Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 AC092047.1-201ENST00000424997 240 ntBASIC4.65□□□□□ -1.67
HRH3Q9Y5N1 AC078809.1-201ENST00000427601 140 ntBASIC4.65□□□□□ -1.67
HRH3Q9Y5N1 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.65□□□□□ -1.67
HRH3Q9Y5N1 RPS29P33-201ENST00000456717 146 ntBASIC4.65□□□□□ -1.67
HRH3Q9Y5N1 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.65□□□□□ -1.67
HRH3Q9Y5N1 RN7SL860P-201ENST00000473738 223 ntBASIC4.65□□□□□ -1.67
HRH3Q9Y5N1 NIP7P2-201ENST00000485801 544 ntBASIC4.65□□□□□ -1.67
HRH3Q9Y5N1 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.65□□□□□ -1.67
HRH3Q9Y5N1 Y_RNA.797-201ENST00000515977 94 ntBASIC4.65□□□□□ -1.67
HRH3Q9Y5N1 CR383656.8-201ENST00000549046 145 ntBASIC4.65□□□□□ -1.67
HRH3Q9Y5N1 AC040958.1-201ENST00000561102 201 ntBASIC4.65□□□□□ -1.67
HRH3Q9Y5N1 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.65□□□□□ -1.67
HRH3Q9Y5N1 MIR3145-201ENST00000580727 82 ntBASIC4.65□□□□□ -1.67
HRH3Q9Y5N1 AL357075.2-201ENST00000614906 189 ntBASIC4.65□□□□□ -1.67
HRH3Q9Y5N1 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HRH3Q9Y5N1 MTND5P35-201ENST00000557537 1720 ntBASIC4.65□□□□□ -1.67
HRH3Q9Y5N1 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.65□□□□□ -1.67
HRH3Q9Y5N1 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.65□□□□□ -1.67
HRH3Q9Y5N1 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
HRH3Q9Y5N1 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
HRH3Q9Y5N1 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.65□□□□□ -1.67
HRH3Q9Y5N1 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
HRH3Q9Y5N1 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HRH3Q9Y5N1 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.64□□□□□ -1.67
HRH3Q9Y5N1 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HRH3Q9Y5N1 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.64□□□□□ -1.67
HRH3Q9Y5N1 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HRH3Q9Y5N1 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
HRH3Q9Y5N1 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HRH3Q9Y5N1 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.64□□□□□ -1.67
HRH3Q9Y5N1 RNA5SP205-201ENST00000364653 136 ntBASIC4.64□□□□□ -1.67
HRH3Q9Y5N1 Y_RNA.353-201ENST00000365440 108 ntBASIC4.64□□□□□ -1.67
HRH3Q9Y5N1 Z98749.2-208ENST00000381646 500 ntBASIC4.64□□□□□ -1.67
HRH3Q9Y5N1 MIR487A-201ENST00000385009 80 ntBASIC4.64□□□□□ -1.67
HRH3Q9Y5N1 RNU6-239P-201ENST00000390990 99 ntBASIC4.64□□□□□ -1.67
HRH3Q9Y5N1 SNORA77-201ENST00000408716 125 ntBASIC4.64□□□□□ -1.67
HRH3Q9Y5N1 RNU6-257P-201ENST00000410238 98 ntBASIC4.64□□□□□ -1.67
HRH3Q9Y5N1 RN7SKP61-201ENST00000410642 295 ntBASIC4.64□□□□□ -1.67
HRH3Q9Y5N1 COX5BP7-201ENST00000414780 274 ntBASIC4.64□□□□□ -1.67
HRH3Q9Y5N1 FTH1P6-201ENST00000430768 320 ntBASIC4.64□□□□□ -1.67
HRH3Q9Y5N1 IFNA11P-201ENST00000446352 526 ntBASIC4.64□□□□□ -1.67
HRH3Q9Y5N1 AC125238.1-201ENST00000448842 249 ntBASIC4.64□□□□□ -1.67
HRH3Q9Y5N1 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.64□□□□□ -1.67
HRH3Q9Y5N1 HMGB1P22-201ENST00000505315 124 ntBASIC4.64□□□□□ -1.67
HRH3Q9Y5N1 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.64□□□□□ -1.67
HRH3Q9Y5N1 RNA5SP43-201ENST00000516559 110 ntBASIC4.64□□□□□ -1.67
HRH3Q9Y5N1 SUMO2P18-201ENST00000518873 252 ntBASIC4.64□□□□□ -1.67
HRH3Q9Y5N1 BNIP3P1-201ENST00000547295 580 ntBASIC4.64□□□□□ -1.67
HRH3Q9Y5N1 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.64□□□□□ -1.67
HRH3Q9Y5N1 AC009127.3-201ENST00000570531 403 ntBASIC4.64□□□□□ -1.67
HRH3Q9Y5N1 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.64□□□□□ -1.67
HRH3Q9Y5N1 AC004467.1-201ENST00000615678 330 ntBASIC4.64□□□□□ -1.67
HRH3Q9Y5N1 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
HRH3Q9Y5N1 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
HRH3Q9Y5N1 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HRH3Q9Y5N1 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.64□□□□□ -1.67
HRH3Q9Y5N1 SCARNA15-201ENST00000607520 4325 ntBASIC4.64□□□□□ -1.67
HRH3Q9Y5N1 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HRH3Q9Y5N1 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.64□□□□□ -1.67
HRH3Q9Y5N1 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.63□□□□□ -1.67
HRH3Q9Y5N1 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HRH3Q9Y5N1 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
HRH3Q9Y5N1 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
HRH3Q9Y5N1 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HRH3Q9Y5N1 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.63□□□□□ -1.67
HRH3Q9Y5N1 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.63□□□□□ -1.67
HRH3Q9Y5N1 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
HRH3Q9Y5N1 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HRH3Q9Y5N1 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HRH3Q9Y5N1 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.63□□□□□ -1.67
HRH3Q9Y5N1 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
HRH3Q9Y5N1 SNORA48.4-201ENST00000391089 134 ntBASIC4.63□□□□□ -1.67
HRH3Q9Y5N1 MIR320B2-201ENST00000408479 138 ntBASIC4.63□□□□□ -1.67
HRH3Q9Y5N1 RPL7AP25-201ENST00000423357 805 ntBASIC4.63□□□□□ -1.67
HRH3Q9Y5N1 RPS15AP5-201ENST00000436276 388 ntBASIC4.63□□□□□ -1.67
HRH3Q9Y5N1 CR769767.1-201ENST00000436337 346 ntBASIC4.63□□□□□ -1.67
HRH3Q9Y5N1 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.63□□□□□ -1.67
HRH3Q9Y5N1 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC4.63□□□□□ -1.67
HRH3Q9Y5N1 RPS29P22-201ENST00000472363 168 ntBASIC4.63□□□□□ -1.67
HRH3Q9Y5N1 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.63□□□□□ -1.67
HRH3Q9Y5N1 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.63□□□□□ -1.67
HRH3Q9Y5N1 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.63□□□□□ -1.67
HRH3Q9Y5N1 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.63□□□□□ -1.67
HRH3Q9Y5N1 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.63□□□□□ -1.67
HRH3Q9Y5N1 AL359198.2-201ENST00000611836 194 ntBASIC4.63□□□□□ -1.67
HRH3Q9Y5N1 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HRH3Q9Y5N1 AC092628.2-201ENST00000622492 339 ntBASIC4.63□□□□□ -1.67
HRH3Q9Y5N1 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC4.63□□□□□ -1.67
HRH3Q9Y5N1 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.63□□□□□ -1.67
HRH3Q9Y5N1 AC010332.2-201ENST00000613083 1904 ntBASIC4.63□□□□□ -1.67
HRH3Q9Y5N1 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.63□□□□□ -1.67
HRH3Q9Y5N1 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.63□□□□□ -1.67
HRH3Q9Y5N1 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HRH3Q9Y5N1 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HRH3Q9Y5N1 SRP72P2-201ENST00000344851 1979 ntBASIC4.62□□□□□ -1.67
HRH3Q9Y5N1 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.62□□□□□ -1.67
HRH3Q9Y5N1 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.62□□□□□ -1.67
HRH3Q9Y5N1 RNA5SP428-201ENST00000365129 132 ntBASIC4.62□□□□□ -1.67
HRH3Q9Y5N1 SNORA2.3-201ENST00000383920 135 ntBASIC4.62□□□□□ -1.67
HRH3Q9Y5N1 MIR325-201ENST00000385260 98 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms