Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 MTND3P21-201ENST00000433774 331 ntBASIC2.64□□□□□ -1.99
RTCAO00442 AL591212.2-201ENST00000433923 257 ntBASIC2.64□□□□□ -1.99
RTCAO00442 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.64□□□□□ -1.99
RTCAO00442 AC016691.1-201ENST00000441321 413 ntBASIC2.64□□□□□ -1.99
RTCAO00442 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.64□□□□□ -1.99
RTCAO00442 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
RTCAO00442 AL356010.1-201ENST00000456364 102 ntBASIC2.64□□□□□ -1.99
RTCAO00442 AC108078.2-201ENST00000510750 236 ntBASIC2.64□□□□□ -1.99
RTCAO00442 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.64□□□□□ -1.99
RTCAO00442 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.64□□□□□ -1.99
RTCAO00442 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.64□□□□□ -1.99
RTCAO00442 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.64□□□□□ -1.99
RTCAO00442 AP003122.3-201ENST00000526316 255 ntBASIC2.64□□□□□ -1.99
RTCAO00442 AC084851.1-201ENST00000529105 249 ntBASIC2.64□□□□□ -1.99
RTCAO00442 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.64□□□□□ -1.99
RTCAO00442 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.64□□□□□ -1.99
RTCAO00442 AC079600.2-201ENST00000550076 130 ntBASIC2.64□□□□□ -1.99
RTCAO00442 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.64□□□□□ -1.99
RTCAO00442 AL121821.2-201ENST00000556081 394 ntBASIC2.64□□□□□ -1.99
RTCAO00442 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.64□□□□□ -1.99
RTCAO00442 BNIP3P9-201ENST00000603714 553 ntBASIC2.64□□□□□ -1.99
RTCAO00442 AC017083.3-201ENST00000609955 700 ntBASIC2.64□□□□□ -1.99
RTCAO00442 AC012409.4-201ENST00000612923 249 ntBASIC2.64□□□□□ -1.99
RTCAO00442 AC024581.2-201ENST00000619986 252 ntBASIC2.64□□□□□ -1.99
RTCAO00442 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
RTCAO00442 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
RTCAO00442 ASNSP3-201ENST00000451989 1306 ntBASIC2.64□□□□□ -1.99
RTCAO00442 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
RTCAO00442 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.63□□□□□ -1.99
RTCAO00442 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
RTCAO00442 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.63□□□□□ -1.99
RTCAO00442 RNU6-179P-201ENST00000363350 107 ntBASIC2.63□□□□□ -1.99
RTCAO00442 RNU4-75P-201ENST00000364621 146 ntBASIC2.63□□□□□ -1.99
RTCAO00442 RNU4-48P-201ENST00000365559 182 ntBASIC2.63□□□□□ -1.99
RTCAO00442 MIR301A-201ENST00000385261 86 ntBASIC2.63□□□□□ -1.99
RTCAO00442 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
RTCAO00442 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
RTCAO00442 MTATP6P18-201ENST00000417994 673 ntBASIC2.63□□□□□ -1.99
RTCAO00442 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.63□□□□□ -1.99
RTCAO00442 CALM2P2-201ENST00000428512 440 ntBASIC2.63□□□□□ -1.99
RTCAO00442 TIMM9P3-201ENST00000428659 274 ntBASIC2.63□□□□□ -1.99
RTCAO00442 AC073464.1-201ENST00000429823 534 ntBASIC2.63□□□□□ -1.99
RTCAO00442 RPL23AP83-201ENST00000434984 473 ntBASIC2.63□□□□□ -1.99
RTCAO00442 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.63□□□□□ -1.99
RTCAO00442 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
RTCAO00442 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.63□□□□□ -1.99
RTCAO00442 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.63□□□□□ -1.99
RTCAO00442 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.63□□□□□ -1.99
RTCAO00442 RNU6-720P-201ENST00000516363 108 ntBASIC2.63□□□□□ -1.99
RTCAO00442 RNU6-914P-201ENST00000516749 109 ntBASIC2.63□□□□□ -1.99
RTCAO00442 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.63□□□□□ -1.99
RTCAO00442 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.63□□□□□ -1.99
RTCAO00442 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.63□□□□□ -1.99
RTCAO00442 MIR4775-201ENST00000581168 75 ntBASIC2.63□□□□□ -1.99
RTCAO00442 AP001596.2-201ENST00000608410 312 ntBASIC2.63□□□□□ -1.99
RTCAO00442 AC069234.5-201ENST00000611056 416 ntBASIC2.63□□□□□ -1.99
RTCAO00442 U4atac.1-201ENST00000618345 95 ntBASIC2.63□□□□□ -1.99
RTCAO00442 MIR6733-201ENST00000635723 61 ntBASIC2.63□□□□□ -1.99
RTCAO00442 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
RTCAO00442 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
RTCAO00442 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
RTCAO00442 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
RTCAO00442 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
RTCAO00442 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
RTCAO00442 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.62□□□□□ -1.99
RTCAO00442 AL139276.1-201ENST00000311910 1001 ntBASIC2.62□□□□□ -1.99
RTCAO00442 RNU1-112P-201ENST00000364401 164 ntBASIC2.62□□□□□ -1.99
RTCAO00442 Y_RNA.296-201ENST00000364930 108 ntBASIC2.62□□□□□ -1.99
RTCAO00442 RNU6-456P-201ENST00000384493 107 ntBASIC2.62□□□□□ -1.99
RTCAO00442 MIR218-1-201ENST00000384999 110 ntBASIC2.62□□□□□ -1.99
RTCAO00442 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
RTCAO00442 RPS4XP8-201ENST00000402039 771 ntBASIC2.62□□□□□ -1.99
RTCAO00442 AL590004.2-201ENST00000404787 371 ntBASIC2.62□□□□□ -1.99
RTCAO00442 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.62□□□□□ -1.99
RTCAO00442 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.62□□□□□ -1.99
RTCAO00442 CYCSP48-201ENST00000417124 323 ntBASIC2.62□□□□□ -1.99
RTCAO00442 RPL30P4-201ENST00000429309 333 ntBASIC2.62□□□□□ -1.99
RTCAO00442 AC087499.2-201ENST00000432861 149 ntBASIC2.62□□□□□ -1.99
RTCAO00442 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.62□□□□□ -1.99
RTCAO00442 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.62□□□□□ -1.99
RTCAO00442 AC003071.1-201ENST00000451219 789 ntBASIC2.62□□□□□ -1.99
RTCAO00442 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.62□□□□□ -1.99
RTCAO00442 AC008571.1-201ENST00000467232 300 ntBASIC2.62□□□□□ -1.99
RTCAO00442 GMFBP1-201ENST00000467831 427 ntBASIC2.62□□□□□ -1.99
RTCAO00442 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.62□□□□□ -1.99
RTCAO00442 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.62□□□□□ -1.99
RTCAO00442 SUB1P2-201ENST00000556401 297 ntBASIC2.62□□□□□ -1.99
RTCAO00442 AL133241.1-201ENST00000556832 487 ntBASIC2.62□□□□□ -1.99
RTCAO00442 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.62□□□□□ -1.99
RTCAO00442 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.62□□□□□ -1.99
RTCAO00442 AC008521.1-201ENST00000587471 187 ntBASIC2.62□□□□□ -1.99
RTCAO00442 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.62□□□□□ -1.99
RTCAO00442 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.62□□□□□ -1.99
RTCAO00442 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.62□□□□□ -1.99
RTCAO00442 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.62□□□□□ -1.99
RTCAO00442 AL391646.1-201ENST00000603860 190 ntBASIC2.62□□□□□ -1.99
RTCAO00442 AC025034.2-201ENST00000623264 286 ntBASIC2.62□□□□□ -1.99
RTCAO00442 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.62□□□□□ -1.99
RTCAO00442 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
RTCAO00442 Z82195.2-201ENST00000612348 18351 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 530.1 ms