Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 snoU109.1-201ENST00000459339 135 ntBASIC1.62□□□□□ -2.15
VAPAQ9P0L0 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
VAPAQ9P0L0 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.62□□□□□ -2.15
VAPAQ9P0L0 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.62□□□□□ -2.15
VAPAQ9P0L0 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.62□□□□□ -2.15
VAPAQ9P0L0 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.62□□□□□ -2.15
VAPAQ9P0L0 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.62□□□□□ -2.15
VAPAQ9P0L0 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.62□□□□□ -2.15
VAPAQ9P0L0 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC1.62□□□□□ -2.15
VAPAQ9P0L0 RPL30P11-203ENST00000598995 310 ntBASIC1.62□□□□□ -2.15
VAPAQ9P0L0 ELOCP5-201ENST00000604924 333 ntBASIC1.62□□□□□ -2.15
VAPAQ9P0L0 RNU6-88P-201ENST00000606801 100 ntBASIC1.62□□□□□ -2.15
VAPAQ9P0L0 RNU6-91P-201ENST00000607774 107 ntBASIC1.62□□□□□ -2.15
VAPAQ9P0L0 AL138960.2-201ENST00000625145 535 ntBASIC1.62□□□□□ -2.15
VAPAQ9P0L0 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.62□□□□□ -2.15
VAPAQ9P0L0 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.61□□□□□ -2.15
VAPAQ9P0L0 SNORD115-3-201ENST00000363100 82 ntBASIC1.61□□□□□ -2.15
VAPAQ9P0L0 RNA5SP363-201ENST00000365072 115 ntBASIC1.61□□□□□ -2.15
VAPAQ9P0L0 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
VAPAQ9P0L0 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
VAPAQ9P0L0 FTH1P15-201ENST00000406984 280 ntBASIC1.61□□□□□ -2.15
VAPAQ9P0L0 FCF1P10-201ENST00000407590 479 ntBASIC1.61□□□□□ -2.15
VAPAQ9P0L0 MIR1305-201ENST00000408300 86 ntBASIC1.61□□□□□ -2.15
VAPAQ9P0L0 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.61□□□□□ -2.15
VAPAQ9P0L0 RPS3AP37-201ENST00000419176 745 ntBASIC1.61□□□□□ -2.15
VAPAQ9P0L0 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.61□□□□□ -2.15
VAPAQ9P0L0 AC244636.1-201ENST00000421152 228 ntBASIC1.61□□□□□ -2.15
VAPAQ9P0L0 RAC1P6-201ENST00000423911 575 ntBASIC1.61□□□□□ -2.15
VAPAQ9P0L0 TXNL1P1-201ENST00000429528 554 ntBASIC1.61□□□□□ -2.15
VAPAQ9P0L0 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.61□□□□□ -2.15
VAPAQ9P0L0 USP9YP24-201ENST00000434374 697 ntBASIC1.61□□□□□ -2.15
VAPAQ9P0L0 AL078601.1-201ENST00000444542 271 ntBASIC1.61□□□□□ -2.15
VAPAQ9P0L0 AL358794.1-201ENST00000445689 381 ntBASIC1.61□□□□□ -2.15
VAPAQ9P0L0 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
VAPAQ9P0L0 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.61□□□□□ -2.15
VAPAQ9P0L0 AL137159.1-201ENST00000452808 512 ntBASIC1.61□□□□□ -2.15
VAPAQ9P0L0 KATNBL1P6-201ENST00000453433 915 ntBASIC1.61□□□□□ -2.15
VAPAQ9P0L0 RNU6-953P-201ENST00000459154 107 ntBASIC1.61□□□□□ -2.15
VAPAQ9P0L0 RPL7P43-201ENST00000478876 753 ntBASIC1.61□□□□□ -2.15
VAPAQ9P0L0 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.61□□□□□ -2.15
VAPAQ9P0L0 ANXA2P1-201ENST00000505539 926 ntBASIC1.61□□□□□ -2.15
VAPAQ9P0L0 MTND4P2-201ENST00000507767 1203 ntBASIC1.61□□□□□ -2.15
VAPAQ9P0L0 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.61□□□□□ -2.15
VAPAQ9P0L0 RPS3AP4-201ENST00000555161 764 ntBASIC1.61□□□□□ -2.15
VAPAQ9P0L0 AC023813.2-201ENST00000564321 469 ntBASIC1.61□□□□□ -2.15
VAPAQ9P0L0 AL355472.4-201ENST00000610233 626 ntBASIC1.61□□□□□ -2.15
VAPAQ9P0L0 AC087241.4-201ENST00000612441 480 ntBASIC1.61□□□□□ -2.15
VAPAQ9P0L0 AL589994.2-201ENST00000621124 579 ntBASIC1.61□□□□□ -2.15
VAPAQ9P0L0 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.61□□□□□ -2.15
VAPAQ9P0L0 AL356596.1-201ENST00000624230 379 ntBASIC1.61□□□□□ -2.15
VAPAQ9P0L0 AC099786.3-201ENST00000565735 1410 ntBASIC1.6□□□□□ -2.15
VAPAQ9P0L0 RNU6-858P-201ENST00000362436 107 ntBASIC1.6□□□□□ -2.15
VAPAQ9P0L0 RNU5E-1-201ENST00000362477 120 ntBASIC1.6□□□□□ -2.15
VAPAQ9P0L0 SNORD114-19-201ENST00000363072 75 ntBASIC1.6□□□□□ -2.15
VAPAQ9P0L0 MIR301A-201ENST00000385261 86 ntBASIC1.6□□□□□ -2.15
VAPAQ9P0L0 SNORA40.19-201ENST00000390846 128 ntBASIC1.6□□□□□ -2.15
VAPAQ9P0L0 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.6□□□□□ -2.15
VAPAQ9P0L0 MTATP6P20-201ENST00000414147 562 ntBASIC1.6□□□□□ -2.15
VAPAQ9P0L0 AC138623.1-201ENST00000418060 216 ntBASIC1.6□□□□□ -2.15
VAPAQ9P0L0 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.6□□□□□ -2.15
VAPAQ9P0L0 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.6□□□□□ -2.15
VAPAQ9P0L0 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.6□□□□□ -2.15
VAPAQ9P0L0 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.6□□□□□ -2.15
VAPAQ9P0L0 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.6□□□□□ -2.15
VAPAQ9P0L0 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.6□□□□□ -2.15
VAPAQ9P0L0 MTND1P3-201ENST00000484956 952 ntBASIC1.6□□□□□ -2.15
VAPAQ9P0L0 RPS3AP22-201ENST00000488297 769 ntBASIC1.6□□□□□ -2.15
VAPAQ9P0L0 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.6□□□□□ -2.15
VAPAQ9P0L0 NDUFA5P6-201ENST00000542110 379 ntBASIC1.6□□□□□ -2.15
VAPAQ9P0L0 DEFB122-202ENST00000569013 197 ntBASIC1.6□□□□□ -2.15
VAPAQ9P0L0 MIR544B-201ENST00000582372 78 ntBASIC1.6□□□□□ -2.15
VAPAQ9P0L0 AC018638.7-201ENST00000605836 1114 ntBASIC1.6□□□□□ -2.15
VAPAQ9P0L0 AC106052.1-201ENST00000608029 497 ntBASIC1.6□□□□□ -2.15
VAPAQ9P0L0 AC072039.2-201ENST00000608883 439 ntBASIC1.6□□□□□ -2.15
VAPAQ9P0L0 AC096772.1-201ENST00000609146 564 ntBASIC1.6□□□□□ -2.15
VAPAQ9P0L0 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
VAPAQ9P0L0 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.59□□□□□ -2.15
VAPAQ9P0L0 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.59□□□□□ -2.15
VAPAQ9P0L0 SNORA4.1-201ENST00000364263 144 ntBASIC1.59□□□□□ -2.15
VAPAQ9P0L0 RNU4-42P-201ENST00000364738 142 ntBASIC1.59□□□□□ -2.15
VAPAQ9P0L0 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.15
VAPAQ9P0L0 RNU6-723P-201ENST00000383973 107 ntBASIC1.59□□□□□ -2.15
VAPAQ9P0L0 RNU6-253P-201ENST00000384730 105 ntBASIC1.59□□□□□ -2.15
VAPAQ9P0L0 RN7SKP192-201ENST00000411291 327 ntBASIC1.59□□□□□ -2.15
VAPAQ9P0L0 RNA5SP508-201ENST00000411327 119 ntBASIC1.59□□□□□ -2.15
VAPAQ9P0L0 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.59□□□□□ -2.15
VAPAQ9P0L0 IFNA20P-201ENST00000436840 528 ntBASIC1.59□□□□□ -2.15
VAPAQ9P0L0 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.59□□□□□ -2.15
VAPAQ9P0L0 RNA5SP182-201ENST00000516064 82 ntBASIC1.59□□□□□ -2.15
VAPAQ9P0L0 RNU6-667P-201ENST00000517186 102 ntBASIC1.59□□□□□ -2.15
VAPAQ9P0L0 RNU6-586P-201ENST00000517265 104 ntBASIC1.59□□□□□ -2.15
VAPAQ9P0L0 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.59□□□□□ -2.15
VAPAQ9P0L0 DUXAP5-201ENST00000529668 529 ntBASIC1.59□□□□□ -2.15
VAPAQ9P0L0 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.59□□□□□ -2.15
VAPAQ9P0L0 HSBP1P1-201ENST00000555205 166 ntBASIC1.59□□□□□ -2.15
VAPAQ9P0L0 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.59□□□□□ -2.15
VAPAQ9P0L0 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
VAPAQ9P0L0 MIR4648-201ENST00000580107 72 ntBASIC1.59□□□□□ -2.15
VAPAQ9P0L0 AL078605.1-201ENST00000603529 500 ntBASIC1.59□□□□□ -2.15
VAPAQ9P0L0 SNRPGP17-201ENST00000603780 214 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 151.3 ms