Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
SENP3Q9H4L4 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SENP3Q9H4L4 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC8.74□□□□□ -1.01
SENP3Q9H4L4 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC8.74□□□□□ -1.01
SENP3Q9H4L4 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SENP3Q9H4L4 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
SENP3Q9H4L4 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC8.73□□□□□ -1.01
SENP3Q9H4L4 AL159987.1-201ENST00000347911 293 ntBASIC8.73□□□□□ -1.01
SENP3Q9H4L4 Y_RNA.547-201ENST00000384654 119 ntBASIC8.73□□□□□ -1.01
SENP3Q9H4L4 MIR520G-201ENST00000385064 90 ntBASIC8.73□□□□□ -1.01
SENP3Q9H4L4 RN7SL329P-201ENST00000467740 299 ntBASIC8.73□□□□□ -1.01
SENP3Q9H4L4 AC097467.4-201ENST00000605504 141 ntBASIC8.73□□□□□ -1.01
SENP3Q9H4L4 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC8.73□□□□□ -1.01
SENP3Q9H4L4 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
SENP3Q9H4L4 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SENP3Q9H4L4 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC8.73□□□□□ -1.01
SENP3Q9H4L4 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC8.73□□□□□ -1.01
SENP3Q9H4L4 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC8.73□□□□□ -1.01
SENP3Q9H4L4 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC8.73□□□□□ -1.01
SENP3Q9H4L4 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SENP3Q9H4L4 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SENP3Q9H4L4 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SENP3Q9H4L4 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
SENP3Q9H4L4 SNORD38.1-201ENST00000363863 68 ntBASIC8.72□□□□□ -1.01
SENP3Q9H4L4 RNU6-663P-201ENST00000391105 106 ntBASIC8.72□□□□□ -1.01
SENP3Q9H4L4 AL445685.2-201ENST00000422551 342 ntBASIC8.72□□□□□ -1.01
SENP3Q9H4L4 RNU7-14P-201ENST00000459331 62 ntBASIC8.72□□□□□ -1.01
SENP3Q9H4L4 UBL5P1-201ENST00000507979 193 ntBASIC8.72□□□□□ -1.01
SENP3Q9H4L4 AL161713.1-201ENST00000555538 145 ntBASIC8.72□□□□□ -1.01
SENP3Q9H4L4 AC024255.1-201ENST00000614376 102 ntBASIC8.72□□□□□ -1.01
SENP3Q9H4L4 AL591926.8-201ENST00000616876 211 ntBASIC8.72□□□□□ -1.01
SENP3Q9H4L4 Clostridiales-1.3-201ENST00000637703 147 ntBASIC8.72□□□□□ -1.01
SENP3Q9H4L4 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
SENP3Q9H4L4 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
SENP3Q9H4L4 MAPK10-383ENST00000642032 3390 ntBASIC8.72□□□□□ -1.01
SENP3Q9H4L4 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SENP3Q9H4L4 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
SENP3Q9H4L4 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
SENP3Q9H4L4 LRRC37A16P-202ENST00000586022 3725 ntBASIC8.71□□□□□ -1.01
SENP3Q9H4L4 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
SENP3Q9H4L4 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
SENP3Q9H4L4 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
SENP3Q9H4L4 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
SENP3Q9H4L4 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
SENP3Q9H4L4 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
SENP3Q9H4L4 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC8.71□□□□□ -1.01
SENP3Q9H4L4 SNORD115-14-201ENST00000363090 81 ntBASIC8.71□□□□□ -1.02
SENP3Q9H4L4 AL627390.1-201ENST00000396055 340 ntBASIC8.71□□□□□ -1.02
SENP3Q9H4L4 RN7SKP125-201ENST00000410481 302 ntBASIC8.71□□□□□ -1.02
SENP3Q9H4L4 AC009963.2-201ENST00000453431 138 ntBASIC8.71□□□□□ -1.02
SENP3Q9H4L4 RNU7-113P-201ENST00000459273 62 ntBASIC8.71□□□□□ -1.02
SENP3Q9H4L4 MIR4436B2-201ENST00000581415 91 ntBASIC8.71□□□□□ -1.02
SENP3Q9H4L4 MIR4436B1-201ENST00000583272 91 ntBASIC8.71□□□□□ -1.02
SENP3Q9H4L4 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
SENP3Q9H4L4 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
SENP3Q9H4L4 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC8.71□□□□□ -1.02
SENP3Q9H4L4 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC8.71□□□□□ -1.02
SENP3Q9H4L4 BCLAF1P1-201ENST00000505813 2752 ntBASIC8.71□□□□□ -1.02
SENP3Q9H4L4 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
SENP3Q9H4L4 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
SENP3Q9H4L4 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC8.71□□□□□ -1.02
SENP3Q9H4L4 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
SENP3Q9H4L4 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC8.71□□□□□ -1.02
SENP3Q9H4L4 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
SENP3Q9H4L4 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
SENP3Q9H4L4 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SENP3Q9H4L4 RNA5SP500-201ENST00000364486 119 ntBASIC8.7□□□□□ -1.02
SENP3Q9H4L4 MIR141-201ENST00000384975 95 ntBASIC8.7□□□□□ -1.02
SENP3Q9H4L4 RNU6-1197P-201ENST00000391183 107 ntBASIC8.7□□□□□ -1.02
SENP3Q9H4L4 AC010343.2-201ENST00000510162 224 ntBASIC8.7□□□□□ -1.02
SENP3Q9H4L4 BX510359.5-201ENST00000515651 304 ntBASIC8.7□□□□□ -1.02
SENP3Q9H4L4 SNORA70.20-201ENST00000516848 126 ntBASIC8.7□□□□□ -1.02
SENP3Q9H4L4 RNU6-1073P-201ENST00000517182 106 ntBASIC8.7□□□□□ -1.02
SENP3Q9H4L4 SNRPGP15-201ENST00000600149 222 ntBASIC8.7□□□□□ -1.02
SENP3Q9H4L4 HOTTIP_3.1-201ENST00000619957 337 ntBASIC8.7□□□□□ -1.02
SENP3Q9H4L4 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC8.7□□□□□ -1.02
SENP3Q9H4L4 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SENP3Q9H4L4 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC8.7□□□□□ -1.02
SENP3Q9H4L4 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SENP3Q9H4L4 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
SENP3Q9H4L4 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC8.7□□□□□ -1.02
SENP3Q9H4L4 AC010329.1-201ENST00000593903 8328 ntBASIC8.7□□□□□ -1.02
SENP3Q9H4L4 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
SENP3Q9H4L4 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC8.7□□□□□ -1.02
SENP3Q9H4L4 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SENP3Q9H4L4 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC8.7□□□□□ -1.02
SENP3Q9H4L4 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SENP3Q9H4L4 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
SENP3Q9H4L4 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SENP3Q9H4L4 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC8.7□□□□□ -1.02
SENP3Q9H4L4 AC004944.1-201ENST00000517807 3059 ntBASIC8.69□□□□□ -1.02
SENP3Q9H4L4 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SENP3Q9H4L4 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SENP3Q9H4L4 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SENP3Q9H4L4 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SENP3Q9H4L4 MIR375-201ENST00000362103 64 ntBASIC8.69□□□□□ -1.02
SENP3Q9H4L4 RNU6-1210P-201ENST00000363775 107 ntBASIC8.69□□□□□ -1.02
SENP3Q9H4L4 MIR550A3-201ENST00000390735 95 ntBASIC8.69□□□□□ -1.02
SENP3Q9H4L4 TOMM22P1-201ENST00000418578 312 ntBASIC8.69□□□□□ -1.02
SENP3Q9H4L4 snoU13.11-201ENST00000459219 104 ntBASIC8.69□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 293.1 ms