Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.11□□□□□ -1.91
LDB2O43679 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
LDB2O43679 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.11□□□□□ -1.91
LDB2O43679 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.11□□□□□ -1.91
LDB2O43679 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LDB2O43679 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
LDB2O43679 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
LDB2O43679 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.1□□□□□ -1.91
LDB2O43679 RNU6-371P-201ENST00000364283 108 ntBASIC3.1□□□□□ -1.91
LDB2O43679 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
LDB2O43679 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.1□□□□□ -1.91
LDB2O43679 RNU6-1013P-201ENST00000384180 107 ntBASIC3.1□□□□□ -1.91
LDB2O43679 Y_RNA.509-201ENST00000384506 99 ntBASIC3.1□□□□□ -1.91
LDB2O43679 SNORD15B-201ENST00000384714 146 ntBASIC3.1□□□□□ -1.91
LDB2O43679 MIR301A-201ENST00000385261 86 ntBASIC3.1□□□□□ -1.91
LDB2O43679 RPLP0P7-201ENST00000416050 667 ntBASIC3.1□□□□□ -1.91
LDB2O43679 AC007919.1-201ENST00000429380 217 ntBASIC3.1□□□□□ -1.91
LDB2O43679 HMGB1P18-201ENST00000438801 619 ntBASIC3.1□□□□□ -1.91
LDB2O43679 SSXP4-201ENST00000451349 245 ntBASIC3.1□□□□□ -1.91
LDB2O43679 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.1□□□□□ -1.91
LDB2O43679 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.1□□□□□ -1.91
LDB2O43679 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.1□□□□□ -1.91
LDB2O43679 RNU6-1315P-201ENST00000517187 99 ntBASIC3.1□□□□□ -1.91
LDB2O43679 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.1□□□□□ -1.91
LDB2O43679 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.1□□□□□ -1.91
LDB2O43679 AL163153.1-201ENST00000554223 283 ntBASIC3.1□□□□□ -1.91
LDB2O43679 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.1□□□□□ -1.91
LDB2O43679 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LDB2O43679 MIR5004-201ENST00000579078 107 ntBASIC3.1□□□□□ -1.91
LDB2O43679 MIR5692A1-201ENST00000580523 69 ntBASIC3.1□□□□□ -1.91
LDB2O43679 MIR3941-201ENST00000582572 103 ntBASIC3.1□□□□□ -1.91
LDB2O43679 MIR548AC-201ENST00000585049 88 ntBASIC3.1□□□□□ -1.91
LDB2O43679 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.1□□□□□ -1.91
LDB2O43679 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.1□□□□□ -1.91
LDB2O43679 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.1□□□□□ -1.91
LDB2O43679 AL162274.2-201ENST00000614406 332 ntBASIC3.1□□□□□ -1.91
LDB2O43679 RMST_7.1-201ENST00000621935 268 ntBASIC3.1□□□□□ -1.91
LDB2O43679 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
LDB2O43679 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.1□□□□□ -1.91
LDB2O43679 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.1□□□□□ -1.91
LDB2O43679 AL353743.1-202ENST00000431724 1695 ntBASIC3.1□□□□□ -1.91
LDB2O43679 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LDB2O43679 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
LDB2O43679 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LDB2O43679 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.09□□□□□ -1.91
LDB2O43679 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LDB2O43679 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
LDB2O43679 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.09□□□□□ -1.91
LDB2O43679 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.09□□□□□ -1.91
LDB2O43679 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
LDB2O43679 Y_RNA.184-201ENST00000363884 108 ntBASIC3.09□□□□□ -1.91
LDB2O43679 Y_RNA.245-201ENST00000364493 95 ntBASIC3.09□□□□□ -1.91
LDB2O43679 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.09□□□□□ -1.91
LDB2O43679 SNORA4.3-201ENST00000365564 137 ntBASIC3.09□□□□□ -1.91
LDB2O43679 RNU6-45P-201ENST00000384471 107 ntBASIC3.09□□□□□ -1.91
LDB2O43679 SNORA46-201ENST00000384762 135 ntBASIC3.09□□□□□ -1.91
LDB2O43679 MIR493-201ENST00000385254 89 ntBASIC3.09□□□□□ -1.91
LDB2O43679 SNORD67-201ENST00000390833 111 ntBASIC3.09□□□□□ -1.91
LDB2O43679 AC096664.2-201ENST00000411843 406 ntBASIC3.09□□□□□ -1.91
LDB2O43679 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.09□□□□□ -1.91
LDB2O43679 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.09□□□□□ -1.91
LDB2O43679 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.09□□□□□ -1.91
LDB2O43679 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.09□□□□□ -1.91
LDB2O43679 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.09□□□□□ -1.91
LDB2O43679 FABP5P15-201ENST00000453566 214 ntBASIC3.09□□□□□ -1.91
LDB2O43679 RPS27P29-201ENST00000463110 252 ntBASIC3.09□□□□□ -1.91
LDB2O43679 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.09□□□□□ -1.91
LDB2O43679 RN7SL20P-201ENST00000488827 297 ntBASIC3.09□□□□□ -1.91
LDB2O43679 AC009901.1-201ENST00000506703 541 ntBASIC3.09□□□□□ -1.91
LDB2O43679 SNORA19.2-201ENST00000516013 114 ntBASIC3.09□□□□□ -1.91
LDB2O43679 Y_RNA.691-201ENST00000516611 103 ntBASIC3.09□□□□□ -1.91
LDB2O43679 RNA5SP290-201ENST00000517133 127 ntBASIC3.09□□□□□ -1.91
LDB2O43679 AC245166.1-201ENST00000521012 253 ntBASIC3.09□□□□□ -1.91
LDB2O43679 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.09□□□□□ -1.91
LDB2O43679 AP000889.2-201ENST00000532684 490 ntBASIC3.09□□□□□ -1.91
LDB2O43679 TRAV28-201ENST00000557548 323 ntBASIC3.09□□□□□ -1.91
LDB2O43679 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.09□□□□□ -1.91
LDB2O43679 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.09□□□□□ -1.91
LDB2O43679 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.09□□□□□ -1.91
LDB2O43679 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.09□□□□□ -1.91
LDB2O43679 MIR1273C-201ENST00000578669 77 ntBASIC3.09□□□□□ -1.91
LDB2O43679 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.09□□□□□ -1.91
LDB2O43679 ATP1B3P1-201ENST00000605365 821 ntBASIC3.09□□□□□ -1.91
LDB2O43679 AC099778.2-201ENST00000610904 211 ntBASIC3.09□□□□□ -1.91
LDB2O43679 DUSP12P1-201ENST00000612874 516 ntBASIC3.09□□□□□ -1.91
LDB2O43679 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.09□□□□□ -1.91
LDB2O43679 AC099506.2-201ENST00000623074 221 ntBASIC3.09□□□□□ -1.91
LDB2O43679 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.09□□□□□ -1.91
LDB2O43679 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LDB2O43679 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.09□□□□□ -1.91
LDB2O43679 AC007785.2-201ENST00000598627 1916 ntBASIC3.09□□□□□ -1.92
LDB2O43679 AC005183.1-201ENST00000603687 1979 ntBASIC3.09□□□□□ -1.92
LDB2O43679 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
LDB2O43679 AC073325.2-201ENST00000339545 159 ntBASIC3.08□□□□□ -1.92
LDB2O43679 Y_RNA.535-201ENST00000384612 99 ntBASIC3.08□□□□□ -1.92
LDB2O43679 RPL21P90-201ENST00000415692 466 ntBASIC3.08□□□□□ -1.92
LDB2O43679 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.08□□□□□ -1.92
LDB2O43679 GPM6BP2-201ENST00000432046 144 ntBASIC3.08□□□□□ -1.92
LDB2O43679 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.08□□□□□ -1.92
LDB2O43679 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms