| BACE2 | Q9Y5Z0 | LINC01247-201 | ENST00000448901 | 4209 nt | TSL 1 (best) BASIC | 4.15 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | DMD-207 | ENST00000378677 | 13932 nt | APPRIS ALT2 TSL 5 BASIC | 4.15 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | PLSCR5-201 | ENST00000443512 | 1969 nt | APPRIS P1 TSL 1 (best) BASIC | 4.14 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | ETV1-202 | ENST00000399357 | 6096 nt | TSL 2 BASIC | 4.14 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | MIR448-201 | ENST00000362131 | 111 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | Y_RNA.210-201 | ENST00000364161 | 110 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | MIR521-1-201 | ENST00000384902 | 87 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | NPS-201 | ENST00000398023 | 270 nt | APPRIS P1 TSL 5 BASIC | 4.14 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | MORN2-203 | ENST00000409131 | 544 nt | TSL 5 BASIC | 4.14 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AC087650.1-201 | ENST00000431445 | 468 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AC004869.2-201 | ENST00000436501 | 229 nt | TSL 3 BASIC | 4.14 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AL139383.1-203 | ENST00000445227 | 420 nt | TSL 3 BASIC | 4.14 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | U8.21-201 | ENST00000459536 | 136 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | RPL23AP45-201 | ENST00000476406 | 468 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | RN7SL283P-201 | ENST00000489055 | 303 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AC139453.3-201 | ENST00000493276 | 369 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AC005921.1-201 | ENST00000510589 | 286 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | PPBPP1-201 | ENST00000510807 | 373 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | SNORA40.14-201 | ENST00000516543 | 86 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | SCARNA14-201 | ENST00000516903 | 136 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | RNU7-4P-201 | ENST00000516961 | 62 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | SNORA31.19-201 | ENST00000517079 | 126 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | IGKV2-38-201 | ENST00000517443 | 247 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AC025272.1-201 | ENST00000569661 | 483 nt | TSL 2 BASIC | 4.14 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | MTND6P33-201 | ENST00000571794 | 183 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AC002558.3-201 | ENST00000574021 | 401 nt | TSL 3 BASIC | 4.14 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AC092070.3-201 | ENST00000596041 | 337 nt | TSL 3 BASIC | 4.14 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AC004852.3-201 | ENST00000614131 | 326 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | HMGB1P24-202 | ENST00000615653 | 685 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AL161782.1-201 | ENST00000622930 | 586 nt | TSL 3 BASIC | 4.14 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | DOCK7-201 | ENST00000251157 | 7084 nt | APPRIS ALT2 TSL 5 BASIC | 4.14 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | CDH8-205 | ENST00000577730 | 8009 nt | TSL 5 BASIC | 4.14 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | BCLAF1-214 | ENST00000531224 | 7263 nt | APPRIS P3 TSL 1 (best) BASIC | 4.14 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AL589745.1-201 | ENST00000421190 | 3336 nt | TSL 5 BASIC | 4.14 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | UGT2A3-201 | ENST00000251566 | 2965 nt | APPRIS P1 TSL 1 (best) BASIC | 4.14 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | DNAH6-201 | ENST00000237449 | 12666 nt | APPRIS P1 TSL 5 BASIC | 4.14 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | SPAG17-201 | ENST00000336338 | 6924 nt | APPRIS P2 TSL 1 (best) BASIC | 4.14 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | METTL18-201 | ENST00000303469 | 1426 nt | APPRIS P1 TSL 1 (best) BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | C8orf34-203 | ENST00000348340 | 3571 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | NR5A2-201 | ENST00000236914 | 3115 nt | TSL 1 (best) BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | THOC2-202 | ENST00000355725 | 4930 nt | APPRIS P1 TSL 5 BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | PPP1R12A-204 | ENST00000546369 | 2977 nt | TSL 2 BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | LRMP-201 | ENST00000354454 | 2504 nt | APPRIS P2 TSL 1 (best) BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AC007685.1-201 | ENST00000329806 | 452 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | SNORA63.7-201 | ENST00000365579 | 123 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AKAP14-204 | ENST00000371431 | 977 nt | APPRIS P3 TSL 1 (best) BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | Y_RNA.476-201 | ENST00000384347 | 108 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | MIR607-201 | ENST00000385241 | 96 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | MIR199A2-201 | ENST00000385289 | 110 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | MIR1252-201 | ENST00000408861 | 65 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AL117339.3-201 | ENST00000418733 | 162 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AC093151.3-203 | ENST00000422305 | 514 nt | TSL 3 BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AC007560.1-201 | ENST00000426912 | 237 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AL591419.1-201 | ENST00000427423 | 339 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AC007271.1-201 | ENST00000428188 | 382 nt | TSL 3 BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | GYPB-201 | ENST00000429670 | 239 nt | TSL 1 (best) BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | HLA-N-201 | ENST00000437516 | 135 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | IGKV3D-7-201 | ENST00000443397 | 384 nt | APPRIS P1 BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AL133162.1-201 | ENST00000463228 | 453 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AC114741.1-201 | ENST00000504357 | 464 nt | TSL 2 BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | LINC01337-201 | ENST00000515871 | 440 nt | TSL 3 BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | RNU1-95P-201 | ENST00000516357 | 160 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | RNU1-128P-201 | ENST00000516704 | 160 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | Y_RNA.715-201 | ENST00000517082 | 110 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | RNA5SP165-201 | ENST00000517142 | 115 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AC022039.1-201 | ENST00000527110 | 488 nt | TSL 2 BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AC040926.1-201 | ENST00000530195 | 238 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | CACNA1C-IT2-201 | ENST00000541871 | 589 nt | TSL 2 BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AC004584.2-201 | ENST00000570407 | 410 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AC091043.1-201 | ENST00000579830 | 453 nt | TSL 3 BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AC008121.1-201 | ENST00000603244 | 268 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AL645944.1-201 | ENST00000603857 | 493 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | HMGB1P50-201 | ENST00000605814 | 607 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AL161629.2-201 | ENST00000615347 | 275 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | U2.1-201 | ENST00000618978 | 145 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | SMIM2-AS1-204 | ENST00000619472 | 746 nt | TSL 3 BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | LINC01232-201 | ENST00000625254 | 836 nt | TSL 5 BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | ETV1-203 | ENST00000403527 | 3363 nt | TSL 1 (best) BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | CNGA1-203 | ENST00000420489 | 2746 nt | APPRIS P3 TSL 2 BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | MCF2-203 | ENST00000370576 | 3688 nt | APPRIS P3 TSL 1 (best) BASIC | 4.13 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | MTND5P27-201 | ENST00000428871 | 1720 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AGTR1-206 | ENST00000474935 | 1795 nt | APPRIS P1 TSL 3 BASIC | 4.12 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | ADGRL2-211 | ENST00000370730 | 6173 nt | TSL 5 BASIC | 4.12 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | PHEX-201 | ENST00000379374 | 6172 nt | APPRIS P1 TSL 1 (best) BASIC | 4.12 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | MIR625-201 | ENST00000385047 | 85 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | SNORA40C-201 | ENST00000391285 | 128 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | RNA5SP44-201 | ENST00000410446 | 133 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | U51244.1-201 | ENST00000423120 | 374 nt | TSL 3 BASIC | 4.12 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AL451129.1-201 | ENST00000437471 | 285 nt | TSL 3 BASIC | 4.12 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | HMGB1P37-201 | ENST00000439613 | 609 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | RPL21P2-201 | ENST00000440049 | 481 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AC098851.1-201 | ENST00000476561 | 570 nt | TSL 4 BASIC | 4.12 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | RPL22P13-201 | ENST00000493291 | 347 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | RNA5SP164-201 | ENST00000516533 | 110 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | RNU6-572P-201 | ENST00000516724 | 80 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AC026403.1-201 | ENST00000518938 | 295 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | CLEC7A-212 | ENST00000533022 | 625 nt | TSL 1 (best) BASIC | 4.12 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AP004242.1-201 | ENST00000533701 | 349 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | AC103996.1-201 | ENST00000555468 | 102 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| BACE2 | Q9Y5Z0 | TRAV28-201 | ENST00000557548 | 323 nt | BASIC | 4.12 | □□□□□ -1.75 | | |