Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.9□□□□□ -1.95
GPC4O75487 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.9□□□□□ -1.95
GPC4O75487 RNA5SP401-201ENST00000515920 127 ntBASIC2.9□□□□□ -1.95
GPC4O75487 RNA5SP341-201ENST00000516261 117 ntBASIC2.9□□□□□ -1.95
GPC4O75487 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.9□□□□□ -1.95
GPC4O75487 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.9□□□□□ -1.95
GPC4O75487 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.9□□□□□ -1.95
GPC4O75487 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.9□□□□□ -1.95
GPC4O75487 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.9□□□□□ -1.95
GPC4O75487 MIR4782-201ENST00000577987 79 ntBASIC2.9□□□□□ -1.95
GPC4O75487 AC008739.2-201ENST00000597006 317 ntBASIC2.9□□□□□ -1.95
GPC4O75487 AC080078.2-201ENST00000603766 501 ntBASIC2.9□□□□□ -1.95
GPC4O75487 AL645944.1-201ENST00000603857 493 ntBASIC2.9□□□□□ -1.95
GPC4O75487 AC091953.5-201ENST00000622919 233 ntBASIC2.9□□□□□ -1.95
GPC4O75487 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.9□□□□□ -1.95
GPC4O75487 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.9□□□□□ -1.95
GPC4O75487 AC068137.3-201ENST00000639191 341 ntBASIC2.9□□□□□ -1.95
GPC4O75487 AC073869.6-201ENST00000640656 341 ntBASIC2.9□□□□□ -1.95
GPC4O75487 AC093536.2-201ENST00000565257 1406 ntBASIC2.9□□□□□ -1.95
GPC4O75487 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
GPC4O75487 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.9□□□□□ -1.95
GPC4O75487 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.9□□□□□ -1.95
GPC4O75487 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.89□□□□□ -1.95
GPC4O75487 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.89□□□□□ -1.95
GPC4O75487 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
GPC4O75487 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
GPC4O75487 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
GPC4O75487 RNU6-898P-201ENST00000365627 104 ntBASIC2.89□□□□□ -1.95
GPC4O75487 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
GPC4O75487 MIR518D-201ENST00000385014 87 ntBASIC2.89□□□□□ -1.95
GPC4O75487 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
GPC4O75487 Y_RNA.623-201ENST00000411128 95 ntBASIC2.89□□□□□ -1.95
GPC4O75487 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.89□□□□□ -1.95
GPC4O75487 RPL7P37-201ENST00000425095 738 ntBASIC2.89□□□□□ -1.95
GPC4O75487 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.89□□□□□ -1.95
GPC4O75487 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.89□□□□□ -1.95
GPC4O75487 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.89□□□□□ -1.95
GPC4O75487 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.89□□□□□ -1.95
GPC4O75487 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.89□□□□□ -1.95
GPC4O75487 SCARNA18-201ENST00000459004 134 ntBASIC2.89□□□□□ -1.95
GPC4O75487 RNU7-180P-201ENST00000459240 63 ntBASIC2.89□□□□□ -1.95
GPC4O75487 RNU6-261P-201ENST00000459506 102 ntBASIC2.89□□□□□ -1.95
GPC4O75487 RPS29P12-201ENST00000460178 152 ntBASIC2.89□□□□□ -1.95
GPC4O75487 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.89□□□□□ -1.95
GPC4O75487 RPS29P2-201ENST00000479278 136 ntBASIC2.89□□□□□ -1.95
GPC4O75487 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.89□□□□□ -1.95
GPC4O75487 RNU6-581P-201ENST00000516214 105 ntBASIC2.89□□□□□ -1.95
GPC4O75487 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.89□□□□□ -1.95
GPC4O75487 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.89□□□□□ -1.95
GPC4O75487 NACAP3-201ENST00000552100 481 ntBASIC2.89□□□□□ -1.95
GPC4O75487 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.89□□□□□ -1.95
GPC4O75487 AC027807.1-201ENST00000559921 996 ntBASIC2.89□□□□□ -1.95
GPC4O75487 AC025281.1-201ENST00000567026 265 ntBASIC2.89□□□□□ -1.95
GPC4O75487 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.89□□□□□ -1.95
GPC4O75487 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.89□□□□□ -1.95
GPC4O75487 RPL23AP88-201ENST00000605759 454 ntBASIC2.89□□□□□ -1.95
GPC4O75487 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
GPC4O75487 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
GPC4O75487 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
GPC4O75487 MIR412-201ENST00000362142 91 ntBASIC2.88□□□□□ -1.95
GPC4O75487 RNU6-1303P-201ENST00000364841 107 ntBASIC2.88□□□□□ -1.95
GPC4O75487 Y_RNA.481-201ENST00000384373 102 ntBASIC2.88□□□□□ -1.95
GPC4O75487 RNU6-45P-201ENST00000384471 107 ntBASIC2.88□□□□□ -1.95
GPC4O75487 MIR181A1-201ENST00000385026 110 ntBASIC2.88□□□□□ -1.95
GPC4O75487 MIR767-201ENST00000390228 109 ntBASIC2.88□□□□□ -1.95
GPC4O75487 SNORA16.2-201ENST00000390991 127 ntBASIC2.88□□□□□ -1.95
GPC4O75487 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.88□□□□□ -1.95
GPC4O75487 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.88□□□□□ -1.95
GPC4O75487 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.88□□□□□ -1.95
GPC4O75487 SNRPFP3-201ENST00000457792 225 ntBASIC2.88□□□□□ -1.95
GPC4O75487 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.88□□□□□ -1.95
GPC4O75487 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.88□□□□□ -1.95
GPC4O75487 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.88□□□□□ -1.95
GPC4O75487 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.88□□□□□ -1.95
GPC4O75487 AC008716.1-201ENST00000511084 513 ntBASIC2.88□□□□□ -1.95
GPC4O75487 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.88□□□□□ -1.95
GPC4O75487 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.88□□□□□ -1.95
GPC4O75487 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.88□□□□□ -1.95
GPC4O75487 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.88□□□□□ -1.95
GPC4O75487 LINC00933-203ENST00000559812 219 ntBASIC2.88□□□□□ -1.95
GPC4O75487 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.88□□□□□ -1.95
GPC4O75487 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.88□□□□□ -1.95
GPC4O75487 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.88□□□□□ -1.95
GPC4O75487 AC000403.1-201ENST00000613696 3585 ntBASIC2.87□□□□□ -1.95
GPC4O75487 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.87□□□□□ -1.95
GPC4O75487 AC008669.1-201ENST00000565823 2178 ntBASIC2.87□□□□□ -1.95
GPC4O75487 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
GPC4O75487 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
GPC4O75487 RNU1-35P-201ENST00000362782 153 ntBASIC2.87□□□□□ -1.95
GPC4O75487 RNU1-105P-201ENST00000363470 161 ntBASIC2.87□□□□□ -1.95
GPC4O75487 SNORD14B-201ENST00000364533 90 ntBASIC2.87□□□□□ -1.95
GPC4O75487 RNU6-851P-201ENST00000384565 107 ntBASIC2.87□□□□□ -1.95
GPC4O75487 SNORD70.1-201ENST00000391007 85 ntBASIC2.87□□□□□ -1.95
GPC4O75487 SNORA48.5-201ENST00000391143 135 ntBASIC2.87□□□□□ -1.95
GPC4O75487 RNA5SP354-201ENST00000391247 136 ntBASIC2.87□□□□□ -1.95
GPC4O75487 RNU2-3P-201ENST00000410144 191 ntBASIC2.87□□□□□ -1.95
GPC4O75487 RNU6-648P-201ENST00000410190 107 ntBASIC2.87□□□□□ -1.95
GPC4O75487 Y_RNA.619-201ENST00000410951 90 ntBASIC2.87□□□□□ -1.95
GPC4O75487 CYCSP33-201ENST00000414485 327 ntBASIC2.87□□□□□ -1.95
GPC4O75487 AC016831.2-201ENST00000417179 352 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms