Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.03□□□□□ -2.24
HMGB3O15347 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.03□□□□□ -2.24
HMGB3O15347 AC093012.1-202ENST00000549403 582 ntBASIC1.03□□□□□ -2.24
HMGB3O15347 AC093249.1-201ENST00000567049 203 ntBASIC1.03□□□□□ -2.24
HMGB3O15347 AC005668.1-201ENST00000571142 476 ntBASIC1.03□□□□□ -2.24
HMGB3O15347 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.03□□□□□ -2.24
HMGB3O15347 WISP1-OT1-201ENST00000602893 642 ntBASIC1.03□□□□□ -2.24
HMGB3O15347 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.03□□□□□ -2.24
HMGB3O15347 ZNF72P-201ENST00000425869 1908 ntBASIC1.03□□□□□ -2.25
HMGB3O15347 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
HMGB3O15347 SNORD114-19-201ENST00000363072 75 ntBASIC1.02□□□□□ -2.25
HMGB3O15347 RNU6-271P-201ENST00000363858 105 ntBASIC1.02□□□□□ -2.25
HMGB3O15347 RNU6-60P-201ENST00000364792 103 ntBASIC1.02□□□□□ -2.25
HMGB3O15347 RNU6-174P-201ENST00000410406 106 ntBASIC1.02□□□□□ -2.25
HMGB3O15347 RNU2-42P-201ENST00000410697 113 ntBASIC1.02□□□□□ -2.25
HMGB3O15347 RPL21P24-201ENST00000413752 448 ntBASIC1.02□□□□□ -2.25
HMGB3O15347 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.02□□□□□ -2.25
HMGB3O15347 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.02□□□□□ -2.25
HMGB3O15347 MTCO1P3-201ENST00000429327 192 ntBASIC1.02□□□□□ -2.25
HMGB3O15347 MTCO1P44-201ENST00000441935 243 ntBASIC1.02□□□□□ -2.25
HMGB3O15347 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.02□□□□□ -2.25
HMGB3O15347 TEX21P-201ENST00000447107 1476 ntBASIC1.02□□□□□ -2.25
HMGB3O15347 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.02□□□□□ -2.25
HMGB3O15347 RPL18AP17-201ENST00000455326 198 ntBASIC1.02□□□□□ -2.25
HMGB3O15347 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.02□□□□□ -2.25
HMGB3O15347 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.02□□□□□ -2.25
HMGB3O15347 OR2A41P-201ENST00000473586 105 ntBASIC1.02□□□□□ -2.25
HMGB3O15347 MTND4P2-201ENST00000507767 1203 ntBASIC1.02□□□□□ -2.25
HMGB3O15347 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.02□□□□□ -2.25
HMGB3O15347 RNA5SP445-201ENST00000515889 115 ntBASIC1.02□□□□□ -2.25
HMGB3O15347 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
HMGB3O15347 AP003033.1-201ENST00000527244 415 ntBASIC1.02□□□□□ -2.25
HMGB3O15347 AP003392.2-201ENST00000527269 208 ntBASIC1.02□□□□□ -2.25
HMGB3O15347 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.02□□□□□ -2.25
HMGB3O15347 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.02□□□□□ -2.25
HMGB3O15347 AL079343.1-201ENST00000572358 1771 ntBASIC1.02□□□□□ -2.25
HMGB3O15347 MIR4782-201ENST00000577987 79 ntBASIC1.02□□□□□ -2.25
HMGB3O15347 AL645939.4-201ENST00000604495 135 ntBASIC1.02□□□□□ -2.25
HMGB3O15347 AL583856.2-201ENST00000606298 543 ntBASIC1.02□□□□□ -2.25
HMGB3O15347 AC092447.10-201ENST00000620607 1652 ntBASIC1.02□□□□□ -2.25
HMGB3O15347 AP000560.1-201ENST00000624150 1937 ntBASIC1.02□□□□□ -2.25
HMGB3O15347 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
HMGB3O15347 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
HMGB3O15347 SNORD114-1-201ENST00000362705 72 ntBASIC1.01□□□□□ -2.25
HMGB3O15347 RNU6-898P-201ENST00000365627 104 ntBASIC1.01□□□□□ -2.25
HMGB3O15347 RNU6-546P-201ENST00000383991 107 ntBASIC1.01□□□□□ -2.25
HMGB3O15347 AC092648.1-201ENST00000425870 423 ntBASIC1.01□□□□□ -2.25
HMGB3O15347 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.01□□□□□ -2.25
HMGB3O15347 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.01□□□□□ -2.25
HMGB3O15347 MTND5P14-201ENST00000441481 1267 ntBASIC1.01□□□□□ -2.25
HMGB3O15347 MTND1P31-201ENST00000449206 961 ntBASIC1.01□□□□□ -2.25
HMGB3O15347 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.01□□□□□ -2.25
HMGB3O15347 MTND2P30-201ENST00000456663 382 ntBASIC1.01□□□□□ -2.25
HMGB3O15347 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.01□□□□□ -2.25
HMGB3O15347 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.01□□□□□ -2.25
HMGB3O15347 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.01□□□□□ -2.25
HMGB3O15347 UBL5P3-201ENST00000475112 231 ntBASIC1.01□□□□□ -2.25
HMGB3O15347 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.01□□□□□ -2.25
HMGB3O15347 AC069306.1-201ENST00000507006 843 ntBASIC1.01□□□□□ -2.25
HMGB3O15347 AC025465.3-201ENST00000510570 311 ntBASIC1.01□□□□□ -2.25
HMGB3O15347 AC117532.1-201ENST00000514638 323 ntBASIC1.01□□□□□ -2.25
HMGB3O15347 RNVU1-2-201ENST00000516326 135 ntBASIC1.01□□□□□ -2.25
HMGB3O15347 AC109329.1-201ENST00000518744 317 ntBASIC1.01□□□□□ -2.25
HMGB3O15347 RRN3P3-201ENST00000549207 578 ntBASIC1.01□□□□□ -2.25
HMGB3O15347 AC023813.2-201ENST00000564321 469 ntBASIC1.01□□□□□ -2.25
HMGB3O15347 AC011494.1-201ENST00000596454 237 ntBASIC1.01□□□□□ -2.25
HMGB3O15347 AL133445.2-201ENST00000611191 527 ntBASIC1.01□□□□□ -2.25
HMGB3O15347 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.01□□□□□ -2.25
HMGB3O15347 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.01□□□□□ -2.25
HMGB3O15347 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.01□□□□□ -2.25
HMGB3O15347 AC092125.1-201ENST00000562568 1995 ntBASIC1□□□□□ -2.25
HMGB3O15347 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1□□□□□ -2.25
HMGB3O15347 RNU5B-1-201ENST00000363286 116 ntBASIC1□□□□□ -2.25
HMGB3O15347 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
HMGB3O15347 RNU6-1122P-201ENST00000384449 107 ntBASIC1□□□□□ -2.25
HMGB3O15347 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1□□□□□ -2.25
HMGB3O15347 AL591704.2-201ENST00000421658 181 ntBASIC1□□□□□ -2.25
HMGB3O15347 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1□□□□□ -2.25
HMGB3O15347 AC104651.1-201ENST00000427559 735 ntBASIC1□□□□□ -2.25
HMGB3O15347 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1□□□□□ -2.25
HMGB3O15347 USP9YP35-201ENST00000435696 412 ntBASIC1□□□□□ -2.25
HMGB3O15347 HMGB1P31-201ENST00000437242 427 ntBASIC1□□□□□ -2.25
HMGB3O15347 MTCYBP18-201ENST00000501056 747 ntBASIC1□□□□□ -2.25
HMGB3O15347 MTCYBP16-201ENST00000509187 1129 ntBASIC1□□□□□ -2.25
HMGB3O15347 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1□□□□□ -2.25
HMGB3O15347 RNU2-53P-201ENST00000516257 147 ntBASIC1□□□□□ -2.25
HMGB3O15347 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1□□□□□ -2.25
HMGB3O15347 AC022616.8-201ENST00000533569 253 ntBASIC1□□□□□ -2.25
HMGB3O15347 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1□□□□□ -2.25
HMGB3O15347 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1□□□□□ -2.25
HMGB3O15347 LINC00557-201ENST00000563184 1279 ntBASIC1□□□□□ -2.25
HMGB3O15347 AC097468.3-201ENST00000607956 456 ntBASIC1□□□□□ -2.25
HMGB3O15347 AC090517.3-201ENST00000625170 141 ntBASIC1□□□□□ -2.25
HMGB3O15347 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1□□□□□ -2.25
HMGB3O15347 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1□□□□□ -2.25
HMGB3O15347 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1□□□□□ -2.25
HMGB3O15347 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC0.99□□□□□ -2.25
HMGB3O15347 RNU6-1010P-201ENST00000362757 107 ntBASIC0.99□□□□□ -2.25
HMGB3O15347 SNORA22-201ENST00000383907 134 ntBASIC0.99□□□□□ -2.25
HMGB3O15347 SNORA22C-201ENST00000384614 134 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms