Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 AL441985.1-201ENST00000457727 251 ntBASIC1.28□□□□□ -2.2
VCX3BQ9H321 AL672167.3-201ENST00000465951 960 ntBASIC1.28□□□□□ -2.2
VCX3BQ9H321 RPL36AP48-201ENST00000485521 314 ntBASIC1.28□□□□□ -2.2
VCX3BQ9H321 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.28□□□□□ -2.2
VCX3BQ9H321 AC112198.4-201ENST00000515450 351 ntBASIC1.28□□□□□ -2.2
VCX3BQ9H321 SNORA25.11-201ENST00000515935 105 ntBASIC1.28□□□□□ -2.2
VCX3BQ9H321 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC1.28□□□□□ -2.2
VCX3BQ9H321 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.28□□□□□ -2.2
VCX3BQ9H321 LRRC6P1-201ENST00000532188 885 ntBASIC1.28□□□□□ -2.2
VCX3BQ9H321 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.28□□□□□ -2.2
VCX3BQ9H321 AC019288.1-201ENST00000557918 224 ntBASIC1.28□□□□□ -2.2
VCX3BQ9H321 AC060771.1-201ENST00000582031 164 ntBASIC1.28□□□□□ -2.2
VCX3BQ9H321 AC091057.3-201ENST00000602684 733 ntBASIC1.28□□□□□ -2.2
VCX3BQ9H321 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.28□□□□□ -2.2
VCX3BQ9H321 AL109620.1-201ENST00000618738 1197 ntBASIC1.28□□□□□ -2.2
VCX3BQ9H321 AC123767.1-202ENST00000620407 817 ntBASIC1.28□□□□□ -2.2
VCX3BQ9H321 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.28□□□□□ -2.2
VCX3BQ9H321 AC126544.2-201ENST00000625174 749 ntBASIC1.28□□□□□ -2.2
VCX3BQ9H321 AC097655.1-201ENST00000635075 318 ntBASIC1.28□□□□□ -2.2
VCX3BQ9H321 RNU6-853P-201ENST00000364306 107 ntBASIC1.27□□□□□ -2.21
VCX3BQ9H321 RNU1-57P-201ENST00000384491 166 ntBASIC1.27□□□□□ -2.21
VCX3BQ9H321 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.27□□□□□ -2.21
VCX3BQ9H321 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.27□□□□□ -2.21
VCX3BQ9H321 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.27□□□□□ -2.21
VCX3BQ9H321 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.27□□□□□ -2.21
VCX3BQ9H321 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.27□□□□□ -2.21
VCX3BQ9H321 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.27□□□□□ -2.21
VCX3BQ9H321 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
VCX3BQ9H321 AC069306.1-201ENST00000507006 843 ntBASIC1.27□□□□□ -2.21
VCX3BQ9H321 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC1.27□□□□□ -2.21
VCX3BQ9H321 AC093012.1-202ENST00000549403 582 ntBASIC1.27□□□□□ -2.21
VCX3BQ9H321 RPL21P5-201ENST00000554662 472 ntBASIC1.27□□□□□ -2.21
VCX3BQ9H321 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.27□□□□□ -2.21
VCX3BQ9H321 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.27□□□□□ -2.21
VCX3BQ9H321 RPL21P136-201ENST00000605378 396 ntBASIC1.27□□□□□ -2.21
VCX3BQ9H321 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.27□□□□□ -2.21
VCX3BQ9H321 AC021755.4-201ENST00000616620 456 ntBASIC1.27□□□□□ -2.21
VCX3BQ9H321 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.27□□□□□ -2.21
VCX3BQ9H321 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.26□□□□□ -2.21
VCX3BQ9H321 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
VCX3BQ9H321 NACAP2-201ENST00000318548 624 ntBASIC1.26□□□□□ -2.21
VCX3BQ9H321 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
VCX3BQ9H321 SNORA25.8-201ENST00000364831 128 ntBASIC1.26□□□□□ -2.21
VCX3BQ9H321 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.26□□□□□ -2.21
VCX3BQ9H321 MIR618-201ENST00000385287 98 ntBASIC1.26□□□□□ -2.21
VCX3BQ9H321 RNU11-3P-201ENST00000391111 133 ntBASIC1.26□□□□□ -2.21
VCX3BQ9H321 SNORA40.18-201ENST00000391200 128 ntBASIC1.26□□□□□ -2.21
VCX3BQ9H321 AL591034.2-201ENST00000402839 359 ntBASIC1.26□□□□□ -2.21
VCX3BQ9H321 AL139415.2-201ENST00000431968 163 ntBASIC1.26□□□□□ -2.21
VCX3BQ9H321 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.26□□□□□ -2.21
VCX3BQ9H321 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC1.26□□□□□ -2.21
VCX3BQ9H321 AC005094.1-201ENST00000440420 368 ntBASIC1.26□□□□□ -2.21
VCX3BQ9H321 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.26□□□□□ -2.21
VCX3BQ9H321 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.26□□□□□ -2.21
VCX3BQ9H321 EEF1E1P1-201ENST00000446998 430 ntBASIC1.26□□□□□ -2.21
VCX3BQ9H321 ELOCP30-201ENST00000447108 299 ntBASIC1.26□□□□□ -2.21
VCX3BQ9H321 AP000542.1-201ENST00000448473 371 ntBASIC1.26□□□□□ -2.21
VCX3BQ9H321 OR6C5P-201ENST00000452388 923 ntBASIC1.26□□□□□ -2.21
VCX3BQ9H321 AC092001.1-201ENST00000453012 261 ntBASIC1.26□□□□□ -2.21
VCX3BQ9H321 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.26□□□□□ -2.21
VCX3BQ9H321 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
VCX3BQ9H321 RPL37P6-201ENST00000460682 294 ntBASIC1.26□□□□□ -2.21
VCX3BQ9H321 AC005908.1-201ENST00000468701 347 ntBASIC1.26□□□□□ -2.21
VCX3BQ9H321 SNORA26.10-201ENST00000516427 141 ntBASIC1.26□□□□□ -2.21
VCX3BQ9H321 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.26□□□□□ -2.21
VCX3BQ9H321 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
VCX3BQ9H321 AP004247.1-201ENST00000531556 1289 ntBASIC1.26□□□□□ -2.21
VCX3BQ9H321 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.26□□□□□ -2.21
VCX3BQ9H321 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.26□□□□□ -2.21
VCX3BQ9H321 AC068338.1-201ENST00000565567 176 ntBASIC1.26□□□□□ -2.21
VCX3BQ9H321 SNORD53B-201ENST00000577887 78 ntBASIC1.26□□□□□ -2.21
VCX3BQ9H321 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.26□□□□□ -2.21
VCX3BQ9H321 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.26□□□□□ -2.21
VCX3BQ9H321 AC021646.1-201ENST00000605469 484 ntBASIC1.26□□□□□ -2.21
VCX3BQ9H321 MIR8074-201ENST00000615081 81 ntBASIC1.26□□□□□ -2.21
VCX3BQ9H321 PCMTD1P7-201ENST00000634506 357 ntBASIC1.26□□□□□ -2.21
VCX3BQ9H321 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.26□□□□□ -2.21
VCX3BQ9H321 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
VCX3BQ9H321 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.26□□□□□ -2.21
VCX3BQ9H321 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
VCX3BQ9H321 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
VCX3BQ9H321 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
VCX3BQ9H321 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.25□□□□□ -2.21
VCX3BQ9H321 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
VCX3BQ9H321 RNU6-512P-201ENST00000364438 103 ntBASIC1.25□□□□□ -2.21
VCX3BQ9H321 MIR19A-201ENST00000384878 82 ntBASIC1.25□□□□□ -2.21
VCX3BQ9H321 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
VCX3BQ9H321 SNORA67.6-201ENST00000391093 99 ntBASIC1.25□□□□□ -2.21
VCX3BQ9H321 MIR1323-201ENST00000408090 73 ntBASIC1.25□□□□□ -2.21
VCX3BQ9H321 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.25□□□□□ -2.21
VCX3BQ9H321 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.25□□□□□ -2.21
VCX3BQ9H321 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.25□□□□□ -2.21
VCX3BQ9H321 AL831737.1-201ENST00000441288 271 ntBASIC1.25□□□□□ -2.21
VCX3BQ9H321 PAXBP1P1-201ENST00000449315 447 ntBASIC1.25□□□□□ -2.21
VCX3BQ9H321 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.25□□□□□ -2.21
VCX3BQ9H321 MTND1P16-201ENST00000465177 898 ntBASIC1.25□□□□□ -2.21
VCX3BQ9H321 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.25□□□□□ -2.21
VCX3BQ9H321 AC139453.3-201ENST00000493276 369 ntBASIC1.25□□□□□ -2.21
VCX3BQ9H321 AC008549.1-201ENST00000512900 643 ntBASIC1.25□□□□□ -2.21
VCX3BQ9H321 RNA5SP445-201ENST00000515889 115 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms