Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.39□□□□□ -2.03
CDX4O14627 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.39□□□□□ -2.03
CDX4O14627 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
CDX4O14627 AC009163.5-201ENST00000575421 637 ntBASIC2.39□□□□□ -2.03
CDX4O14627 AC103810.6-201ENST00000606708 136 ntBASIC2.39□□□□□ -2.03
CDX4O14627 AC004852.3-201ENST00000614131 326 ntBASIC2.39□□□□□ -2.03
CDX4O14627 AC090517.2-201ENST00000614966 680 ntBASIC2.39□□□□□ -2.03
CDX4O14627 AC034102.8-201ENST00000615146 484 ntBASIC2.39□□□□□ -2.03
CDX4O14627 U4.5-201ENST00000617137 123 ntBASIC2.39□□□□□ -2.03
CDX4O14627 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.39□□□□□ -2.03
CDX4O14627 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CDX4O14627 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.38□□□□□ -2.03
CDX4O14627 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.38□□□□□ -2.03
CDX4O14627 Y_RNA.248-201ENST00000364501 109 ntBASIC2.38□□□□□ -2.03
CDX4O14627 RNU4-12P-201ENST00000365233 139 ntBASIC2.38□□□□□ -2.03
CDX4O14627 SNORA20.2-201ENST00000383922 131 ntBASIC2.38□□□□□ -2.03
CDX4O14627 MIR181A1-201ENST00000385026 110 ntBASIC2.38□□□□□ -2.03
CDX4O14627 RNU6-817P-201ENST00000391083 104 ntBASIC2.38□□□□□ -2.03
CDX4O14627 RPL21P3-201ENST00000395517 478 ntBASIC2.38□□□□□ -2.03
CDX4O14627 AL590002.1-201ENST00000406554 418 ntBASIC2.38□□□□□ -2.03
CDX4O14627 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.38□□□□□ -2.03
CDX4O14627 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.38□□□□□ -2.03
CDX4O14627 BTF3L4P3-201ENST00000418879 476 ntBASIC2.38□□□□□ -2.03
CDX4O14627 AC133104.1-201ENST00000429100 218 ntBASIC2.38□□□□□ -2.03
CDX4O14627 AC104332.2-201ENST00000429959 156 ntBASIC2.38□□□□□ -2.03
CDX4O14627 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.38□□□□□ -2.03
CDX4O14627 MTND3P21-201ENST00000433774 331 ntBASIC2.38□□□□□ -2.03
CDX4O14627 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.38□□□□□ -2.03
CDX4O14627 AC132479.1-201ENST00000449160 144 ntBASIC2.38□□□□□ -2.03
CDX4O14627 AC003071.1-201ENST00000451219 789 ntBASIC2.38□□□□□ -2.03
CDX4O14627 AC146507.2-201ENST00000460608 476 ntBASIC2.38□□□□□ -2.03
CDX4O14627 AL135752.1-201ENST00000479477 471 ntBASIC2.38□□□□□ -2.03
CDX4O14627 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.38□□□□□ -2.03
CDX4O14627 AP004217.1-201ENST00000480579 346 ntBASIC2.38□□□□□ -2.03
CDX4O14627 HMGB1P29-201ENST00000505659 499 ntBASIC2.38□□□□□ -2.03
CDX4O14627 AC009646.1-201ENST00000510455 318 ntBASIC2.38□□□□□ -2.03
CDX4O14627 RNU6-1092P-201ENST00000516955 87 ntBASIC2.38□□□□□ -2.03
CDX4O14627 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.38□□□□□ -2.03
CDX4O14627 AC022616.3-201ENST00000523940 148 ntBASIC2.38□□□□□ -2.03
CDX4O14627 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.38□□□□□ -2.03
CDX4O14627 AL133241.1-201ENST00000556832 487 ntBASIC2.38□□□□□ -2.03
CDX4O14627 ZNF519P2-201ENST00000557032 169 ntBASIC2.38□□□□□ -2.03
CDX4O14627 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.38□□□□□ -2.03
CDX4O14627 AC093536.2-201ENST00000565257 1406 ntBASIC2.38□□□□□ -2.03
CDX4O14627 AL136363.1-201ENST00000605349 337 ntBASIC2.38□□□□□ -2.03
CDX4O14627 AC103710.2-201ENST00000609912 942 ntBASIC2.38□□□□□ -2.03
CDX4O14627 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
CDX4O14627 AL161629.2-201ENST00000615347 275 ntBASIC2.38□□□□□ -2.03
CDX4O14627 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.38□□□□□ -2.03
CDX4O14627 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.38□□□□□ -2.03
CDX4O14627 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CDX4O14627 Z82195.2-201ENST00000612348 18351 ntBASIC2.38□□□□□ -2.03
CDX4O14627 AC073343.1-201ENST00000328239 651 ntBASIC2.37□□□□□ -2.03
CDX4O14627 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.37□□□□□ -2.03
CDX4O14627 Y_RNA.1-201ENST00000352915 104 ntBASIC2.37□□□□□ -2.03
CDX4O14627 RNU6-1167P-201ENST00000363227 94 ntBASIC2.37□□□□□ -2.03
CDX4O14627 RNU1-91P-201ENST00000364746 163 ntBASIC2.37□□□□□ -2.03
CDX4O14627 RNU6-169P-201ENST00000365336 107 ntBASIC2.37□□□□□ -2.03
CDX4O14627 RNU5E-6P-201ENST00000365574 115 ntBASIC2.37□□□□□ -2.03
CDX4O14627 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
CDX4O14627 RNU6-701P-201ENST00000384059 107 ntBASIC2.37□□□□□ -2.03
CDX4O14627 RNU6-217P-201ENST00000384164 104 ntBASIC2.37□□□□□ -2.03
CDX4O14627 RNU6-198P-201ENST00000384258 104 ntBASIC2.37□□□□□ -2.03
CDX4O14627 RNU6-140P-201ENST00000384566 108 ntBASIC2.37□□□□□ -2.03
CDX4O14627 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.37□□□□□ -2.03
CDX4O14627 AC080125.1-201ENST00000414888 684 ntBASIC2.37□□□□□ -2.03
CDX4O14627 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.37□□□□□ -2.03
CDX4O14627 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.37□□□□□ -2.03
CDX4O14627 HMGN2P30-201ENST00000423237 256 ntBASIC2.37□□□□□ -2.03
CDX4O14627 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.37□□□□□ -2.03
CDX4O14627 USP9YP18-201ENST00000425912 695 ntBASIC2.37□□□□□ -2.03
CDX4O14627 AC093151.1-201ENST00000427711 313 ntBASIC2.37□□□□□ -2.03
CDX4O14627 AC073464.1-201ENST00000429823 534 ntBASIC2.37□□□□□ -2.03
CDX4O14627 AC002486.1-201ENST00000435098 391 ntBASIC2.37□□□□□ -2.03
CDX4O14627 MTCO2P3-201ENST00000442543 421 ntBASIC2.37□□□□□ -2.03
CDX4O14627 NEFMP1-201ENST00000443423 1006 ntBASIC2.37□□□□□ -2.03
CDX4O14627 AC104389.3-201ENST00000445629 235 ntBASIC2.37□□□□□ -2.03
CDX4O14627 CACYBPP2-201ENST00000453625 678 ntBASIC2.37□□□□□ -2.03
CDX4O14627 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.37□□□□□ -2.03
CDX4O14627 AC092989.1-201ENST00000481235 277 ntBASIC2.37□□□□□ -2.03
CDX4O14627 AC007182.2-201ENST00000489251 402 ntBASIC2.37□□□□□ -2.03
CDX4O14627 RPL23AP49-201ENST00000492925 468 ntBASIC2.37□□□□□ -2.03
CDX4O14627 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.37□□□□□ -2.03
CDX4O14627 AC008716.1-201ENST00000511084 513 ntBASIC2.37□□□□□ -2.03
CDX4O14627 AC010493.1-201ENST00000513479 292 ntBASIC2.37□□□□□ -2.03
CDX4O14627 SNORA31.3-201ENST00000516029 96 ntBASIC2.37□□□□□ -2.03
CDX4O14627 RNU6-928P-201ENST00000516876 104 ntBASIC2.37□□□□□ -2.03
CDX4O14627 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.37□□□□□ -2.03
CDX4O14627 AC134698.4-201ENST00000523451 826 ntBASIC2.37□□□□□ -2.03
CDX4O14627 AK6P1-201ENST00000540219 478 ntBASIC2.37□□□□□ -2.03
CDX4O14627 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.37□□□□□ -2.03
CDX4O14627 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.37□□□□□ -2.03
CDX4O14627 ARL2BPP2-201ENST00000550907 489 ntBASIC2.37□□□□□ -2.03
CDX4O14627 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.37□□□□□ -2.03
CDX4O14627 AC174048.1-201ENST00000603389 144 ntBASIC2.37□□□□□ -2.03
CDX4O14627 DPPA3P3-201ENST00000603842 430 ntBASIC2.37□□□□□ -2.03
CDX4O14627 AL391646.1-201ENST00000603860 190 ntBASIC2.37□□□□□ -2.03
CDX4O14627 AC007014.2-201ENST00000615581 479 ntBASIC2.37□□□□□ -2.03
CDX4O14627 AC073534.2-201ENST00000620377 381 ntBASIC2.37□□□□□ -2.03
CDX4O14627 AL589994.2-201ENST00000621124 579 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms