Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 RN7SKP83-201ENST00000516512 178 ntBASIC4.8□□□□□ -1.64
CNTNAP3Q9BZ76 AC084851.1-201ENST00000529105 249 ntBASIC4.8□□□□□ -1.64
CNTNAP3Q9BZ76 NACAP3-201ENST00000552100 481 ntBASIC4.8□□□□□ -1.64
CNTNAP3Q9BZ76 AP000769.2-201ENST00000602344 396 ntBASIC4.8□□□□□ -1.64
CNTNAP3Q9BZ76 AC024153.1-201ENST00000603103 365 ntBASIC4.8□□□□□ -1.64
CNTNAP3Q9BZ76 AC008121.1-201ENST00000603244 268 ntBASIC4.8□□□□□ -1.64
CNTNAP3Q9BZ76 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.8□□□□□ -1.64
CNTNAP3Q9BZ76 AL161798.1-201ENST00000604630 131 ntBASIC4.8□□□□□ -1.64
CNTNAP3Q9BZ76 AC069294.1-201ENST00000608397 350 ntBASIC4.8□□□□□ -1.64
CNTNAP3Q9BZ76 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.8□□□□□ -1.64
CNTNAP3Q9BZ76 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.8□□□□□ -1.64
CNTNAP3Q9BZ76 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CNTNAP3Q9BZ76 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CNTNAP3Q9BZ76 A2MP1-204ENST00000566278 4130 ntBASIC4.79□□□□□ -1.64
CNTNAP3Q9BZ76 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.79□□□□□ -1.64
CNTNAP3Q9BZ76 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.79□□□□□ -1.64
CNTNAP3Q9BZ76 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
CNTNAP3Q9BZ76 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CNTNAP3Q9BZ76 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
CNTNAP3Q9BZ76 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CNTNAP3Q9BZ76 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.79□□□□□ -1.64
CNTNAP3Q9BZ76 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CNTNAP3Q9BZ76 AC008079.2-201ENST00000623543 20396 ntBASIC4.79□□□□□ -1.64
CNTNAP3Q9BZ76 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CNTNAP3Q9BZ76 DEFB108F-201ENST00000344638 222 ntBASIC4.79□□□□□ -1.64
CNTNAP3Q9BZ76 MIR10B-201ENST00000385011 110 ntBASIC4.79□□□□□ -1.64
CNTNAP3Q9BZ76 MIR514A1-201ENST00000385133 98 ntBASIC4.79□□□□□ -1.64
CNTNAP3Q9BZ76 MIR153-2-201ENST00000385225 87 ntBASIC4.79□□□□□ -1.64
CNTNAP3Q9BZ76 RNU6-628P-201ENST00000410675 107 ntBASIC4.79□□□□□ -1.64
CNTNAP3Q9BZ76 RNU6-1001P-201ENST00000411265 100 ntBASIC4.79□□□□□ -1.64
CNTNAP3Q9BZ76 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CNTNAP3Q9BZ76 RPL23AP49-201ENST00000492925 468 ntBASIC4.79□□□□□ -1.64
CNTNAP3Q9BZ76 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.79□□□□□ -1.64
CNTNAP3Q9BZ76 RNU6-537P-201ENST00000517277 103 ntBASIC4.79□□□□□ -1.64
CNTNAP3Q9BZ76 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.79□□□□□ -1.64
CNTNAP3Q9BZ76 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.79□□□□□ -1.64
CNTNAP3Q9BZ76 AC005868.1-201ENST00000536421 331 ntBASIC4.79□□□□□ -1.64
CNTNAP3Q9BZ76 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.79□□□□□ -1.64
CNTNAP3Q9BZ76 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.79□□□□□ -1.64
CNTNAP3Q9BZ76 MIR3200-201ENST00000580767 85 ntBASIC4.79□□□□□ -1.64
CNTNAP3Q9BZ76 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.79□□□□□ -1.64
CNTNAP3Q9BZ76 AC005296.1-201ENST00000616145 209 ntBASIC4.79□□□□□ -1.64
CNTNAP3Q9BZ76 BX005214.3-202ENST00000619809 325 ntBASIC4.79□□□□□ -1.64
CNTNAP3Q9BZ76 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.79□□□□□ -1.64
CNTNAP3Q9BZ76 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.79□□□□□ -1.64
CNTNAP3Q9BZ76 SMG1P4-204ENST00000523028 4131 ntBASIC4.79□□□□□ -1.64
CNTNAP3Q9BZ76 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CNTNAP3Q9BZ76 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
CNTNAP3Q9BZ76 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CNTNAP3Q9BZ76 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CNTNAP3Q9BZ76 SCARNA15-201ENST00000607520 4325 ntBASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 AC099654.2-201ENST00000433031 1980 ntBASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 AF127577.6-201ENST00000623352 2191 ntBASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 AP001642.1-201ENST00000624727 2117 ntBASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 AC093535.2-201ENST00000624769 2326 ntBASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 MIR450A1-201ENST00000362262 91 ntBASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 RNY1P11-201ENST00000363759 113 ntBASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 snoU2_19.4-201ENST00000364329 80 ntBASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 SNORD14B-201ENST00000364533 90 ntBASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 Y_RNA.251-201ENST00000364551 99 ntBASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 RNU6-1180P-201ENST00000364935 107 ntBASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 MIR491-201ENST00000384877 84 ntBASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 SNORA68.2-201ENST00000391263 128 ntBASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 RPS29P10-201ENST00000439197 166 ntBASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 SNORD125-201ENST00000459538 96 ntBASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 RPS20P22-201ENST00000473700 357 ntBASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 AL049874.1-201ENST00000489560 388 ntBASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 MLLT10P2-201ENST00000506434 249 ntBASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 RNU6-772P-201ENST00000516042 105 ntBASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 AC109810.1-201ENST00000534066 224 ntBASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 MIR3646-201ENST00000578301 84 ntBASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 RNA5SP108-201ENST00000605921 117 ntBASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 AC010632.3-201ENST00000611377 369 ntBASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 AL360181.4-201ENST00000621752 134 ntBASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 AL773545.4-201ENST00000637262 310 ntBASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 AL513478.4-201ENST00000641636 310 ntBASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 MAPK10-304ENST00000641341 3984 ntBASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CNTNAP3Q9BZ76 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms