Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 AL360181.4-201ENST00000621752 134 ntBASIC4.8□□□□□ -1.64
LEMD3Q9Y2U8 AL450472.1-202ENST00000637286 180 ntBASIC4.8□□□□□ -1.64
LEMD3Q9Y2U8 SDAD1P2-201ENST00000441308 2028 ntBASIC4.8□□□□□ -1.64
LEMD3Q9Y2U8 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
LEMD3Q9Y2U8 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LEMD3Q9Y2U8 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.8□□□□□ -1.64
LEMD3Q9Y2U8 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LEMD3Q9Y2U8 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.8□□□□□ -1.64
LEMD3Q9Y2U8 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LEMD3Q9Y2U8 AC009812.4-201ENST00000569134 1805 ntBASIC4.79□□□□□ -1.64
LEMD3Q9Y2U8 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LEMD3Q9Y2U8 MIR208A-201ENST00000362287 71 ntBASIC4.79□□□□□ -1.64
LEMD3Q9Y2U8 RNY1P16-201ENST00000363063 111 ntBASIC4.79□□□□□ -1.64
LEMD3Q9Y2U8 Y_RNA.471-201ENST00000384312 102 ntBASIC4.79□□□□□ -1.64
LEMD3Q9Y2U8 Y_RNA.526-201ENST00000384572 110 ntBASIC4.79□□□□□ -1.64
LEMD3Q9Y2U8 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LEMD3Q9Y2U8 LAP3P1-201ENST00000403648 294 ntBASIC4.79□□□□□ -1.64
LEMD3Q9Y2U8 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.79□□□□□ -1.64
LEMD3Q9Y2U8 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.79□□□□□ -1.64
LEMD3Q9Y2U8 CYCSP43-201ENST00000438233 310 ntBASIC4.79□□□□□ -1.64
LEMD3Q9Y2U8 snoU13.24-201ENST00000458998 104 ntBASIC4.79□□□□□ -1.64
LEMD3Q9Y2U8 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.79□□□□□ -1.64
LEMD3Q9Y2U8 RN7SL585P-201ENST00000470538 280 ntBASIC4.79□□□□□ -1.64
LEMD3Q9Y2U8 AC010285.1-201ENST00000470580 392 ntBASIC4.79□□□□□ -1.64
LEMD3Q9Y2U8 AC018437.1-201ENST00000492214 406 ntBASIC4.79□□□□□ -1.64
LEMD3Q9Y2U8 AC023141.12-201ENST00000512399 199 ntBASIC4.79□□□□□ -1.64
LEMD3Q9Y2U8 RNU4-71P-201ENST00000516258 113 ntBASIC4.79□□□□□ -1.64
LEMD3Q9Y2U8 RNU6-840P-201ENST00000517275 65 ntBASIC4.79□□□□□ -1.64
LEMD3Q9Y2U8 AC104576.1-201ENST00000524225 88 ntBASIC4.79□□□□□ -1.64
LEMD3Q9Y2U8 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LEMD3Q9Y2U8 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.79□□□□□ -1.64
LEMD3Q9Y2U8 AL390123.1-201ENST00000603216 237 ntBASIC4.79□□□□□ -1.64
LEMD3Q9Y2U8 MIR1244-1-201ENST00000612829 85 ntBASIC4.79□□□□□ -1.64
LEMD3Q9Y2U8 MIR1244-3-201ENST00000635744 85 ntBASIC4.79□□□□□ -1.64
LEMD3Q9Y2U8 MIR1244-2-201ENST00000636449 85 ntBASIC4.79□□□□□ -1.64
LEMD3Q9Y2U8 MIR1244-4-202ENST00000636813 85 ntBASIC4.79□□□□□ -1.64
LEMD3Q9Y2U8 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LEMD3Q9Y2U8 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.79□□□□□ -1.64
LEMD3Q9Y2U8 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LEMD3Q9Y2U8 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.79□□□□□ -1.64
LEMD3Q9Y2U8 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LEMD3Q9Y2U8 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
LEMD3Q9Y2U8 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LEMD3Q9Y2U8 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.78□□□□□ -1.64
LEMD3Q9Y2U8 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
LEMD3Q9Y2U8 MIR335-201ENST00000362173 94 ntBASIC4.78□□□□□ -1.64
LEMD3Q9Y2U8 Y_RNA.183-201ENST00000363882 113 ntBASIC4.78□□□□□ -1.64
LEMD3Q9Y2U8 Y_RNA.200-201ENST00000364018 102 ntBASIC4.78□□□□□ -1.64
LEMD3Q9Y2U8 Y_RNA.277-201ENST00000364754 102 ntBASIC4.78□□□□□ -1.64
LEMD3Q9Y2U8 RNU6-596P-201ENST00000365395 98 ntBASIC4.78□□□□□ -1.64
LEMD3Q9Y2U8 RNU6-1329P-201ENST00000365664 107 ntBASIC4.78□□□□□ -1.64
LEMD3Q9Y2U8 RNU6-701P-201ENST00000384059 107 ntBASIC4.78□□□□□ -1.64
LEMD3Q9Y2U8 SNORA5A-201ENST00000384111 134 ntBASIC4.78□□□□□ -1.64
LEMD3Q9Y2U8 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
LEMD3Q9Y2U8 RPL21P17-201ENST00000397467 475 ntBASIC4.78□□□□□ -1.64
LEMD3Q9Y2U8 AL591419.1-201ENST00000427423 339 ntBASIC4.78□□□□□ -1.64
LEMD3Q9Y2U8 EIF1P2-201ENST00000428233 350 ntBASIC4.78□□□□□ -1.64
LEMD3Q9Y2U8 YME1L1P1-201ENST00000429435 297 ntBASIC4.78□□□□□ -1.64
LEMD3Q9Y2U8 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.78□□□□□ -1.64
LEMD3Q9Y2U8 USP9YP7-201ENST00000436723 430 ntBASIC4.78□□□□□ -1.64
LEMD3Q9Y2U8 RPEP5-201ENST00000441137 268 ntBASIC4.78□□□□□ -1.64
LEMD3Q9Y2U8 NEFMP1-201ENST00000443423 1006 ntBASIC4.78□□□□□ -1.64
LEMD3Q9Y2U8 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LEMD3Q9Y2U8 USP9YP32-201ENST00000452432 430 ntBASIC4.78□□□□□ -1.64
LEMD3Q9Y2U8 AL645939.1-201ENST00000453429 797 ntBASIC4.78□□□□□ -1.64
LEMD3Q9Y2U8 AL133162.1-201ENST00000463228 453 ntBASIC4.78□□□□□ -1.64
LEMD3Q9Y2U8 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LEMD3Q9Y2U8 HMGB1P22-201ENST00000505315 124 ntBASIC4.78□□□□□ -1.64
LEMD3Q9Y2U8 RNU6-390P-201ENST00000516259 103 ntBASIC4.78□□□□□ -1.64
LEMD3Q9Y2U8 RNU7-4P-201ENST00000516961 62 ntBASIC4.78□□□□□ -1.64
LEMD3Q9Y2U8 AC069240.1-201ENST00000548774 375 ntBASIC4.78□□□□□ -1.64
LEMD3Q9Y2U8 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.78□□□□□ -1.64
LEMD3Q9Y2U8 FAM60BP-201ENST00000578364 658 ntBASIC4.78□□□□□ -1.64
LEMD3Q9Y2U8 AC012119.1-201ENST00000603184 222 ntBASIC4.78□□□□□ -1.64
LEMD3Q9Y2U8 AC174048.1-201ENST00000603389 144 ntBASIC4.78□□□□□ -1.64
LEMD3Q9Y2U8 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.78□□□□□ -1.64
LEMD3Q9Y2U8 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LEMD3Q9Y2U8 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
LEMD3Q9Y2U8 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
LEMD3Q9Y2U8 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
LEMD3Q9Y2U8 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.78□□□□□ -1.64
LEMD3Q9Y2U8 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LEMD3Q9Y2U8 AC116096.1-201ENST00000566804 2314 ntBASIC4.77□□□□□ -1.65
LEMD3Q9Y2U8 AL391987.6-201ENST00000305671 199 ntBASIC4.77□□□□□ -1.65
LEMD3Q9Y2U8 MIR448-201ENST00000362131 111 ntBASIC4.77□□□□□ -1.65
LEMD3Q9Y2U8 Y_RNA.54-201ENST00000362766 105 ntBASIC4.77□□□□□ -1.65
LEMD3Q9Y2U8 RNU6-48P-201ENST00000384161 107 ntBASIC4.77□□□□□ -1.65
LEMD3Q9Y2U8 RNU6-708P-201ENST00000384217 107 ntBASIC4.77□□□□□ -1.65
LEMD3Q9Y2U8 MIR7-3-201ENST00000384898 110 ntBASIC4.77□□□□□ -1.65
LEMD3Q9Y2U8 MIR93-201ENST00000385024 80 ntBASIC4.77□□□□□ -1.65
LEMD3Q9Y2U8 AC092809.3-201ENST00000415453 231 ntBASIC4.77□□□□□ -1.65
LEMD3Q9Y2U8 CRYBB2P1-203ENST00000415709 538 ntBASIC4.77□□□□□ -1.65
LEMD3Q9Y2U8 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.77□□□□□ -1.65
LEMD3Q9Y2U8 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.77□□□□□ -1.65
LEMD3Q9Y2U8 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.77□□□□□ -1.65
LEMD3Q9Y2U8 AC078817.1-201ENST00000492623 435 ntBASIC4.77□□□□□ -1.65
LEMD3Q9Y2U8 UBE2CP3-201ENST00000502715 450 ntBASIC4.77□□□□□ -1.65
LEMD3Q9Y2U8 Y_RNA.683-201ENST00000516508 93 ntBASIC4.77□□□□□ -1.65
LEMD3Q9Y2U8 Y_RNA.689-201ENST00000516589 107 ntBASIC4.77□□□□□ -1.65
LEMD3Q9Y2U8 SNORA31.22-201ENST00000517204 135 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms