Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 AL136360.1-201ENST00000503377 1900 ntBASIC4.6□□□□□ -1.67
RNF223E7ERA6 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF223E7ERA6 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF223E7ERA6 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
RNF223E7ERA6 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF223E7ERA6 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF223E7ERA6 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF223E7ERA6 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RNF223E7ERA6 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RNF223E7ERA6 DCN-218ENST00000551354 2924 ntTSL 3 BASIC4.59□□□□□ -1.67
RNF223E7ERA6 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RNF223E7ERA6 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
RNF223E7ERA6 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.59□□□□□ -1.67
RNF223E7ERA6 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.59□□□□□ -1.67
RNF223E7ERA6 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RNF223E7ERA6 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
RNF223E7ERA6 SNORA26-201ENST00000391286 122 ntBASIC4.59□□□□□ -1.67
RNF223E7ERA6 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.59□□□□□ -1.67
RNF223E7ERA6 MIR873-201ENST00000401120 77 ntBASIC4.59□□□□□ -1.67
RNF223E7ERA6 AC002075.2-201ENST00000425207 252 ntBASIC4.59□□□□□ -1.67
RNF223E7ERA6 AL591419.1-201ENST00000427423 339 ntBASIC4.59□□□□□ -1.67
RNF223E7ERA6 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RNF223E7ERA6 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.59□□□□□ -1.67
RNF223E7ERA6 RPL35AP15-201ENST00000468042 339 ntBASIC4.59□□□□□ -1.67
RNF223E7ERA6 AL035690.1-201ENST00000490892 383 ntBASIC4.59□□□□□ -1.67
RNF223E7ERA6 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.59□□□□□ -1.67
RNF223E7ERA6 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC4.59□□□□□ -1.67
RNF223E7ERA6 SNORD77.4-201ENST00000516158 81 ntBASIC4.59□□□□□ -1.67
RNF223E7ERA6 RNU6-581P-201ENST00000516214 105 ntBASIC4.59□□□□□ -1.67
RNF223E7ERA6 RNU6-113P-201ENST00000516653 101 ntBASIC4.59□□□□□ -1.67
RNF223E7ERA6 SCARNA16.4-201ENST00000516956 187 ntBASIC4.59□□□□□ -1.67
RNF223E7ERA6 EIF4A1P12-201ENST00000551910 141 ntBASIC4.59□□□□□ -1.67
RNF223E7ERA6 MIR4480-201ENST00000582492 71 ntBASIC4.59□□□□□ -1.67
RNF223E7ERA6 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RNF223E7ERA6 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
RNF223E7ERA6 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RNF223E7ERA6 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RNF223E7ERA6 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RNF223E7ERA6 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
RNF223E7ERA6 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
RNF223E7ERA6 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.68
RNF223E7ERA6 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
RNF223E7ERA6 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.58□□□□□ -1.68
RNF223E7ERA6 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RNF223E7ERA6 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RNF223E7ERA6 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
RNF223E7ERA6 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RNF223E7ERA6 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RNF223E7ERA6 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
RNF223E7ERA6 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
RNF223E7ERA6 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RNF223E7ERA6 Y_RNA.342-201ENST00000365352 113 ntBASIC4.58□□□□□ -1.68
RNF223E7ERA6 U3.15-201ENST00000365398 212 ntBASIC4.58□□□□□ -1.68
RNF223E7ERA6 SNORA16A-201ENST00000384342 137 ntBASIC4.58□□□□□ -1.68
RNF223E7ERA6 MIR548B-201ENST00000385247 97 ntBASIC4.58□□□□□ -1.68
RNF223E7ERA6 AL009179.1-201ENST00000406085 265 ntBASIC4.58□□□□□ -1.68
RNF223E7ERA6 U3.36-201ENST00000408418 213 ntBASIC4.58□□□□□ -1.68
RNF223E7ERA6 Y_RNA.593-201ENST00000410292 98 ntBASIC4.58□□□□□ -1.68
RNF223E7ERA6 SNORA19.1-201ENST00000410656 129 ntBASIC4.58□□□□□ -1.68
RNF223E7ERA6 AC244098.2-201ENST00000422068 99 ntBASIC4.58□□□□□ -1.68
RNF223E7ERA6 AC092017.2-201ENST00000427600 362 ntBASIC4.58□□□□□ -1.68
RNF223E7ERA6 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.58□□□□□ -1.68
RNF223E7ERA6 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.58□□□□□ -1.68
RNF223E7ERA6 AC083982.1-201ENST00000485679 344 ntBASIC4.58□□□□□ -1.68
RNF223E7ERA6 AC078817.1-201ENST00000492623 435 ntBASIC4.58□□□□□ -1.68
RNF223E7ERA6 SNORA31.8-201ENST00000516327 108 ntBASIC4.58□□□□□ -1.68
RNF223E7ERA6 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.58□□□□□ -1.68
RNF223E7ERA6 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.58□□□□□ -1.68
RNF223E7ERA6 MIR5009-201ENST00000578736 100 ntBASIC4.58□□□□□ -1.68
RNF223E7ERA6 AL365205.2-201ENST00000594586 68 ntBASIC4.58□□□□□ -1.68
RNF223E7ERA6 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.58□□□□□ -1.68
RNF223E7ERA6 AC093732.2-201ENST00000607950 274 ntBASIC4.58□□□□□ -1.68
RNF223E7ERA6 AC109583.2-201ENST00000617367 129 ntBASIC4.58□□□□□ -1.68
RNF223E7ERA6 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
RNF223E7ERA6 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RNF223E7ERA6 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.58□□□□□ -1.68
RNF223E7ERA6 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RNF223E7ERA6 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC4.58□□□□□ -1.68
RNF223E7ERA6 AC144833.1-201ENST00000567953 4089 ntBASIC4.58□□□□□ -1.68
RNF223E7ERA6 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.58□□□□□ -1.68
RNF223E7ERA6 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RNF223E7ERA6 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
RNF223E7ERA6 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RNF223E7ERA6 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.58□□□□□ -1.68
RNF223E7ERA6 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RNF223E7ERA6 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RNF223E7ERA6 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
RNF223E7ERA6 MIR302B-201ENST00000362188 73 ntBASIC4.57□□□□□ -1.68
RNF223E7ERA6 GNG5P2-201ENST00000372054 207 ntBASIC4.57□□□□□ -1.68
RNF223E7ERA6 SNORA18.2-201ENST00000383865 132 ntBASIC4.57□□□□□ -1.68
RNF223E7ERA6 BX284632.1-201ENST00000478218 541 ntBASIC4.57□□□□□ -1.68
RNF223E7ERA6 RNA5SP236-201ENST00000516169 116 ntBASIC4.57□□□□□ -1.68
RNF223E7ERA6 RNU2-44P-201ENST00000516795 194 ntBASIC4.57□□□□□ -1.68
RNF223E7ERA6 RPL10P14-201ENST00000565265 298 ntBASIC4.57□□□□□ -1.68
RNF223E7ERA6 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.57□□□□□ -1.68
RNF223E7ERA6 MIR3934-201ENST00000579806 107 ntBASIC4.57□□□□□ -1.68
RNF223E7ERA6 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.57□□□□□ -1.68
RNF223E7ERA6 AC006065.5-201ENST00000623427 349 ntBASIC4.57□□□□□ -1.68
RNF223E7ERA6 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.57□□□□□ -1.68
RNF223E7ERA6 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms