| NLGN3 | Q9NZ94 | AL031779.1-201 | ENST00000415663 | 330 nt | BASIC | 2.62 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AL355388.1-201 | ENST00000415726 | 401 nt | TSL 2 BASIC | 2.62 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AL109913.1-201 | ENST00000421173 | 514 nt | BASIC | 2.62 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | ELOCP14-201 | ENST00000428070 | 331 nt | BASIC | 2.62 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AL359081.1-201 | ENST00000432083 | 615 nt | TSL 2 BASIC | 2.62 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AL591212.2-201 | ENST00000433923 | 257 nt | BASIC | 2.62 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AL714022.1-201 | ENST00000439897 | 151 nt | BASIC | 2.62 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | ELOCP7-201 | ENST00000439968 | 331 nt | BASIC | 2.62 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | MTND1P1-201 | ENST00000445453 | 368 nt | BASIC | 2.62 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | GSTA11P-201 | ENST00000452866 | 669 nt | BASIC | 2.62 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | CECR9-201 | ENST00000453421 | 199 nt | BASIC | 2.62 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | RPL12P25-201 | ENST00000455592 | 494 nt | BASIC | 2.62 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | LINC01038-201 | ENST00000457858 | 428 nt | TSL 3 BASIC | 2.62 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | RPL9P33-201 | ENST00000484311 | 566 nt | BASIC | 2.62 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | SEM1P1-201 | ENST00000506694 | 209 nt | BASIC | 2.62 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AC098591.2-201 | ENST00000510152 | 315 nt | BASIC | 2.62 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | RNA5SP148-201 | ENST00000516527 | 94 nt | BASIC | 2.62 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | Y_RNA.689-201 | ENST00000516589 | 107 nt | BASIC | 2.62 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AC113145.1-201 | ENST00000522408 | 412 nt | TSL 5 BASIC | 2.62 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | LINC02545-201 | ENST00000525381 | 306 nt | TSL 3 BASIC | 2.62 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AC084879.2-201 | ENST00000551656 | 369 nt | TSL 3 BASIC | 2.62 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AC009145.1-201 | ENST00000563230 | 433 nt | TSL 3 BASIC | 2.62 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | MTCO3P13-201 | ENST00000577757 | 781 nt | BASIC | 2.62 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | MIR3605-201 | ENST00000583214 | 100 nt | BASIC | 2.62 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AC008521.1-201 | ENST00000587471 | 187 nt | BASIC | 2.62 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | LINC01897-203 | ENST00000591503 | 369 nt | TSL 2 BASIC | 2.62 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AC068790.6-201 | ENST00000602558 | 258 nt | BASIC | 2.62 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AC004492.1-201 | ENST00000607036 | 742 nt | BASIC | 2.62 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AC013562.2-201 | ENST00000611632 | 603 nt | BASIC | 2.62 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AC012409.4-201 | ENST00000612923 | 249 nt | BASIC | 2.62 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AC025034.2-201 | ENST00000623264 | 286 nt | BASIC | 2.62 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AC124864.2-201 | ENST00000624736 | 186 nt | BASIC | 2.62 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | ZNF680P1-201 | ENST00000436625 | 1469 nt | BASIC | 2.62 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | DYNC2H1-202 | ENST00000375735 | 13678 nt | APPRIS ALT1 TSL 1 (best) BASIC | 2.62 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | SYTL2-230 | ENST00000634661 | 6672 nt | TSL 5 BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | MACC1-202 | ENST00000400331 | 9159 nt | APPRIS P1 TSL 2 BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | GABRG2-209 | ENST00000638660 | 3799 nt | TSL 5 BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | HSFY1-202 | ENST00000309834 | 1038 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | LINC00305-201 | ENST00000323355 | 873 nt | TSL 1 (best) BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | HSFY2-202 | ENST00000344884 | 1038 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | Y_RNA.245-201 | ENST00000364493 | 95 nt | BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AKAP14-203 | ENST00000371425 | 793 nt | APPRIS ALT2 TSL 5 BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | DEFB119-202 | ENST00000376315 | 324 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | RNU1-109P-201 | ENST00000383960 | 147 nt | BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | RNU6-1215P-201 | ENST00000384441 | 102 nt | BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | RNU6-140P-201 | ENST00000384566 | 108 nt | BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | MIR454-201 | ENST00000390180 | 115 nt | BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AL356057.3-201 | ENST00000402607 | 340 nt | BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | RNU6-193P-201 | ENST00000410977 | 107 nt | BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AL117337.1-201 | ENST00000412789 | 444 nt | TSL 3 BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AC104462.1-201 | ENST00000414565 | 447 nt | TSL 2 BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | BX682237.1-201 | ENST00000415016 | 335 nt | BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AL513477.1-202 | ENST00000417061 | 214 nt | BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | LINC00368-201 | ENST00000422994 | 650 nt | TSL 1 (best) BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AL589986.2-201 | ENST00000429352 | 397 nt | TSL 2 BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | HMGB1P27-201 | ENST00000431429 | 603 nt | BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | MTND4P25-201 | ENST00000441039 | 533 nt | BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AL162395.1-201 | ENST00000457882 | 422 nt | BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AC093899.1-201 | ENST00000457984 | 376 nt | BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AC003982.1-202 | ENST00000469928 | 248 nt | BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AC128713.1-201 | ENST00000471495 | 306 nt | BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | RPL39P36-201 | ENST00000490784 | 156 nt | BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | LINC01997-201 | ENST00000494900 | 429 nt | TSL 2 BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | RNU6-677P-201 | ENST00000516914 | 101 nt | BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AP003730.2-202 | ENST00000527281 | 774 nt | TSL 3 BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AP000462.3-201 | ENST00000545593 | 330 nt | TSL 5 BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AL355076.2-202 | ENST00000553754 | 574 nt | TSL 4 BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AL359212.1-201 | ENST00000556608 | 614 nt | BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | IGKV1-33-202 | ENST00000558152 | 324 nt | APPRIS ALT2 TSL 5 BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | MIR4775-201 | ENST00000581168 | 75 nt | BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | IGKV1D-33-202 | ENST00000611734 | 324 nt | APPRIS ALT2 TSL 5 BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | C8orf59-208 | ENST00000612809 | 475 nt | APPRIS P1 TSL 1 (best) BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AL590808.1-201 | ENST00000618696 | 141 nt | BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AC023490.3-201 | ENST00000621762 | 358 nt | TSL 3 BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AL359880.1-201 | ENST00000621879 | 266 nt | BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AL157786.1-207 | ENST00000627771 | 695 nt | BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AP000550.4-201 | ENST00000639507 | 358 nt | TSL 3 BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | EBAG9-210 | ENST00000620557 | 2186 nt | APPRIS P1 TSL 3 BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AL355596.1-201 | ENST00000565399 | 3996 nt | BASIC | 2.61 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | ZNF519P1-201 | ENST00000449011 | 1626 nt | BASIC | 2.6 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AC103710.2-202 | ENST00000641454 | 2853 nt | BASIC | 2.6 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | RAPGEF6-210 | ENST00000512052 | 3535 nt | TSL 2 BASIC | 2.6 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | ELF2P3-201 | ENST00000445099 | 1506 nt | BASIC | 2.6 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | OR4G2P-201 | ENST00000328113 | 903 nt | BASIC | 2.6 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | RNU6-179P-201 | ENST00000363350 | 107 nt | BASIC | 2.6 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | RNU6-1180P-201 | ENST00000364935 | 107 nt | BASIC | 2.6 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | RNU4-48P-201 | ENST00000365559 | 182 nt | BASIC | 2.6 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | Y_RNA.576-201 | ENST00000384781 | 102 nt | BASIC | 2.6 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | MTCO3P40-201 | ENST00000392516 | 676 nt | BASIC | 2.6 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | RNU6ATAC16P-201 | ENST00000408591 | 138 nt | BASIC | 2.6 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AL356134.1-201 | ENST00000419815 | 373 nt | TSL 3 BASIC | 2.6 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AC073311.1-201 | ENST00000420146 | 505 nt | TSL 5 BASIC | 2.6 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | RPL7P37-201 | ENST00000425095 | 738 nt | BASIC | 2.6 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | ZNF863P-201 | ENST00000426746 | 417 nt | BASIC | 2.6 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AL365496.1-201 | ENST00000426885 | 215 nt | BASIC | 2.6 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | MYL8P-204 | ENST00000431574 | 518 nt | BASIC | 2.6 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AC112220.1-201 | ENST00000434628 | 355 nt | BASIC | 2.6 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AC091133.1-201 | ENST00000435491 | 483 nt | TSL 3 BASIC | 2.6 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | AC104688.1-201 | ENST00000447158 | 419 nt | TSL 3 BASIC | 2.6 | □□□□□ -1.99 | | |
| NLGN3 | Q9NZ94 | CSN1S2AP-201 | ENST00000451783 | 779 nt | TSL 1 (best) BASIC | 2.6 | □□□□□ -1.99 | | |