Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.35□□□□□ -2.19
HLA-DQB2P05538 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
HLA-DQB2P05538 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.35□□□□□ -2.19
HLA-DQB2P05538 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.35□□□□□ -2.19
HLA-DQB2P05538 AC068338.1-201ENST00000565567 176 ntBASIC1.35□□□□□ -2.19
HLA-DQB2P05538 AC022254.1-201ENST00000567857 235 ntBASIC1.35□□□□□ -2.19
HLA-DQB2P05538 MIR4769-201ENST00000584126 77 ntBASIC1.35□□□□□ -2.19
HLA-DQB2P05538 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.35□□□□□ -2.19
HLA-DQB2P05538 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.35□□□□□ -2.19
HLA-DQB2P05538 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.35□□□□□ -2.19
HLA-DQB2P05538 RPL21P136-201ENST00000605378 396 ntBASIC1.35□□□□□ -2.19
HLA-DQB2P05538 NDUFA8P1-201ENST00000605525 367 ntBASIC1.35□□□□□ -2.19
HLA-DQB2P05538 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.35□□□□□ -2.19
HLA-DQB2P05538 AP000776.1-201ENST00000530032 1663 ntBASIC1.35□□□□□ -2.19
HLA-DQB2P05538 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
HLA-DQB2P05538 Y_RNA.140-201ENST00000363474 103 ntBASIC1.34□□□□□ -2.19
HLA-DQB2P05538 RNU4-51P-201ENST00000364206 140 ntBASIC1.34□□□□□ -2.19
HLA-DQB2P05538 MIR758-201ENST00000390227 88 ntBASIC1.34□□□□□ -2.19
HLA-DQB2P05538 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.34□□□□□ -2.19
HLA-DQB2P05538 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.34□□□□□ -2.19
HLA-DQB2P05538 USP9YP24-201ENST00000434374 697 ntBASIC1.34□□□□□ -2.19
HLA-DQB2P05538 SNRPEP7-201ENST00000438350 220 ntBASIC1.34□□□□□ -2.19
HLA-DQB2P05538 MTND2P29-201ENST00000438595 412 ntBASIC1.34□□□□□ -2.19
HLA-DQB2P05538 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.34□□□□□ -2.19
HLA-DQB2P05538 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.34□□□□□ -2.19
HLA-DQB2P05538 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC1.34□□□□□ -2.19
HLA-DQB2P05538 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.34□□□□□ -2.19
HLA-DQB2P05538 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.34□□□□□ -2.19
HLA-DQB2P05538 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.34□□□□□ -2.19
HLA-DQB2P05538 RPF2P2-201ENST00000504693 896 ntBASIC1.34□□□□□ -2.19
HLA-DQB2P05538 AC008837.2-201ENST00000513076 418 ntBASIC1.34□□□□□ -2.19
HLA-DQB2P05538 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.34□□□□□ -2.19
HLA-DQB2P05538 OR5B19P-201ENST00000531766 928 ntBASIC1.34□□□□□ -2.19
HLA-DQB2P05538 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.34□□□□□ -2.19
HLA-DQB2P05538 RPS3AP4-201ENST00000555161 764 ntBASIC1.34□□□□□ -2.19
HLA-DQB2P05538 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.34□□□□□ -2.19
HLA-DQB2P05538 MIR4421-201ENST00000578133 69 ntBASIC1.34□□□□□ -2.19
HLA-DQB2P05538 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.34□□□□□ -2.19
HLA-DQB2P05538 VN1R80P-201ENST00000597126 338 ntBASIC1.34□□□□□ -2.19
HLA-DQB2P05538 MTATP6P2-201ENST00000603319 678 ntBASIC1.34□□□□□ -2.19
HLA-DQB2P05538 AC024060.1-201ENST00000607052 494 ntBASIC1.34□□□□□ -2.19
HLA-DQB2P05538 AC034229.4-201ENST00000607861 441 ntBASIC1.34□□□□□ -2.19
HLA-DQB2P05538 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.34□□□□□ -2.19
HLA-DQB2P05538 PCMTD1P7-201ENST00000634506 357 ntBASIC1.34□□□□□ -2.19
HLA-DQB2P05538 U6.99-201ENST00000637524 83 ntBASIC1.34□□□□□ -2.19
HLA-DQB2P05538 LINC02211-204ENST00000642024 1070 ntBASIC1.34□□□□□ -2.19
HLA-DQB2P05538 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.34□□□□□ -2.2
HLA-DQB2P05538 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
HLA-DQB2P05538 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.33□□□□□ -2.2
HLA-DQB2P05538 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
HLA-DQB2P05538 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.33□□□□□ -2.2
HLA-DQB2P05538 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.33□□□□□ -2.2
HLA-DQB2P05538 MTND5P33-201ENST00000571250 1450 ntBASIC1.33□□□□□ -2.2
HLA-DQB2P05538 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
HLA-DQB2P05538 RNU1-62P-201ENST00000362599 164 ntBASIC1.33□□□□□ -2.2
HLA-DQB2P05538 RNU6-853P-201ENST00000364306 107 ntBASIC1.33□□□□□ -2.2
HLA-DQB2P05538 RNU6-621P-201ENST00000364752 109 ntBASIC1.33□□□□□ -2.2
HLA-DQB2P05538 RNU6-224P-201ENST00000384055 107 ntBASIC1.33□□□□□ -2.2
HLA-DQB2P05538 AC068050.1-201ENST00000394891 380 ntBASIC1.33□□□□□ -2.2
HLA-DQB2P05538 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.33□□□□□ -2.2
HLA-DQB2P05538 BTF3P4-201ENST00000418852 495 ntBASIC1.33□□□□□ -2.2
HLA-DQB2P05538 MTCO2P25-201ENST00000447065 681 ntBASIC1.33□□□□□ -2.2
HLA-DQB2P05538 AP000542.1-201ENST00000448473 371 ntBASIC1.33□□□□□ -2.2
HLA-DQB2P05538 KATNBL1P6-201ENST00000453433 915 ntBASIC1.33□□□□□ -2.2
HLA-DQB2P05538 MTCYBP35-201ENST00000503630 1137 ntBASIC1.33□□□□□ -2.2
HLA-DQB2P05538 AC113347.3-201ENST00000509113 148 ntBASIC1.33□□□□□ -2.2
HLA-DQB2P05538 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
HLA-DQB2P05538 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.33□□□□□ -2.2
HLA-DQB2P05538 PSMA3P-201ENST00000555485 635 ntBASIC1.33□□□□□ -2.2
HLA-DQB2P05538 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.33□□□□□ -2.2
HLA-DQB2P05538 AL354943.1-201ENST00000572103 781 ntBASIC1.33□□□□□ -2.2
HLA-DQB2P05538 AC026271.5-201ENST00000577873 130 ntBASIC1.33□□□□□ -2.2
HLA-DQB2P05538 MIR4293-201ENST00000584305 78 ntBASIC1.33□□□□□ -2.2
HLA-DQB2P05538 VN1R83P-201ENST00000595685 445 ntBASIC1.33□□□□□ -2.2
HLA-DQB2P05538 AP000942.3-201ENST00000603702 160 ntBASIC1.33□□□□□ -2.2
HLA-DQB2P05538 AC103810.8-201ENST00000607347 118 ntBASIC1.33□□□□□ -2.2
HLA-DQB2P05538 RNU6-91P-201ENST00000607774 107 ntBASIC1.33□□□□□ -2.2
HLA-DQB2P05538 AL512427.1-201ENST00000618593 349 ntBASIC1.33□□□□□ -2.2
HLA-DQB2P05538 AC099654.9-201ENST00000637055 678 ntBASIC1.33□□□□□ -2.2
HLA-DQB2P05538 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.33□□□□□ -2.2
HLA-DQB2P05538 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.33□□□□□ -2.2
HLA-DQB2P05538 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
HLA-DQB2P05538 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
HLA-DQB2P05538 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
HLA-DQB2P05538 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
HLA-DQB2P05538 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
HLA-DQB2P05538 MIR126-201ENST00000362291 85 ntBASIC1.32□□□□□ -2.2
HLA-DQB2P05538 RNU6-1280P-201ENST00000365211 107 ntBASIC1.32□□□□□ -2.2
HLA-DQB2P05538 MIR518D-201ENST00000385014 87 ntBASIC1.32□□□□□ -2.2
HLA-DQB2P05538 MIR1283-2-201ENST00000408621 87 ntBASIC1.32□□□□□ -2.2
HLA-DQB2P05538 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC1.32□□□□□ -2.2
HLA-DQB2P05538 AP1B1P2-201ENST00000416196 106 ntBASIC1.32□□□□□ -2.2
HLA-DQB2P05538 AL449283.1-202ENST00000418249 604 ntBASIC1.32□□□□□ -2.2
HLA-DQB2P05538 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.32□□□□□ -2.2
HLA-DQB2P05538 USP9YP11-201ENST00000427537 717 ntBASIC1.32□□□□□ -2.2
HLA-DQB2P05538 EEF1E1P1-201ENST00000446998 430 ntBASIC1.32□□□□□ -2.2
HLA-DQB2P05538 AL137159.1-201ENST00000452808 512 ntBASIC1.32□□□□□ -2.2
HLA-DQB2P05538 RNU7-59P-201ENST00000459101 61 ntBASIC1.32□□□□□ -2.2
HLA-DQB2P05538 AC087884.1-201ENST00000469738 328 ntBASIC1.32□□□□□ -2.2
HLA-DQB2P05538 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms