Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
MSH5O43196 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
MSH5O43196 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
MSH5O43196 RNU6-600P-201ENST00000362524 99 ntBASIC8.03□□□□□ -1.12
MSH5O43196 MIR1203-201ENST00000408812 85 ntBASIC8.03□□□□□ -1.12
MSH5O43196 SDHDP6-201ENST00000414693 480 ntBASIC8.03□□□□□ -1.12
MSH5O43196 AL035660.1-201ENST00000422041 222 ntBASIC8.03□□□□□ -1.12
MSH5O43196 AL445584.1-201ENST00000431451 330 ntBASIC8.03□□□□□ -1.12
MSH5O43196 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC8.03□□□□□ -1.12
MSH5O43196 RN7SL193P-201ENST00000491708 276 ntBASIC8.03□□□□□ -1.12
MSH5O43196 IGHVII-40-1-201ENST00000517316 58 ntBASIC8.03□□□□□ -1.12
MSH5O43196 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC8.03□□□□□ -1.12
MSH5O43196 LCOR-201ENST00000286067 4542 ntBASIC8.03□□□□□ -1.12
MSH5O43196 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
MSH5O43196 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
MSH5O43196 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
MSH5O43196 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
MSH5O43196 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
MSH5O43196 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC8.02□□□□□ -1.13
MSH5O43196 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC8.02□□□□□ -1.13
MSH5O43196 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
MSH5O43196 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC8.02□□□□□ -1.13
MSH5O43196 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC8.02□□□□□ -1.13
MSH5O43196 RNU6-1313P-201ENST00000362622 102 ntBASIC8.02□□□□□ -1.13
MSH5O43196 Y_RNA.410-201ENST00000383992 113 ntBASIC8.02□□□□□ -1.13
MSH5O43196 MIR143-201ENST00000385300 106 ntBASIC8.02□□□□□ -1.13
MSH5O43196 RNU6-587P-201ENST00000391282 106 ntBASIC8.02□□□□□ -1.13
MSH5O43196 RNA5SP390-201ENST00000410191 113 ntBASIC8.02□□□□□ -1.13
MSH5O43196 AL590399.4-201ENST00000436561 601 ntBASIC8.02□□□□□ -1.13
MSH5O43196 AC010285.1-201ENST00000470580 392 ntBASIC8.02□□□□□ -1.13
MSH5O43196 RN7SL326P-201ENST00000477493 296 ntBASIC8.02□□□□□ -1.13
MSH5O43196 AL035690.1-201ENST00000490892 383 ntBASIC8.02□□□□□ -1.13
MSH5O43196 RNU1-103P-201ENST00000516502 125 ntBASIC8.02□□□□□ -1.13
MSH5O43196 MIR4700-201ENST00000578311 74 ntBASIC8.02□□□□□ -1.13
MSH5O43196 MIR4484-201ENST00000582855 83 ntBASIC8.02□□□□□ -1.13
MSH5O43196 AC136601.2-201ENST00000604356 474 ntBASIC8.02□□□□□ -1.13
MSH5O43196 AC011944.2-201ENST00000624440 683 ntBASIC8.02□□□□□ -1.13
MSH5O43196 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC8.02□□□□□ -1.13
MSH5O43196 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC8.02□□□□□ -1.13
MSH5O43196 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
MSH5O43196 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
MSH5O43196 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
MSH5O43196 AC104964.3-201ENST00000606115 2860 ntBASIC8.02□□□□□ -1.13
MSH5O43196 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
MSH5O43196 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
MSH5O43196 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
MSH5O43196 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
MSH5O43196 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
MSH5O43196 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
MSH5O43196 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
MSH5O43196 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC8.01□□□□□ -1.13
MSH5O43196 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC8.01□□□□□ -1.13
MSH5O43196 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
MSH5O43196 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
MSH5O43196 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
MSH5O43196 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC8.01□□□□□ -1.13
MSH5O43196 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC8.01□□□□□ -1.13
MSH5O43196 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC8.01□□□□□ -1.13
MSH5O43196 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
MSH5O43196 RNU6-686P-201ENST00000364839 107 ntBASIC8.01□□□□□ -1.13
MSH5O43196 RNU6-117P-201ENST00000365415 107 ntBASIC8.01□□□□□ -1.13
MSH5O43196 RNA5SP156-201ENST00000410250 110 ntBASIC8.01□□□□□ -1.13
MSH5O43196 AL512326.2-201ENST00000426359 151 ntBASIC8.01□□□□□ -1.13
MSH5O43196 RPS23P1-201ENST00000491662 432 ntBASIC8.01□□□□□ -1.13
MSH5O43196 PPBPP1-201ENST00000510807 373 ntBASIC8.01□□□□□ -1.13
MSH5O43196 RNA5SP230-201ENST00000517039 122 ntBASIC8.01□□□□□ -1.13
MSH5O43196 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
MSH5O43196 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC8.01□□□□□ -1.13
MSH5O43196 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC8.01□□□□□ -1.13
MSH5O43196 MIR6134-201ENST00000617606 109 ntBASIC8.01□□□□□ -1.13
MSH5O43196 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC8.01□□□□□ -1.13
MSH5O43196 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
MSH5O43196 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC8.01□□□□□ -1.13
MSH5O43196 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
MSH5O43196 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
MSH5O43196 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC8□□□□□ -1.13
MSH5O43196 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
MSH5O43196 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC8□□□□□ -1.13
MSH5O43196 RNU1-19P-201ENST00000363306 165 ntBASIC8□□□□□ -1.13
MSH5O43196 RNU6-1163P-201ENST00000364516 107 ntBASIC8□□□□□ -1.13
MSH5O43196 Z92545.1-201ENST00000411782 234 ntBASIC8□□□□□ -1.13
MSH5O43196 AL591419.1-201ENST00000427423 339 ntBASIC8□□□□□ -1.13
MSH5O43196 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC8□□□□□ -1.13
MSH5O43196 AC011604.1-201ENST00000545978 196 ntBASIC8□□□□□ -1.13
MSH5O43196 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC8□□□□□ -1.13
MSH5O43196 AC044860.2-201ENST00000561005 179 ntBASIC8□□□□□ -1.13
MSH5O43196 AL390726.5-202ENST00000564800 256 ntBASIC8□□□□□ -1.13
MSH5O43196 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC8□□□□□ -1.13
MSH5O43196 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC8□□□□□ -1.13
MSH5O43196 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
MSH5O43196 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
MSH5O43196 AC133552.1-201ENST00000569988 4007 ntBASIC8□□□□□ -1.13
MSH5O43196 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC8□□□□□ -1.13
MSH5O43196 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
MSH5O43196 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC7.99□□□□□ -1.13
MSH5O43196 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
MSH5O43196 AC026241.1-201ENST00000517873 2142 ntBASIC7.99□□□□□ -1.13
MSH5O43196 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
MSH5O43196 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
MSH5O43196 DEFB108F-201ENST00000344638 222 ntBASIC7.99□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms