Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AP001340.1-201ENST00000624405 217 ntBASIC5.26□□□□□ -1.57
RCCD1A6NED2 AC022893.2-201ENST00000564832 3296 ntBASIC5.26□□□□□ -1.57
RCCD1A6NED2 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
RCCD1A6NED2 AC010329.5-201ENST00000623497 2174 ntBASIC5.26□□□□□ -1.57
RCCD1A6NED2 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.26□□□□□ -1.57
RCCD1A6NED2 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RCCD1A6NED2 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RCCD1A6NED2 AC134026.1-201ENST00000623249 2239 ntBASIC5.25□□□□□ -1.57
RCCD1A6NED2 AC093591.2-201ENST00000565254 3843 ntBASIC5.25□□□□□ -1.57
RCCD1A6NED2 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RCCD1A6NED2 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RCCD1A6NED2 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.25□□□□□ -1.57
RCCD1A6NED2 RNU1-83P-201ENST00000363426 164 ntBASIC5.25□□□□□ -1.57
RCCD1A6NED2 RNU4-10P-201ENST00000364383 140 ntBASIC5.25□□□□□ -1.57
RCCD1A6NED2 RNU1-43P-201ENST00000365052 165 ntBASIC5.25□□□□□ -1.57
RCCD1A6NED2 RNU6-429P-201ENST00000384582 108 ntBASIC5.25□□□□□ -1.57
RCCD1A6NED2 RNU6-476P-201ENST00000384726 107 ntBASIC5.25□□□□□ -1.57
RCCD1A6NED2 SNORA26.5-201ENST00000391215 123 ntBASIC5.25□□□□□ -1.57
RCCD1A6NED2 AL357515.1-201ENST00000402967 542 ntBASIC5.25□□□□□ -1.57
RCCD1A6NED2 RPSAP50-201ENST00000481955 852 ntBASIC5.25□□□□□ -1.57
RCCD1A6NED2 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC5.25□□□□□ -1.57
RCCD1A6NED2 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC5.25□□□□□ -1.57
RCCD1A6NED2 AC127455.1-201ENST00000565496 145 ntBASIC5.25□□□□□ -1.57
RCCD1A6NED2 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.25□□□□□ -1.57
RCCD1A6NED2 AL021997.2-201ENST00000615674 271 ntBASIC5.25□□□□□ -1.57
RCCD1A6NED2 DHX9P1-201ENST00000436565 3076 ntBASIC5.25□□□□□ -1.57
RCCD1A6NED2 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RCCD1A6NED2 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RCCD1A6NED2 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
RCCD1A6NED2 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
RCCD1A6NED2 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
RCCD1A6NED2 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
RCCD1A6NED2 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.25□□□□□ -1.57
RCCD1A6NED2 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RCCD1A6NED2 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC5.24□□□□□ -1.57
RCCD1A6NED2 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
RCCD1A6NED2 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RCCD1A6NED2 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RCCD1A6NED2 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
RCCD1A6NED2 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RCCD1A6NED2 RNU6-799P-201ENST00000363567 107 ntBASIC5.24□□□□□ -1.57
RCCD1A6NED2 RNU6-727P-201ENST00000363592 107 ntBASIC5.24□□□□□ -1.57
RCCD1A6NED2 RNU6-270P-201ENST00000364131 105 ntBASIC5.24□□□□□ -1.57
RCCD1A6NED2 RNU6-217P-201ENST00000384164 104 ntBASIC5.24□□□□□ -1.57
RCCD1A6NED2 MIR616-201ENST00000385293 97 ntBASIC5.24□□□□□ -1.57
RCCD1A6NED2 SNORD96B-201ENST00000386148 79 ntBASIC5.24□□□□□ -1.57
RCCD1A6NED2 PTMAP3-201ENST00000447474 330 ntBASIC5.24□□□□□ -1.57
RCCD1A6NED2 RPL39P29-201ENST00000447779 157 ntBASIC5.24□□□□□ -1.57
RCCD1A6NED2 AC000111.2-201ENST00000448200 210 ntBASIC5.24□□□□□ -1.57
RCCD1A6NED2 AC012308.1-201ENST00000451232 178 ntBASIC5.24□□□□□ -1.57
RCCD1A6NED2 RN7SL177P-201ENST00000476596 299 ntBASIC5.24□□□□□ -1.57
RCCD1A6NED2 RN7SL629P-201ENST00000489622 285 ntBASIC5.24□□□□□ -1.57
RCCD1A6NED2 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC5.24□□□□□ -1.57
RCCD1A6NED2 RNU6-1007P-201ENST00000516586 107 ntBASIC5.24□□□□□ -1.57
RCCD1A6NED2 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC5.24□□□□□ -1.57
RCCD1A6NED2 AC051619.2-201ENST00000559063 397 ntBASIC5.24□□□□□ -1.57
RCCD1A6NED2 MIR3646-201ENST00000578301 84 ntBASIC5.24□□□□□ -1.57
RCCD1A6NED2 MIR4489-201ENST00000578869 62 ntBASIC5.24□□□□□ -1.57
RCCD1A6NED2 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.24□□□□□ -1.57
RCCD1A6NED2 AL022401.1-201ENST00000619498 108 ntBASIC5.24□□□□□ -1.57
RCCD1A6NED2 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
RCCD1A6NED2 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RCCD1A6NED2 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RCCD1A6NED2 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC5.24□□□□□ -1.57
RCCD1A6NED2 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
RCCD1A6NED2 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RCCD1A6NED2 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RCCD1A6NED2 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
RCCD1A6NED2 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RCCD1A6NED2 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.23□□□□□ -1.57
RCCD1A6NED2 AF127577.6-201ENST00000623352 2191 ntBASIC5.23□□□□□ -1.57
RCCD1A6NED2 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.23□□□□□ -1.57
RCCD1A6NED2 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.23□□□□□ -1.57
RCCD1A6NED2 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.23□□□□□ -1.57
RCCD1A6NED2 AL133383.2-201ENST00000622958 2336 ntBASIC5.23□□□□□ -1.57
RCCD1A6NED2 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RCCD1A6NED2 DLEU2_6.3-201ENST00000340052 136 ntBASIC5.23□□□□□ -1.57
RCCD1A6NED2 Y_RNA.24-201ENST00000362508 103 ntBASIC5.23□□□□□ -1.57
RCCD1A6NED2 RNA5SP267-201ENST00000364893 126 ntBASIC5.23□□□□□ -1.57
RCCD1A6NED2 RNU6-1264P-201ENST00000383891 107 ntBASIC5.23□□□□□ -1.57
RCCD1A6NED2 SNORA18.3-201ENST00000384122 132 ntBASIC5.23□□□□□ -1.57
RCCD1A6NED2 RPS26P39-201ENST00000469206 341 ntBASIC5.23□□□□□ -1.57
RCCD1A6NED2 RNU6-1282P-201ENST00000516735 96 ntBASIC5.23□□□□□ -1.57
RCCD1A6NED2 AP001328.1-201ENST00000528550 176 ntBASIC5.23□□□□□ -1.57
RCCD1A6NED2 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC5.23□□□□□ -1.57
RCCD1A6NED2 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.23□□□□□ -1.57
RCCD1A6NED2 NACAP3-201ENST00000552100 481 ntBASIC5.23□□□□□ -1.57
RCCD1A6NED2 AC005255.1-201ENST00000593748 216 ntBASIC5.23□□□□□ -1.57
RCCD1A6NED2 AL591926.8-201ENST00000616876 211 ntBASIC5.23□□□□□ -1.57
RCCD1A6NED2 DLEU2_6.2-201ENST00000620994 136 ntBASIC5.23□□□□□ -1.57
RCCD1A6NED2 MIR3529-201ENST00000637713 78 ntBASIC5.23□□□□□ -1.57
RCCD1A6NED2 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
RCCD1A6NED2 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RCCD1A6NED2 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RCCD1A6NED2 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RCCD1A6NED2 MAPK10-349ENST00000641767 3661 ntBASIC5.22□□□□□ -1.57
RCCD1A6NED2 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RCCD1A6NED2 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
RCCD1A6NED2 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.22□□□□□ -1.57
RCCD1A6NED2 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms