Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
LINC01558Q9Y6Z2 NACAP2-201ENST00000318548 624 ntBASIC0.29□□□□□ -2.36
LINC01558Q9Y6Z2 AC138393.1-203ENST00000327086 343 ntBASIC0.29□□□□□ -2.36
LINC01558Q9Y6Z2 RNU6-252P-201ENST00000363232 107 ntBASIC0.29□□□□□ -2.36
LINC01558Q9Y6Z2 Y_RNA.255-201ENST00000364581 97 ntBASIC0.29□□□□□ -2.36
LINC01558Q9Y6Z2 RNU6-1274P-201ENST00000384557 107 ntBASIC0.29□□□□□ -2.36
LINC01558Q9Y6Z2 RNU6-296P-201ENST00000384608 107 ntBASIC0.29□□□□□ -2.36
LINC01558Q9Y6Z2 AC114482.1-201ENST00000418010 247 ntBASIC0.29□□□□□ -2.36
LINC01558Q9Y6Z2 AC093422.3-201ENST00000428506 305 ntBASIC0.29□□□□□ -2.36
LINC01558Q9Y6Z2 KRTAP19-11P-201ENST00000439851 104 ntBASIC0.29□□□□□ -2.36
LINC01558Q9Y6Z2 MTND2P4-201ENST00000445034 1004 ntBASIC0.29□□□□□ -2.36
LINC01558Q9Y6Z2 AC104058.1-201ENST00000448028 297 ntBASIC0.29□□□□□ -2.36
LINC01558Q9Y6Z2 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
LINC01558Q9Y6Z2 MTND3P4-201ENST00000453537 303 ntBASIC0.29□□□□□ -2.36
LINC01558Q9Y6Z2 SNRPFP4-201ENST00000456366 242 ntBASIC0.29□□□□□ -2.36
LINC01558Q9Y6Z2 NDUFAF4P3-201ENST00000456468 525 ntBASIC0.29□□□□□ -2.36
LINC01558Q9Y6Z2 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC0.29□□□□□ -2.36
LINC01558Q9Y6Z2 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.29□□□□□ -2.36
LINC01558Q9Y6Z2 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
LINC01558Q9Y6Z2 AC048346.1-201ENST00000510247 144 ntBASIC0.29□□□□□ -2.36
LINC01558Q9Y6Z2 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.29□□□□□ -2.36
LINC01558Q9Y6Z2 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
LINC01558Q9Y6Z2 AC090142.3-201ENST00000519012 385 ntBASIC0.29□□□□□ -2.36
LINC01558Q9Y6Z2 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.29□□□□□ -2.36
LINC01558Q9Y6Z2 AP003484.1-201ENST00000530974 250 ntBASIC0.29□□□□□ -2.36
LINC01558Q9Y6Z2 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.29□□□□□ -2.36
LINC01558Q9Y6Z2 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.29□□□□□ -2.36
LINC01558Q9Y6Z2 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC0.29□□□□□ -2.36
LINC01558Q9Y6Z2 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.29□□□□□ -2.36
LINC01558Q9Y6Z2 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.29□□□□□ -2.36
LINC01558Q9Y6Z2 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC0.29□□□□□ -2.36
LINC01558Q9Y6Z2 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC0.29□□□□□ -2.36
LINC01558Q9Y6Z2 MIR3169-201ENST00000578032 83 ntBASIC0.29□□□□□ -2.36
LINC01558Q9Y6Z2 BNIP3P16-201ENST00000589779 534 ntBASIC0.29□□□□□ -2.36
LINC01558Q9Y6Z2 AC011451.2-201ENST00000604303 598 ntBASIC0.29□□□□□ -2.36
LINC01558Q9Y6Z2 AC009318.2-201ENST00000610917 651 ntBASIC0.29□□□□□ -2.36
LINC01558Q9Y6Z2 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.29□□□□□ -2.36
LINC01558Q9Y6Z2 AC233981.2-201ENST00000611524 1614 ntBASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 RNA5SP493-201ENST00000364115 91 ntBASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 SNORD114-24-201ENST00000365029 72 ntBASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 MIR605-201ENST00000385078 83 ntBASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 RNU6-360P-201ENST00000390944 104 ntBASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 BTF3L4P3-201ENST00000418879 476 ntBASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 AC010099.3-201ENST00000423896 409 ntBASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 SNX2P2-201ENST00000424553 323 ntBASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 SNRPEP7-201ENST00000438350 220 ntBASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 HMGN2P18-201ENST00000450680 270 ntBASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 RPL7P43-201ENST00000478876 753 ntBASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 AC004924.1-201ENST00000480160 781 ntBASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 COX6CP6-201ENST00000490840 228 ntBASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 RNU4-54P-201ENST00000516428 129 ntBASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 RNA5SP121-201ENST00000516537 101 ntBASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 RNU5B-3P-201ENST00000516601 115 ntBASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 RNU6-1092P-201ENST00000516955 87 ntBASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 CBX3P8-201ENST00000532412 525 ntBASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 AC067805.1-201ENST00000559344 470 ntBASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 MIR4421-201ENST00000578133 69 ntBASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 MIR4310-201ENST00000582950 57 ntBASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 AC005786.1-201ENST00000588553 154 ntBASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 AC012065.4-201ENST00000602445 679 ntBASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 AC007179.3-201ENST00000604976 235 ntBASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 AC107952.2-201ENST00000606048 486 ntBASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 AL355802.4-201ENST00000607635 548 ntBASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 AC096586.1-201ENST00000610267 561 ntBASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 MIR6862-1-201ENST00000613016 70 ntBASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 MIR6845-201ENST00000613182 61 ntBASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 MIR6857-201ENST00000613267 93 ntBASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 MIR6862-2-201ENST00000614755 70 ntBASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
LINC01558Q9Y6Z2 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.28□□□□□ -2.37
LINC01558Q9Y6Z2 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.27□□□□□ -2.37
LINC01558Q9Y6Z2 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
LINC01558Q9Y6Z2 RNU6-582P-201ENST00000362989 107 ntBASIC0.27□□□□□ -2.37
LINC01558Q9Y6Z2 RNU6-1280P-201ENST00000365211 107 ntBASIC0.27□□□□□ -2.37
LINC01558Q9Y6Z2 RNA5SP190-201ENST00000365222 118 ntBASIC0.27□□□□□ -2.37
LINC01558Q9Y6Z2 RNU6-160P-201ENST00000384591 107 ntBASIC0.27□□□□□ -2.37
LINC01558Q9Y6Z2 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
LINC01558Q9Y6Z2 U8.13-201ENST00000390842 128 ntBASIC0.27□□□□□ -2.37
LINC01558Q9Y6Z2 RNU6-482P-201ENST00000391068 107 ntBASIC0.27□□□□□ -2.37
LINC01558Q9Y6Z2 RN7SKP192-201ENST00000411291 327 ntBASIC0.27□□□□□ -2.37
LINC01558Q9Y6Z2 RPS12P24-201ENST00000412619 387 ntBASIC0.27□□□□□ -2.37
LINC01558Q9Y6Z2 AL136133.1-201ENST00000413694 376 ntBASIC0.27□□□□□ -2.37
LINC01558Q9Y6Z2 TRIM60P5Y-201ENST00000413946 574 ntBASIC0.27□□□□□ -2.37
LINC01558Q9Y6Z2 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.27□□□□□ -2.37
LINC01558Q9Y6Z2 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.27□□□□□ -2.37
LINC01558Q9Y6Z2 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms