00000571144 367 ntBASIC2.58□□□□□ -2
VIMP08670 MIR4775-201ENST00000581168 75 ntBASIC2.58□□□□□ -2
VIMP08670 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.58□□□□□ -2
VIMP08670 AC068790.2-201ENST00000602601 557 ntBASIC2.58□□□□□ -2
VIMP08670 AL138889.2-201ENST00000603883 242 ntBASIC2.58□□□□□ -2
VIMP08670 AL021997.1-201ENST00000605757 193 ntBASIC2.58□□□□□ -2
VIMP08670 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.58□□□□□ -2
VIMP08670 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.58□□□□□ -2
VIMP08670 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
VIMP08670 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
VIMP08670 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.58□□□□□ -2
VIMP08670 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
VIMP08670 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
VIMP08670 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.58□□□□□ -2
VIMP08670 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.57□□□□□ -2
VIMP08670 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.57□□□□□ -2
VIMP08670 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
VIMP08670 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
VIMP08670 RNU6-1287P-201ENST00000362914 107 ntBASIC2.57□□□□□ -2
VIMP08670 RNU6-1060P-201ENST00000384664 107 ntBASIC2.57□□□□□ -2
VIMP08670 RNVU1-14-201ENST00000384770 164 ntBASIC2.57□□□□□ -2
VIMP08670 AL133475.1-201ENST00000404414 305 ntBASIC2.57□□□□□ -2
VIMP08670 AL162578.1-201ENST00000406202 378 ntBASIC2.57□□□□□ -2
VIMP08670 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.57□□□□□ -2
VIMP08670 MTCO2P11-201ENST00000431069 680 ntBASIC2.57□□□□□ -2
VIMP08670 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.57□□□□□ -2
VIMP08670 AC132479.1-201ENST00000449160 144 ntBASIC2.57□□□□□ -2
VIMP08670 NDUFB1P2-201ENST00000449477 176 ntBASIC2.57□□□□□ -2
VIMP08670 AL441985.1-201ENST00000457727 251 ntBASIC2.57□□□□□ -2
VIMP08670 RPS29P15-201ENST00000458329 171 ntBASIC2.57□□□□□ -2
VIMP08670 RNU7-182P-201ENST00000459009 62 ntBASIC2.57□□□□□ -2
VIMP08670 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.57□□□□□ -2
VIMP08670 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms