Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 RN7SKP122-201ENST00000515923 296 ntBASIC4.34□□□□□ -1.71
FOXD3Q9UJU5 RNU6-1212P-201ENST00000517023 104 ntBASIC4.34□□□□□ -1.71
FOXD3Q9UJU5 RNU6-58P-201ENST00000517143 103 ntBASIC4.34□□□□□ -1.71
FOXD3Q9UJU5 SNORA31.23-201ENST00000517219 133 ntBASIC4.34□□□□□ -1.71
FOXD3Q9UJU5 AP002392.1-201ENST00000537692 208 ntBASIC4.34□□□□□ -1.71
FOXD3Q9UJU5 MIR5695-201ENST00000579717 85 ntBASIC4.34□□□□□ -1.71
FOXD3Q9UJU5 AC015914.2-201ENST00000618167 288 ntBASIC4.34□□□□□ -1.71
FOXD3Q9UJU5 U2.22-201ENST00000636441 106 ntBASIC4.34□□□□□ -1.71
FOXD3Q9UJU5 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
FOXD3Q9UJU5 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
FOXD3Q9UJU5 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.34□□□□□ -1.71
FOXD3Q9UJU5 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
FOXD3Q9UJU5 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
FOXD3Q9UJU5 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.34□□□□□ -1.72
FOXD3Q9UJU5 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
FOXD3Q9UJU5 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
FOXD3Q9UJU5 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
FOXD3Q9UJU5 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
FOXD3Q9UJU5 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.33□□□□□ -1.72
FOXD3Q9UJU5 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.33□□□□□ -1.72
FOXD3Q9UJU5 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.33□□□□□ -1.72
FOXD3Q9UJU5 RNU6-487P-201ENST00000365430 104 ntBASIC4.33□□□□□ -1.72
FOXD3Q9UJU5 SNORA62-201ENST00000365493 153 ntBASIC4.33□□□□□ -1.72
FOXD3Q9UJU5 RNU6-1145P-201ENST00000384246 107 ntBASIC4.33□□□□□ -1.72
FOXD3Q9UJU5 MIR708-201ENST00000390708 88 ntBASIC4.33□□□□□ -1.72
FOXD3Q9UJU5 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXD3Q9UJU5 RPS26P42-201ENST00000413485 326 ntBASIC4.33□□□□□ -1.72
FOXD3Q9UJU5 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.33□□□□□ -1.72
FOXD3Q9UJU5 TBCAP2-201ENST00000416175 326 ntBASIC4.33□□□□□ -1.72
FOXD3Q9UJU5 WARS2P1-201ENST00000429678 537 ntBASIC4.33□□□□□ -1.72
FOXD3Q9UJU5 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.33□□□□□ -1.72
FOXD3Q9UJU5 HMGN2P10-201ENST00000448085 265 ntBASIC4.33□□□□□ -1.72
FOXD3Q9UJU5 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.33□□□□□ -1.72
FOXD3Q9UJU5 RPL23AP56-201ENST00000460778 453 ntBASIC4.33□□□□□ -1.72
FOXD3Q9UJU5 AL591473.1-201ENST00000464297 313 ntBASIC4.33□□□□□ -1.72
FOXD3Q9UJU5 RNA5SP464-201ENST00000516251 108 ntBASIC4.33□□□□□ -1.72
FOXD3Q9UJU5 RNU7-110P-201ENST00000516891 62 ntBASIC4.33□□□□□ -1.72
FOXD3Q9UJU5 RNA5SP54-201ENST00000516951 92 ntBASIC4.33□□□□□ -1.72
FOXD3Q9UJU5 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.33□□□□□ -1.72
FOXD3Q9UJU5 MIR5096-201ENST00000583713 70 ntBASIC4.33□□□□□ -1.72
FOXD3Q9UJU5 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.33□□□□□ -1.72
FOXD3Q9UJU5 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.33□□□□□ -1.72
FOXD3Q9UJU5 AC012603.1-201ENST00000606424 528 ntBASIC4.33□□□□□ -1.72
FOXD3Q9UJU5 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.33□□□□□ -1.72
FOXD3Q9UJU5 MIR6810-201ENST00000622701 70 ntBASIC4.33□□□□□ -1.72
FOXD3Q9UJU5 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
FOXD3Q9UJU5 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
FOXD3Q9UJU5 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXD3Q9UJU5 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
FOXD3Q9UJU5 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXD3Q9UJU5 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXD3Q9UJU5 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.32□□□□□ -1.72
FOXD3Q9UJU5 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXD3Q9UJU5 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXD3Q9UJU5 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
FOXD3Q9UJU5 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXD3Q9UJU5 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXD3Q9UJU5 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.32□□□□□ -1.72
FOXD3Q9UJU5 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.32□□□□□ -1.72
FOXD3Q9UJU5 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.32□□□□□ -1.72
FOXD3Q9UJU5 SNORA25.1-201ENST00000362326 128 ntBASIC4.32□□□□□ -1.72
FOXD3Q9UJU5 Y_RNA.76-201ENST00000362931 109 ntBASIC4.32□□□□□ -1.72
FOXD3Q9UJU5 RN7SKP280-201ENST00000364196 304 ntBASIC4.32□□□□□ -1.72
FOXD3Q9UJU5 Y_RNA.570-201ENST00000384750 101 ntBASIC4.32□□□□□ -1.72
FOXD3Q9UJU5 MIR329-1-201ENST00000385028 80 ntBASIC4.32□□□□□ -1.72
FOXD3Q9UJU5 RN7SKP106-201ENST00000410832 272 ntBASIC4.32□□□□□ -1.72
FOXD3Q9UJU5 RNU6-1001P-201ENST00000411265 100 ntBASIC4.32□□□□□ -1.72
FOXD3Q9UJU5 CRYBB2P1-203ENST00000415709 538 ntBASIC4.32□□□□□ -1.72
FOXD3Q9UJU5 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.32□□□□□ -1.72
FOXD3Q9UJU5 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.32□□□□□ -1.72
FOXD3Q9UJU5 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.32□□□□□ -1.72
FOXD3Q9UJU5 AC012308.1-201ENST00000451232 178 ntBASIC4.32□□□□□ -1.72
FOXD3Q9UJU5 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.32□□□□□ -1.72
FOXD3Q9UJU5 AC022795.1-201ENST00000473808 480 ntBASIC4.32□□□□□ -1.72
FOXD3Q9UJU5 RPL23AP65-201ENST00000475608 468 ntBASIC4.32□□□□□ -1.72
FOXD3Q9UJU5 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.32□□□□□ -1.72
FOXD3Q9UJU5 RNU6-567P-201ENST00000516746 107 ntBASIC4.32□□□□□ -1.72
FOXD3Q9UJU5 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
FOXD3Q9UJU5 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.32□□□□□ -1.72
FOXD3Q9UJU5 RN7SL690P-201ENST00000582087 240 ntBASIC4.32□□□□□ -1.72
FOXD3Q9UJU5 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.32□□□□□ -1.72
FOXD3Q9UJU5 MIR378J-201ENST00000611988 109 ntBASIC4.32□□□□□ -1.72
FOXD3Q9UJU5 AL110115.1-201ENST00000614396 364 ntBASIC4.32□□□□□ -1.72
FOXD3Q9UJU5 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
FOXD3Q9UJU5 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
FOXD3Q9UJU5 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.32□□□□□ -1.72
FOXD3Q9UJU5 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.32□□□□□ -1.72
FOXD3Q9UJU5 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
FOXD3Q9UJU5 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
FOXD3Q9UJU5 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
FOXD3Q9UJU5 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
FOXD3Q9UJU5 MFSD8-216ENST00000641147 4009 ntBASIC4.31□□□□□ -1.72
FOXD3Q9UJU5 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
FOXD3Q9UJU5 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
FOXD3Q9UJU5 Y_RNA.286-201ENST00000364813 102 ntBASIC4.31□□□□□ -1.72
FOXD3Q9UJU5 RNU6-514P-201ENST00000384208 107 ntBASIC4.31□□□□□ -1.72
FOXD3Q9UJU5 U3.19-201ENST00000390893 196 ntBASIC4.31□□□□□ -1.72
FOXD3Q9UJU5 SNORA26.3-201ENST00000391119 136 ntBASIC4.31□□□□□ -1.72
FOXD3Q9UJU5 RNA5SP390-201ENST00000410191 113 ntBASIC4.31□□□□□ -1.72
FOXD3Q9UJU5 RNU4-30P-201ENST00000410245 143 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms