Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 RNU1-58P-201ENST00000362413 163 ntBASIC0.51□□□□□ -2.33
HMGN4O00479 RNU6-17P-201ENST00000384245 107 ntBASIC0.51□□□□□ -2.33
HMGN4O00479 RNU6-18P-201ENST00000384527 107 ntBASIC0.51□□□□□ -2.33
HMGN4O00479 MIR506-201ENST00000384998 124 ntBASIC0.51□□□□□ -2.33
HMGN4O00479 MIR100-201ENST00000385259 80 ntBASIC0.51□□□□□ -2.33
HMGN4O00479 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
HMGN4O00479 AC127391.1-201ENST00000411737 98 ntBASIC0.51□□□□□ -2.33
HMGN4O00479 AC069282.1-201ENST00000411911 526 ntBASIC0.51□□□□□ -2.33
HMGN4O00479 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.51□□□□□ -2.33
HMGN4O00479 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.51□□□□□ -2.33
HMGN4O00479 AC139712.2-201ENST00000424302 339 ntBASIC0.51□□□□□ -2.33
HMGN4O00479 UBE2V2P3-201ENST00000433562 437 ntBASIC0.51□□□□□ -2.33
HMGN4O00479 AL353706.1-201ENST00000436728 494 ntBASIC0.51□□□□□ -2.33
HMGN4O00479 SNRPEP9-201ENST00000436794 238 ntBASIC0.51□□□□□ -2.33
HMGN4O00479 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.51□□□□□ -2.33
HMGN4O00479 AC114982.1-201ENST00000469402 321 ntBASIC0.51□□□□□ -2.33
HMGN4O00479 AC079598.5-201ENST00000547460 117 ntBASIC0.51□□□□□ -2.33
HMGN4O00479 AC092125.1-201ENST00000562568 1995 ntBASIC0.51□□□□□ -2.33
HMGN4O00479 MIR4653-201ENST00000585107 83 ntBASIC0.51□□□□□ -2.33
HMGN4O00479 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.51□□□□□ -2.33
HMGN4O00479 AC073544.2-201ENST00000601155 540 ntBASIC0.51□□□□□ -2.33
HMGN4O00479 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC0.51□□□□□ -2.33
HMGN4O00479 BBIP1P1-201ENST00000602999 279 ntBASIC0.51□□□□□ -2.33
HMGN4O00479 DUXAP11-201ENST00000603858 526 ntBASIC0.51□□□□□ -2.33
HMGN4O00479 AC087045.1-201ENST00000605856 382 ntBASIC0.51□□□□□ -2.33
HMGN4O00479 AL022345.1-201ENST00000607292 135 ntBASIC0.51□□□□□ -2.33
HMGN4O00479 AC011939.3-201ENST00000613686 466 ntBASIC0.51□□□□□ -2.33
HMGN4O00479 AC013476.2-201ENST00000614456 459 ntBASIC0.51□□□□□ -2.33
HMGN4O00479 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC0.51□□□□□ -2.33
HMGN4O00479 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.51□□□□□ -2.33
HMGN4O00479 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.51□□□□□ -2.33
HMGN4O00479 HAUS6P2-201ENST00000433254 2404 ntBASIC0.5□□□□□ -2.33
HMGN4O00479 RNU6-1164P-201ENST00000364428 107 ntBASIC0.5□□□□□ -2.33
HMGN4O00479 SNORD14D-201ENST00000384390 87 ntBASIC0.5□□□□□ -2.33
HMGN4O00479 RPL26P27-201ENST00000414397 437 ntBASIC0.5□□□□□ -2.33
HMGN4O00479 POLR2J4-204ENST00000418424 324 ntBASIC0.5□□□□□ -2.33
HMGN4O00479 PIGFP2-201ENST00000421400 651 ntBASIC0.5□□□□□ -2.33
HMGN4O00479 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.5□□□□□ -2.33
HMGN4O00479 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.5□□□□□ -2.33
HMGN4O00479 DUXAP8-207ENST00000456786 622 ntBASIC0.5□□□□□ -2.33
HMGN4O00479 Y_RNA.638-201ENST00000459374 113 ntBASIC0.5□□□□□ -2.33
HMGN4O00479 MEMO1P3-201ENST00000459811 302 ntBASIC0.5□□□□□ -2.33
HMGN4O00479 RPL21P47-201ENST00000483696 477 ntBASIC0.5□□□□□ -2.33
HMGN4O00479 ATP5EP1-201ENST00000510257 156 ntBASIC0.5□□□□□ -2.33
HMGN4O00479 SNORA31.17-201ENST00000516953 127 ntBASIC0.5□□□□□ -2.33
HMGN4O00479 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.5□□□□□ -2.33
HMGN4O00479 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.5□□□□□ -2.33
HMGN4O00479 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.5□□□□□ -2.33
HMGN4O00479 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.5□□□□□ -2.33
HMGN4O00479 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC0.5□□□□□ -2.33
HMGN4O00479 ADAM3B-201ENST00000569937 840 ntBASIC0.5□□□□□ -2.33
HMGN4O00479 AC012213.3-201ENST00000577199 777 ntBASIC0.5□□□□□ -2.33
HMGN4O00479 NDUFA8P1-201ENST00000605525 367 ntBASIC0.5□□□□□ -2.33
HMGN4O00479 AC107075.1-201ENST00000613695 314 ntBASIC0.5□□□□□ -2.33
HMGN4O00479 HSBP1P2-201ENST00000299671 229 ntBASIC0.49□□□□□ -2.33
HMGN4O00479 NACAP2-201ENST00000318548 624 ntBASIC0.49□□□□□ -2.33
HMGN4O00479 RNU6-707P-201ENST00000364647 95 ntBASIC0.49□□□□□ -2.33
HMGN4O00479 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.49□□□□□ -2.33
HMGN4O00479 RNU6-968P-201ENST00000384076 107 ntBASIC0.49□□□□□ -2.33
HMGN4O00479 RNU2-48P-201ENST00000410694 191 ntBASIC0.49□□□□□ -2.33
HMGN4O00479 AL353621.1-201ENST00000418219 243 ntBASIC0.49□□□□□ -2.33
HMGN4O00479 AL606490.4-201ENST00000423117 127 ntBASIC0.49□□□□□ -2.33
HMGN4O00479 FAM204CP-201ENST00000424489 642 ntBASIC0.49□□□□□ -2.33
HMGN4O00479 NANOGP2-201ENST00000435391 727 ntBASIC0.49□□□□□ -2.33
HMGN4O00479 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC0.49□□□□□ -2.33
HMGN4O00479 PGBD4P5-201ENST00000445958 426 ntBASIC0.49□□□□□ -2.33
HMGN4O00479 RPS29P1-201ENST00000465274 159 ntBASIC0.49□□□□□ -2.33
HMGN4O00479 AC108729.1-201ENST00000487812 947 ntBASIC0.49□□□□□ -2.33
HMGN4O00479 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.49□□□□□ -2.33
HMGN4O00479 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.49□□□□□ -2.33
HMGN4O00479 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC0.49□□□□□ -2.33
HMGN4O00479 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.49□□□□□ -2.33
HMGN4O00479 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.49□□□□□ -2.33
HMGN4O00479 PSMA3P-201ENST00000555485 635 ntBASIC0.49□□□□□ -2.33
HMGN4O00479 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC0.49□□□□□ -2.33
HMGN4O00479 MIR4714-201ENST00000580728 77 ntBASIC0.49□□□□□ -2.33
HMGN4O00479 MIR4661-201ENST00000582720 75 ntBASIC0.49□□□□□ -2.33
HMGN4O00479 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.49□□□□□ -2.33
HMGN4O00479 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC0.49□□□□□ -2.33
HMGN4O00479 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.49□□□□□ -2.33
HMGN4O00479 AP001429.1-201ENST00000602568 530 ntBASIC0.49□□□□□ -2.33
HMGN4O00479 AC239868.4-201ENST00000608318 671 ntBASIC0.49□□□□□ -2.33
HMGN4O00479 AC017037.3-201ENST00000625016 472 ntBASIC0.49□□□□□ -2.33
HMGN4O00479 AC119674.1-220ENST00000641502 1048 ntBASIC0.49□□□□□ -2.33
HMGN4O00479 AL138713.1-201ENST00000624026 2130 ntBASIC0.49□□□□□ -2.33
HMGN4O00479 MIR1302-8-201ENST00000408342 128 ntBASIC0.48□□□□□ -2.33
HMGN4O00479 MIR1267-201ENST00000408723 78 ntBASIC0.48□□□□□ -2.33
HMGN4O00479 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.48□□□□□ -2.33
HMGN4O00479 NCOR1P3-201ENST00000420479 303 ntBASIC0.48□□□□□ -2.33
HMGN4O00479 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.48□□□□□ -2.33
HMGN4O00479 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.48□□□□□ -2.33
HMGN4O00479 MOB1AP2-201ENST00000446060 614 ntBASIC0.48□□□□□ -2.33
HMGN4O00479 AL353691.1-201ENST00000451332 387 ntBASIC0.48□□□□□ -2.33
HMGN4O00479 AL157398.1-201ENST00000452981 186 ntBASIC0.48□□□□□ -2.33
HMGN4O00479 RPL31P3-201ENST00000458430 332 ntBASIC0.48□□□□□ -2.33
HMGN4O00479 ACA64.5-201ENST00000516207 127 ntBASIC0.48□□□□□ -2.33
HMGN4O00479 SCARNA16.2-201ENST00000516520 172 ntBASIC0.48□□□□□ -2.33
HMGN4O00479 NRON-201ENST00000517270 370 ntBASIC0.48□□□□□ -2.33
HMGN4O00479 AC019176.1-201ENST00000518519 225 ntBASIC0.48□□□□□ -2.33
HMGN4O00479 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms