Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 MTND4P17-201ENST00000470444 350 ntBASIC3.89□□□□□ -1.79
USP25Q9UHP3 RPL21P93-201ENST00000480465 489 ntBASIC3.89□□□□□ -1.79
USP25Q9UHP3 RBBP4P6-201ENST00000508098 202 ntBASIC3.89□□□□□ -1.79
USP25Q9UHP3 AC090136.1-201ENST00000520009 240 ntBASIC3.89□□□□□ -1.79
USP25Q9UHP3 AP000867.2-201ENST00000532468 320 ntBASIC3.89□□□□□ -1.79
USP25Q9UHP3 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
USP25Q9UHP3 AC022893.3-201ENST00000607665 437 ntBASIC3.89□□□□□ -1.79
USP25Q9UHP3 Z82243.1-201ENST00000609432 473 ntBASIC3.89□□□□□ -1.79
USP25Q9UHP3 FTX_3.1-201ENST00000610451 147 ntBASIC3.89□□□□□ -1.79
USP25Q9UHP3 AC073308.1-201ENST00000623696 305 ntBASIC3.89□□□□□ -1.79
USP25Q9UHP3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.89□□□□□ -1.79
USP25Q9UHP3 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
USP25Q9UHP3 MTND5P27-201ENST00000428871 1720 ntBASIC3.89□□□□□ -1.79
USP25Q9UHP3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
USP25Q9UHP3 AL359693.1-201ENST00000614959 2407 ntBASIC3.89□□□□□ -1.79
USP25Q9UHP3 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
USP25Q9UHP3 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
USP25Q9UHP3 Y_RNA.162-201ENST00000363683 102 ntBASIC3.88□□□□□ -1.79
USP25Q9UHP3 RNU6-270P-201ENST00000364131 105 ntBASIC3.88□□□□□ -1.79
USP25Q9UHP3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.88□□□□□ -1.79
USP25Q9UHP3 RNU6-1297P-201ENST00000384415 104 ntBASIC3.88□□□□□ -1.79
USP25Q9UHP3 AL356968.1-201ENST00000416622 474 ntBASIC3.88□□□□□ -1.79
USP25Q9UHP3 DBIP2-201ENST00000419076 262 ntBASIC3.88□□□□□ -1.79
USP25Q9UHP3 AL353729.1-201ENST00000425044 720 ntBASIC3.88□□□□□ -1.79
USP25Q9UHP3 AC006946.1-201ENST00000429106 328 ntBASIC3.88□□□□□ -1.79
USP25Q9UHP3 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.88□□□□□ -1.79
USP25Q9UHP3 RPS3AP52-201ENST00000435639 297 ntBASIC3.88□□□□□ -1.79
USP25Q9UHP3 SNRPEP9-201ENST00000436794 238 ntBASIC3.88□□□□□ -1.79
USP25Q9UHP3 GTF2IP13-201ENST00000438487 386 ntBASIC3.88□□□□□ -1.79
USP25Q9UHP3 RPS24P13-201ENST00000442520 397 ntBASIC3.88□□□□□ -1.79
USP25Q9UHP3 AC008264.1-201ENST00000447612 367 ntBASIC3.88□□□□□ -1.79
USP25Q9UHP3 CECR9-201ENST00000453421 199 ntBASIC3.88□□□□□ -1.79
USP25Q9UHP3 AC010099.1-201ENST00000455434 375 ntBASIC3.88□□□□□ -1.79
USP25Q9UHP3 SCARNA18-201ENST00000459004 134 ntBASIC3.88□□□□□ -1.79
USP25Q9UHP3 Y_RNA.635-201ENST00000459041 101 ntBASIC3.88□□□□□ -1.79
USP25Q9UHP3 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.88□□□□□ -1.79
USP25Q9UHP3 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.88□□□□□ -1.79
USP25Q9UHP3 Y_RNA.689-201ENST00000516589 107 ntBASIC3.88□□□□□ -1.79
USP25Q9UHP3 SNORA70.18-201ENST00000516696 98 ntBASIC3.88□□□□□ -1.79
USP25Q9UHP3 SNORD59.2-201ENST00000516873 68 ntBASIC3.88□□□□□ -1.79
USP25Q9UHP3 AL121821.2-201ENST00000556081 394 ntBASIC3.88□□□□□ -1.79
USP25Q9UHP3 AC093249.1-201ENST00000567049 203 ntBASIC3.88□□□□□ -1.79
USP25Q9UHP3 MIR4444-1-201ENST00000581696 74 ntBASIC3.88□□□□□ -1.79
USP25Q9UHP3 MIR4444-2-201ENST00000584390 74 ntBASIC3.88□□□□□ -1.79
USP25Q9UHP3 AC006557.5-201ENST00000603126 811 ntBASIC3.88□□□□□ -1.79
USP25Q9UHP3 AC092747.3-201ENST00000603769 301 ntBASIC3.88□□□□□ -1.79
USP25Q9UHP3 AL359547.2-201ENST00000615810 418 ntBASIC3.88□□□□□ -1.79
USP25Q9UHP3 MIR6075-201ENST00000620782 95 ntBASIC3.88□□□□□ -1.79
USP25Q9UHP3 U4.6-201ENST00000621618 127 ntBASIC3.88□□□□□ -1.79
USP25Q9UHP3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.88□□□□□ -1.79
USP25Q9UHP3 AC110774.1-201ENST00000623567 2018 ntBASIC3.88□□□□□ -1.79
USP25Q9UHP3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
USP25Q9UHP3 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.88□□□□□ -1.79
USP25Q9UHP3 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
USP25Q9UHP3 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
USP25Q9UHP3 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
USP25Q9UHP3 Y_RNA.259-201ENST00000364619 101 ntBASIC3.87□□□□□ -1.79
USP25Q9UHP3 Y_RNA.399-201ENST00000383955 105 ntBASIC3.87□□□□□ -1.79
USP25Q9UHP3 RN7SKP158-201ENST00000410453 326 ntBASIC3.87□□□□□ -1.79
USP25Q9UHP3 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.87□□□□□ -1.79
USP25Q9UHP3 AC080125.1-201ENST00000414888 684 ntBASIC3.87□□□□□ -1.79
USP25Q9UHP3 MTCO2P27-201ENST00000420740 428 ntBASIC3.87□□□□□ -1.79
USP25Q9UHP3 HSPD1P21-201ENST00000436541 245 ntBASIC3.87□□□□□ -1.79
USP25Q9UHP3 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.87□□□□□ -1.79
USP25Q9UHP3 MTND4P19-201ENST00000446659 478 ntBASIC3.87□□□□□ -1.79
USP25Q9UHP3 FABP5P15-201ENST00000453566 214 ntBASIC3.87□□□□□ -1.79
USP25Q9UHP3 Y_RNA.639-201ENST00000458981 102 ntBASIC3.87□□□□□ -1.79
USP25Q9UHP3 HMGN1P10-201ENST00000474557 553 ntBASIC3.87□□□□□ -1.79
USP25Q9UHP3 RNU6-189P-201ENST00000516120 101 ntBASIC3.87□□□□□ -1.79
USP25Q9UHP3 RNU6-123P-201ENST00000516163 102 ntBASIC3.87□□□□□ -1.79
USP25Q9UHP3 RNU6-1088P-201ENST00000516850 104 ntBASIC3.87□□□□□ -1.79
USP25Q9UHP3 SCARNA20.6-201ENST00000517251 106 ntBASIC3.87□□□□□ -1.79
USP25Q9UHP3 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.87□□□□□ -1.79
USP25Q9UHP3 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.87□□□□□ -1.79
USP25Q9UHP3 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.87□□□□□ -1.79
USP25Q9UHP3 TRAV37-201ENST00000553906 342 ntBASIC3.87□□□□□ -1.79
USP25Q9UHP3 AC020661.2-201ENST00000560114 134 ntBASIC3.87□□□□□ -1.79
USP25Q9UHP3 MTCO3P23-201ENST00000561363 289 ntBASIC3.87□□□□□ -1.79
USP25Q9UHP3 FRG2DP-202ENST00000566967 323 ntBASIC3.87□□□□□ -1.79
USP25Q9UHP3 AL138889.2-201ENST00000603883 242 ntBASIC3.87□□□□□ -1.79
USP25Q9UHP3 AC004805.2-201ENST00000605382 482 ntBASIC3.87□□□□□ -1.79
USP25Q9UHP3 AC134503.1-201ENST00000633048 54 ntBASIC3.87□□□□□ -1.79
USP25Q9UHP3 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.87□□□□□ -1.79
USP25Q9UHP3 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.87□□□□□ -1.79
USP25Q9UHP3 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.87□□□□□ -1.79
USP25Q9UHP3 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
USP25Q9UHP3 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
USP25Q9UHP3 AC233263.6-201ENST00000631132 1963 ntBASIC3.87□□□□□ -1.79
USP25Q9UHP3 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
USP25Q9UHP3 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.86□□□□□ -1.79
USP25Q9UHP3 SNORD42.2-201ENST00000365570 69 ntBASIC3.86□□□□□ -1.79
USP25Q9UHP3 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
USP25Q9UHP3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
USP25Q9UHP3 SNORD116-29-201ENST00000384516 83 ntBASIC3.86□□□□□ -1.79
USP25Q9UHP3 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
USP25Q9UHP3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.86□□□□□ -1.79
USP25Q9UHP3 AC104058.1-201ENST00000448028 297 ntBASIC3.86□□□□□ -1.79
USP25Q9UHP3 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.86□□□□□ -1.79
USP25Q9UHP3 RNU7-152P-201ENST00000458982 64 ntBASIC3.86□□□□□ -1.79
USP25Q9UHP3 snoU13.28-201ENST00000459235 104 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms