Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.52□□□□□ -1.53
PCDHGA4Q9Y5G9 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDHGA4Q9Y5G9 AL133481.2-203ENST00000607558 139 ntBASIC5.52□□□□□ -1.53
PCDHGA4Q9Y5G9 AC015914.2-201ENST00000618167 288 ntBASIC5.52□□□□□ -1.53
PCDHGA4Q9Y5G9 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
PCDHGA4Q9Y5G9 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHGA4Q9Y5G9 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHGA4Q9Y5G9 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHGA4Q9Y5G9 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHGA4Q9Y5G9 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDHGA4Q9Y5G9 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
PCDHGA4Q9Y5G9 RNU1-100P-201ENST00000365255 165 ntBASIC5.51□□□□□ -1.53
PCDHGA4Q9Y5G9 U1.1-201ENST00000384101 164 ntBASIC5.51□□□□□ -1.53
PCDHGA4Q9Y5G9 AC019205.3-201ENST00000424573 156 ntBASIC5.51□□□□□ -1.53
PCDHGA4Q9Y5G9 RPS4XP2-201ENST00000458402 793 ntBASIC5.51□□□□□ -1.53
PCDHGA4Q9Y5G9 RN7SL826P-201ENST00000479724 288 ntBASIC5.51□□□□□ -1.53
PCDHGA4Q9Y5G9 RNU6-197P-201ENST00000516680 100 ntBASIC5.51□□□□□ -1.53
PCDHGA4Q9Y5G9 SNORA31.23-201ENST00000517219 133 ntBASIC5.51□□□□□ -1.53
PCDHGA4Q9Y5G9 CKS1BP7-201ENST00000522230 235 ntBASIC5.51□□□□□ -1.53
PCDHGA4Q9Y5G9 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDHGA4Q9Y5G9 AC126615.2-201ENST00000553003 515 ntBASIC5.51□□□□□ -1.53
PCDHGA4Q9Y5G9 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDHGA4Q9Y5G9 AC096996.1-201ENST00000563813 325 ntBASIC5.51□□□□□ -1.53
PCDHGA4Q9Y5G9 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDHGA4Q9Y5G9 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHGA4Q9Y5G9 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHGA4Q9Y5G9 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDHGA4Q9Y5G9 AC118273.1-201ENST00000525324 3006 ntBASIC5.51□□□□□ -1.53
PCDHGA4Q9Y5G9 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHGA4Q9Y5G9 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHGA4Q9Y5G9 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHGA4Q9Y5G9 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHGA4Q9Y5G9 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHGA4Q9Y5G9 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHGA4Q9Y5G9 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHGA4Q9Y5G9 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.5□□□□□ -1.53
PCDHGA4Q9Y5G9 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHGA4Q9Y5G9 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHGA4Q9Y5G9 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHGA4Q9Y5G9 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHGA4Q9Y5G9 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDHGA4Q9Y5G9 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.5□□□□□ -1.53
PCDHGA4Q9Y5G9 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHGA4Q9Y5G9 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHGA4Q9Y5G9 AL159987.1-201ENST00000347911 293 ntBASIC5.5□□□□□ -1.53
PCDHGA4Q9Y5G9 Y_RNA.85-201ENST00000363014 111 ntBASIC5.5□□□□□ -1.53
PCDHGA4Q9Y5G9 RNU6-820P-201ENST00000384273 107 ntBASIC5.5□□□□□ -1.53
PCDHGA4Q9Y5G9 SNORA51.10-201ENST00000384418 136 ntBASIC5.5□□□□□ -1.53
PCDHGA4Q9Y5G9 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
PCDHGA4Q9Y5G9 RNA5SP91-201ENST00000390902 119 ntBASIC5.5□□□□□ -1.53
PCDHGA4Q9Y5G9 SNORA68.2-201ENST00000391263 128 ntBASIC5.5□□□□□ -1.53
PCDHGA4Q9Y5G9 AL590762.2-201ENST00000395798 571 ntBASIC5.5□□□□□ -1.53
PCDHGA4Q9Y5G9 AL691449.1-201ENST00000426570 421 ntBASIC5.5□□□□□ -1.53
PCDHGA4Q9Y5G9 RPL39P40-201ENST00000445481 146 ntBASIC5.5□□□□□ -1.53
PCDHGA4Q9Y5G9 RPL12P39-201ENST00000455456 496 ntBASIC5.5□□□□□ -1.53
PCDHGA4Q9Y5G9 RPSAP50-201ENST00000481955 852 ntBASIC5.5□□□□□ -1.53
PCDHGA4Q9Y5G9 RN7SL570P-201ENST00000484405 292 ntBASIC5.5□□□□□ -1.53
PCDHGA4Q9Y5G9 RN7SL30P-201ENST00000488416 306 ntBASIC5.5□□□□□ -1.53
PCDHGA4Q9Y5G9 RNA5SP154-201ENST00000516193 111 ntBASIC5.5□□□□□ -1.53
PCDHGA4Q9Y5G9 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC5.5□□□□□ -1.53
PCDHGA4Q9Y5G9 PRELID2P1-201ENST00000552837 301 ntBASIC5.5□□□□□ -1.53
PCDHGA4Q9Y5G9 MED28P6-201ENST00000558776 231 ntBASIC5.5□□□□□ -1.53
PCDHGA4Q9Y5G9 CYP4A27P-201ENST00000567218 190 ntBASIC5.5□□□□□ -1.53
PCDHGA4Q9Y5G9 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.5□□□□□ -1.53
PCDHGA4Q9Y5G9 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHGA4Q9Y5G9 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHGA4Q9Y5G9 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDHGA4Q9Y5G9 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.5□□□□□ -1.53
PCDHGA4Q9Y5G9 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHGA4Q9Y5G9 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHGA4Q9Y5G9 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHGA4Q9Y5G9 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHGA4Q9Y5G9 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PCDHGA4Q9Y5G9 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.49□□□□□ -1.53
PCDHGA4Q9Y5G9 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA4Q9Y5G9 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDHGA4Q9Y5G9 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDHGA4Q9Y5G9 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA4Q9Y5G9 AC092681.1-201ENST00000297369 291 ntBASIC5.49□□□□□ -1.53
PCDHGA4Q9Y5G9 MIR130A-201ENST00000385274 89 ntBASIC5.49□□□□□ -1.53
PCDHGA4Q9Y5G9 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PCDHGA4Q9Y5G9 RPL11P3-201ENST00000395256 523 ntBASIC5.49□□□□□ -1.53
PCDHGA4Q9Y5G9 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDHGA4Q9Y5G9 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDHGA4Q9Y5G9 AC125238.1-201ENST00000448842 249 ntBASIC5.49□□□□□ -1.53
PCDHGA4Q9Y5G9 RN7SL547P-201ENST00000490793 290 ntBASIC5.49□□□□□ -1.53
PCDHGA4Q9Y5G9 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.49□□□□□ -1.53
PCDHGA4Q9Y5G9 RNU1-103P-201ENST00000516502 125 ntBASIC5.49□□□□□ -1.53
PCDHGA4Q9Y5G9 SNORA31.16-201ENST00000516773 139 ntBASIC5.49□□□□□ -1.53
PCDHGA4Q9Y5G9 AC021678.3-201ENST00000517893 476 ntBASIC5.49□□□□□ -1.53
PCDHGA4Q9Y5G9 UBE2Q2P6-201ENST00000612666 153 ntBASIC5.49□□□□□ -1.53
PCDHGA4Q9Y5G9 AL442128.1-201ENST00000615151 90 ntBASIC5.49□□□□□ -1.53
PCDHGA4Q9Y5G9 AC009831.4-201ENST00000620744 325 ntBASIC5.49□□□□□ -1.53
PCDHGA4Q9Y5G9 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDHGA4Q9Y5G9 AC005332.5-201ENST00000591222 2919 ntBASIC5.49□□□□□ -1.53
PCDHGA4Q9Y5G9 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
PCDHGA4Q9Y5G9 AL031595.2-201ENST00000624215 19071 ntBASIC5.49□□□□□ -1.53
PCDHGA4Q9Y5G9 AC107027.3-201ENST00000565095 3473 ntBASIC5.49□□□□□ -1.53
PCDHGA4Q9Y5G9 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
PCDHGA4Q9Y5G9 AC005005.4-201ENST00000623789 16698 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms