Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 RNU6-7-201ENST00000364784 107 ntBASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 RNU6-8-201ENST00000365467 107 ntBASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 RNU6-25P-201ENST00000383873 107 ntBASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 RNU6-1-201ENST00000383898 107 ntBASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 RNU6-32P-201ENST00000383948 107 ntBASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 RNU6-4P-201ENST00000384205 107 ntBASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 RNU6-5P-201ENST00000384238 107 ntBASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 RNU6-17P-201ENST00000384245 107 ntBASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 RNU6-13P-201ENST00000384248 107 ntBASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 RNU6-3P-201ENST00000384314 107 ntBASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 RNU6-18P-201ENST00000384527 107 ntBASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 RNU6-146P-201ENST00000384602 108 ntBASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 RNU6-12P-201ENST00000384604 107 ntBASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 RNU6-2-201ENST00000384627 107 ntBASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 RNU6-29P-201ENST00000384637 107 ntBASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 RNU6-41P-201ENST00000384741 107 ntBASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 RNU6-9-201ENST00000384776 107 ntBASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 AL590704.1-201ENST00000402856 794 ntBASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 RPL21P40-201ENST00000428586 483 ntBASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 RPL26P6-201ENST00000440913 438 ntBASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 AC079354.2-201ENST00000453523 154 ntBASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 RNU7-197P-201ENST00000458836 62 ntBASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 AC006511.1-201ENST00000470614 315 ntBASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 RPS26P21-201ENST00000475397 348 ntBASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 AC105137.1-201ENST00000484355 562 ntBASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 AC020593.1-201ENST00000507399 299 ntBASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 RNU7-110P-201ENST00000516891 62 ntBASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 AK6P2-201ENST00000549020 471 ntBASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 AC034105.4-201ENST00000568304 277 ntBASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 RNU6-6P-201ENST00000606623 107 ntBASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDZRN3Q9UPQ7 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDZRN3Q9UPQ7 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDZRN3Q9UPQ7 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.73□□□□□ -1.49
PDZRN3Q9UPQ7 MAPK10-303ENST00000641324 3959 ntBASIC5.73□□□□□ -1.49
PDZRN3Q9UPQ7 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.73□□□□□ -1.49
PDZRN3Q9UPQ7 Y_RNA.172-201ENST00000363765 102 ntBASIC5.73□□□□□ -1.49
PDZRN3Q9UPQ7 RNU6-275P-201ENST00000364910 107 ntBASIC5.73□□□□□ -1.49
PDZRN3Q9UPQ7 RNU6-211P-201ENST00000384047 107 ntBASIC5.73□□□□□ -1.49
PDZRN3Q9UPQ7 RNU6-926P-201ENST00000384075 107 ntBASIC5.73□□□□□ -1.49
PDZRN3Q9UPQ7 RNU5A-5P-201ENST00000411054 116 ntBASIC5.73□□□□□ -1.49
PDZRN3Q9UPQ7 RPL21P90-201ENST00000415692 466 ntBASIC5.73□□□□□ -1.49
PDZRN3Q9UPQ7 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC5.73□□□□□ -1.49
PDZRN3Q9UPQ7 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.73□□□□□ -1.49
PDZRN3Q9UPQ7 MRPS10P1-201ENST00000448483 130 ntBASIC5.73□□□□□ -1.49
PDZRN3Q9UPQ7 AC104073.1-201ENST00000451988 151 ntBASIC5.73□□□□□ -1.49
PDZRN3Q9UPQ7 RPL21P41-201ENST00000459863 264 ntBASIC5.73□□□□□ -1.49
PDZRN3Q9UPQ7 RPS29P24-201ENST00000486345 171 ntBASIC5.73□□□□□ -1.49
PDZRN3Q9UPQ7 MTND3P25-201ENST00000509243 135 ntBASIC5.73□□□□□ -1.49
PDZRN3Q9UPQ7 AC006499.6-201ENST00000511169 607 ntBASIC5.73□□□□□ -1.49
PDZRN3Q9UPQ7 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PDZRN3Q9UPQ7 Y_RNA.677-201ENST00000516401 85 ntBASIC5.73□□□□□ -1.49
PDZRN3Q9UPQ7 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC5.73□□□□□ -1.49
PDZRN3Q9UPQ7 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.73□□□□□ -1.49
PDZRN3Q9UPQ7 AC008749.1-201ENST00000597650 306 ntBASIC5.73□□□□□ -1.49
PDZRN3Q9UPQ7 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC5.73□□□□□ -1.49
PDZRN3Q9UPQ7 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.73□□□□□ -1.49
PDZRN3Q9UPQ7 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.73□□□□□ -1.49
PDZRN3Q9UPQ7 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDZRN3Q9UPQ7 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDZRN3Q9UPQ7 AP000542.2-201ENST00000623199 6179 ntBASIC5.73□□□□□ -1.49
PDZRN3Q9UPQ7 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDZRN3Q9UPQ7 AC116667.1-201ENST00000604855 2072 ntBASIC5.73□□□□□ -1.49
PDZRN3Q9UPQ7 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
PDZRN3Q9UPQ7 AL365440.1-201ENST00000436135 2167 ntBASIC5.72□□□□□ -1.49
PDZRN3Q9UPQ7 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.72□□□□□ -1.49
PDZRN3Q9UPQ7 RN7SKP280-201ENST00000364196 304 ntBASIC5.72□□□□□ -1.49
PDZRN3Q9UPQ7 RNA5SP372-201ENST00000390836 115 ntBASIC5.72□□□□□ -1.49
PDZRN3Q9UPQ7 RNU6-516P-201ENST00000411381 104 ntBASIC5.72□□□□□ -1.49
PDZRN3Q9UPQ7 Z95327.1-201ENST00000446082 482 ntBASIC5.72□□□□□ -1.49
PDZRN3Q9UPQ7 RNU6-1037P-201ENST00000459571 107 ntBASIC5.72□□□□□ -1.49
PDZRN3Q9UPQ7 DEFB108D-201ENST00000527787 222 ntBASIC5.72□□□□□ -1.49
PDZRN3Q9UPQ7 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.72□□□□□ -1.49
PDZRN3Q9UPQ7 AC090049.2-201ENST00000550377 109 ntBASIC5.72□□□□□ -1.49
PDZRN3Q9UPQ7 MIR8076-201ENST00000611401 83 ntBASIC5.72□□□□□ -1.49
PDZRN3Q9UPQ7 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDZRN3Q9UPQ7 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDZRN3Q9UPQ7 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
PDZRN3Q9UPQ7 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
PDZRN3Q9UPQ7 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.71□□□□□ -1.49
PDZRN3Q9UPQ7 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.71□□□□□ -1.5
PDZRN3Q9UPQ7 RNU6-294P-201ENST00000364999 102 ntBASIC5.71□□□□□ -1.5
PDZRN3Q9UPQ7 RNU5E-7P-201ENST00000365290 117 ntBASIC5.71□□□□□ -1.5
PDZRN3Q9UPQ7 RNU1-13P-201ENST00000384499 162 ntBASIC5.71□□□□□ -1.5
PDZRN3Q9UPQ7 PPIAP31-201ENST00000405422 495 ntBASIC5.71□□□□□ -1.5
PDZRN3Q9UPQ7 EZH2P1-201ENST00000431167 291 ntBASIC5.71□□□□□ -1.5
PDZRN3Q9UPQ7 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms