Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.44□□□□□ -1.86
USP29Q9HBJ7 Z99571.1-201ENST00000636677 394 ntBASIC3.44□□□□□ -1.86
USP29Q9HBJ7 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.44□□□□□ -1.86
USP29Q9HBJ7 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.44□□□□□ -1.86
USP29Q9HBJ7 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
USP29Q9HBJ7 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.44□□□□□ -1.86
USP29Q9HBJ7 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
USP29Q9HBJ7 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
USP29Q9HBJ7 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
USP29Q9HBJ7 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.43□□□□□ -1.86
USP29Q9HBJ7 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.43□□□□□ -1.86
USP29Q9HBJ7 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.43□□□□□ -1.86
USP29Q9HBJ7 SNORD113-7-201ENST00000363762 77 ntBASIC3.43□□□□□ -1.86
USP29Q9HBJ7 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
USP29Q9HBJ7 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
USP29Q9HBJ7 RNU6-45P-201ENST00000384471 107 ntBASIC3.43□□□□□ -1.86
USP29Q9HBJ7 MIR578-201ENST00000384828 96 ntBASIC3.43□□□□□ -1.86
USP29Q9HBJ7 YPEL5P1-201ENST00000419731 367 ntBASIC3.43□□□□□ -1.86
USP29Q9HBJ7 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.43□□□□□ -1.86
USP29Q9HBJ7 FABP5P15-201ENST00000453566 214 ntBASIC3.43□□□□□ -1.86
USP29Q9HBJ7 HMGN1P18-201ENST00000457642 277 ntBASIC3.43□□□□□ -1.86
USP29Q9HBJ7 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.43□□□□□ -1.86
USP29Q9HBJ7 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.43□□□□□ -1.86
USP29Q9HBJ7 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.43□□□□□ -1.86
USP29Q9HBJ7 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.43□□□□□ -1.86
USP29Q9HBJ7 RNU6-1069P-201ENST00000516612 133 ntBASIC3.43□□□□□ -1.86
USP29Q9HBJ7 AP000889.2-201ENST00000532684 490 ntBASIC3.43□□□□□ -1.86
USP29Q9HBJ7 HPRT1P3-201ENST00000539521 576 ntBASIC3.43□□□□□ -1.86
USP29Q9HBJ7 AC106782.4-201ENST00000568264 210 ntBASIC3.43□□□□□ -1.86
USP29Q9HBJ7 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.43□□□□□ -1.86
USP29Q9HBJ7 AC073539.2-201ENST00000597113 165 ntBASIC3.43□□□□□ -1.86
USP29Q9HBJ7 AC107294.1-201ENST00000609524 467 ntBASIC3.43□□□□□ -1.86
USP29Q9HBJ7 U2.17-201ENST00000611454 95 ntBASIC3.43□□□□□ -1.86
USP29Q9HBJ7 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.43□□□□□ -1.86
USP29Q9HBJ7 SRP72P2-201ENST00000344851 1979 ntBASIC3.43□□□□□ -1.86
USP29Q9HBJ7 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
USP29Q9HBJ7 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
USP29Q9HBJ7 AC008568.2-201ENST00000623862 2313 ntBASIC3.42□□□□□ -1.86
USP29Q9HBJ7 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
USP29Q9HBJ7 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
USP29Q9HBJ7 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.42□□□□□ -1.86
USP29Q9HBJ7 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
USP29Q9HBJ7 RNU1-70P-201ENST00000362618 164 ntBASIC3.42□□□□□ -1.86
USP29Q9HBJ7 U3.42-201ENST00000408746 214 ntBASIC3.42□□□□□ -1.86
USP29Q9HBJ7 RNU2-33P-201ENST00000410344 192 ntBASIC3.42□□□□□ -1.86
USP29Q9HBJ7 RPLP0P7-201ENST00000416050 667 ntBASIC3.42□□□□□ -1.86
USP29Q9HBJ7 BTF3L4P3-201ENST00000418879 476 ntBASIC3.42□□□□□ -1.86
USP29Q9HBJ7 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.42□□□□□ -1.86
USP29Q9HBJ7 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.42□□□□□ -1.86
USP29Q9HBJ7 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.42□□□□□ -1.86
USP29Q9HBJ7 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.42□□□□□ -1.86
USP29Q9HBJ7 AC087884.1-201ENST00000469738 328 ntBASIC3.42□□□□□ -1.86
USP29Q9HBJ7 RPL21P13-201ENST00000488305 481 ntBASIC3.42□□□□□ -1.86
USP29Q9HBJ7 FCF1P8-201ENST00000510322 597 ntBASIC3.42□□□□□ -1.86
USP29Q9HBJ7 SNORA19.2-201ENST00000516013 114 ntBASIC3.42□□□□□ -1.86
USP29Q9HBJ7 SNORA14.1-201ENST00000516113 141 ntBASIC3.42□□□□□ -1.86
USP29Q9HBJ7 Y_RNA.675-201ENST00000516389 149 ntBASIC3.42□□□□□ -1.86
USP29Q9HBJ7 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.42□□□□□ -1.86
USP29Q9HBJ7 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.42□□□□□ -1.86
USP29Q9HBJ7 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.42□□□□□ -1.86
USP29Q9HBJ7 AL355375.2-201ENST00000574825 175 ntBASIC3.42□□□□□ -1.86
USP29Q9HBJ7 MIR3672-201ENST00000584290 82 ntBASIC3.42□□□□□ -1.86
USP29Q9HBJ7 AC012119.1-201ENST00000603184 222 ntBASIC3.42□□□□□ -1.86
USP29Q9HBJ7 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.42□□□□□ -1.86
USP29Q9HBJ7 AL670379.10-201ENST00000604330 253 ntBASIC3.42□□□□□ -1.86
USP29Q9HBJ7 ATP1B3P1-201ENST00000605365 821 ntBASIC3.42□□□□□ -1.86
USP29Q9HBJ7 AL670379.9-201ENST00000605428 253 ntBASIC3.42□□□□□ -1.86
USP29Q9HBJ7 AC104237.2-201ENST00000612456 443 ntBASIC3.42□□□□□ -1.86
USP29Q9HBJ7 FAM157A-202ENST00000615155 405 ntBASIC3.42□□□□□ -1.86
USP29Q9HBJ7 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.42□□□□□ -1.86
USP29Q9HBJ7 AC073476.4-201ENST00000628409 72 ntBASIC3.42□□□□□ -1.86
USP29Q9HBJ7 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
USP29Q9HBJ7 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
USP29Q9HBJ7 AL136164.4-201ENST00000625013 2135 ntBASIC3.41□□□□□ -1.86
USP29Q9HBJ7 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
USP29Q9HBJ7 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
USP29Q9HBJ7 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
USP29Q9HBJ7 RNU6-1252P-201ENST00000363054 104 ntBASIC3.41□□□□□ -1.86
USP29Q9HBJ7 Y_RNA.339-201ENST00000365325 102 ntBASIC3.41□□□□□ -1.86
USP29Q9HBJ7 AL591034.1-201ENST00000407447 340 ntBASIC3.41□□□□□ -1.86
USP29Q9HBJ7 AC063979.1-201ENST00000415539 377 ntBASIC3.41□□□□□ -1.86
USP29Q9HBJ7 RPL7P10-201ENST00000417407 739 ntBASIC3.41□□□□□ -1.86
USP29Q9HBJ7 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.41□□□□□ -1.86
USP29Q9HBJ7 NCOR1P3-201ENST00000420479 303 ntBASIC3.41□□□□□ -1.86
USP29Q9HBJ7 UBE2D3P2-201ENST00000424409 445 ntBASIC3.41□□□□□ -1.86
USP29Q9HBJ7 MTND1P14-201ENST00000427400 950 ntBASIC3.41□□□□□ -1.86
USP29Q9HBJ7 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.41□□□□□ -1.86
USP29Q9HBJ7 AC233279.1-201ENST00000455300 423 ntBASIC3.41□□□□□ -1.86
USP29Q9HBJ7 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.41□□□□□ -1.86
USP29Q9HBJ7 RPL37P6-201ENST00000460682 294 ntBASIC3.41□□□□□ -1.86
USP29Q9HBJ7 RPS23P3-201ENST00000470993 430 ntBASIC3.41□□□□□ -1.86
USP29Q9HBJ7 AC117503.1-201ENST00000472241 394 ntBASIC3.41□□□□□ -1.86
USP29Q9HBJ7 AL160314.1-201ENST00000490836 438 ntBASIC3.41□□□□□ -1.86
USP29Q9HBJ7 AC093663.1-201ENST00000497190 394 ntBASIC3.41□□□□□ -1.86
USP29Q9HBJ7 RNU6-1315P-201ENST00000517187 99 ntBASIC3.41□□□□□ -1.86
USP29Q9HBJ7 SCARNA20.6-201ENST00000517251 106 ntBASIC3.41□□□□□ -1.86
USP29Q9HBJ7 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.41□□□□□ -1.86
USP29Q9HBJ7 AP003122.3-201ENST00000526316 255 ntBASIC3.41□□□□□ -1.86
USP29Q9HBJ7 AC084851.1-201ENST00000529105 249 ntBASIC3.41□□□□□ -1.86
USP29Q9HBJ7 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms