| BEGAIN | Q9BUH8 | MYBPC1-208 | ENST00000547405 | 3834 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.49 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | CASC1-203 | ENST00000395987 | 2363 nt | APPRIS P3 TSL 1 (best) BASIC | 5.49 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | FLG-AS1-205 | ENST00000445097 | 2857 nt | TSL 1 (best) BASIC | 5.49 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | KIF2A-205 | ENST00000506857 | 2219 nt | TSL 2 BASIC | 5.48 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | LZTFL1-216 | ENST00000539217 | 4113 nt | TSL 2 BASIC | 5.48 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | ATF7IP2-202 | ENST00000356427 | 3463 nt | APPRIS P1 TSL 1 (best) BASIC | 5.48 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | RNA5SP283-201 | ENST00000365604 | 119 nt | BASIC | 5.48 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | Z98749.2-208 | ENST00000381646 | 500 nt | BASIC | 5.48 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | MIR449B-201 | ENST00000384995 | 97 nt | BASIC | 5.48 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | HMGN2P27-201 | ENST00000427352 | 270 nt | BASIC | 5.48 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | RPL21P104-201 | ENST00000464143 | 478 nt | BASIC | 5.48 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | RPL26P26-201 | ENST00000480251 | 434 nt | BASIC | 5.48 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | BTF3L4P4-201 | ENST00000506381 | 449 nt | BASIC | 5.48 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | AC093534.2-201 | ENST00000511418 | 420 nt | TSL 3 BASIC | 5.48 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | AC090281.1-201 | ENST00000523019 | 276 nt | BASIC | 5.48 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | AC084365.1-201 | ENST00000552470 | 310 nt | TSL 3 BASIC | 5.48 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | AC011921.3-201 | ENST00000605540 | 361 nt | BASIC | 5.48 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | AL590240.4-201 | ENST00000616908 | 390 nt | BASIC | 5.48 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | SCN1A-202 | ENST00000375405 | 8097 nt | APPRIS P3 TSL 5 BASIC | 5.48 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | NOSTRIN-206 | ENST00000444448 | 2537 nt | TSL 5 BASIC | 5.48 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | ADNP-201 | ENST00000349014 | 5963 nt | APPRIS P1 TSL 1 (best) BASIC | 5.48 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | AKAP4-201 | ENST00000358526 | 2881 nt | TSL 1 (best) BASIC | 5.48 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | ABCC13-202 | ENST00000463099 | 3842 nt | BASIC | 5.47 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | ABI3BP-215 | ENST00000495063 | 3714 nt | TSL 1 (best) BASIC | 5.47 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | RPAP3-202 | ENST00000380650 | 2149 nt | TSL 1 (best) BASIC | 5.47 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | UBE4A-203 | ENST00000545354 | 2149 nt | TSL 2 BASIC | 5.47 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | TAB3-204 | ENST00000378932 | 3698 nt | TSL 1 (best) BASIC | 5.47 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | SLCO1A2-201 | ENST00000307378 | 7682 nt | APPRIS P1 TSL 1 (best) BASIC | 5.47 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | UBE2WP1-201 | ENST00000362030 | 340 nt | BASIC | 5.47 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | RNU6-942P-201 | ENST00000363002 | 107 nt | BASIC | 5.47 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | RNU6-626P-201 | ENST00000363354 | 107 nt | BASIC | 5.47 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | RNA5SP513-201 | ENST00000364648 | 118 nt | BASIC | 5.47 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | Y_RNA.319-201 | ENST00000365138 | 92 nt | BASIC | 5.47 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | U3.15-201 | ENST00000365398 | 212 nt | BASIC | 5.47 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | MIR518D-201 | ENST00000385014 | 87 nt | BASIC | 5.47 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | AL357515.1-201 | ENST00000402967 | 542 nt | BASIC | 5.47 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | MTHFD2P2-201 | ENST00000407725 | 247 nt | BASIC | 5.47 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | AC121342.1-201 | ENST00000423914 | 550 nt | TSL 3 BASIC | 5.47 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | LINC00375-201 | ENST00000433074 | 601 nt | TSL 5 BASIC | 5.47 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | ATP2B2-IT1-201 | ENST00000440152 | 472 nt | TSL 3 BASIC | 5.47 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | AC013727.2-201 | ENST00000447761 | 545 nt | TSL 4 BASIC | 5.47 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | AC091021.1-201 | ENST00000468051 | 388 nt | BASIC | 5.47 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | RN7SL441P-201 | ENST00000492388 | 296 nt | BASIC | 5.47 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | RNU6-1198P-201 | ENST00000516904 | 67 nt | BASIC | 5.47 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | AC027288.2-201 | ENST00000553028 | 243 nt | BASIC | 5.47 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | H3F3AP1-201 | ENST00000559984 | 334 nt | BASIC | 5.47 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | MIR5699-201 | ENST00000578903 | 90 nt | BASIC | 5.47 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | AC004832.4-201 | ENST00000608952 | 331 nt | BASIC | 5.47 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | U3.53-201 | ENST00000628922 | 216 nt | BASIC | 5.47 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | MARK2P15-201 | ENST00000432204 | 2186 nt | BASIC | 5.47 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | FAT3-201 | ENST00000409404 | 19030 nt | APPRIS P1 TSL 5 BASIC | 5.47 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | CDH9-201 | ENST00000231021 | 3079 nt | APPRIS P1 TSL 1 (best) BASIC | 5.47 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | LINGO2-201 | ENST00000308675 | 3031 nt | APPRIS P1 TSL 5 BASIC | 5.47 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | LINC00630-205 | ENST00000440496 | 2101 nt | TSL 1 (best) BASIC | 5.47 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | TJP1-209 | ENST00000545208 | 5007 nt | APPRIS ALT2 TSL 5 BASIC | 5.47 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | CTAGE5-210 | ENST00000553728 | 4392 nt | APPRIS ALT2 TSL 5 BASIC | 5.46 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | AL359854.1-201 | ENST00000614203 | 1594 nt | BASIC | 5.46 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | OR4F5-202 | ENST00000641515 | 2618 nt | APPRIS P1 BASIC | 5.46 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | HEATR5A-203 | ENST00000543095 | 7840 nt | APPRIS P1 TSL 5 BASIC | 5.46 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | AL079305.1-201 | ENST00000623159 | 3008 nt | BASIC | 5.46 | □□□□□ -1.53 | | |
| BEGAIN | Q9BUH8 | BX088651.2-201 | ENST00000425493 | 3614 nt | TSL 2 BASIC | 5.46 | □□□□□ -1.54 | | |
| BEGAIN | Q9BUH8 | ANO3-202 | ENST00000525139 | 3257 nt | APPRIS ALT1 TSL 5 BASIC | 5.46 | □□□□□ -1.54 | | |
| BEGAIN | Q9BUH8 | MGAT4C-211 | ENST00000621808 | 2582 nt | APPRIS P1 TSL 1 (best) BASIC | 5.46 | □□□□□ -1.54 | | |
| BEGAIN | Q9BUH8 | KYAT3-203 | ENST00000370491 | 1868 nt | APPRIS ALT1 TSL 2 BASIC | 5.46 | □□□□□ -1.54 | | |
| BEGAIN | Q9BUH8 | MIR410-201 | ENST00000362222 | 80 nt | BASIC | 5.46 | □□□□□ -1.54 | | |
| BEGAIN | Q9BUH8 | MIR383-201 | ENST00000362257 | 73 nt | BASIC | 5.46 | □□□□□ -1.54 | | |
| BEGAIN | Q9BUH8 | RNU5B-2P-201 | ENST00000363036 | 113 nt | BASIC | 5.46 | □□□□□ -1.54 | | |
| BEGAIN | Q9BUH8 | Y_RNA.230-201 | ENST00000364348 | 109 nt | BASIC | 5.46 | □□□□□ -1.54 | | |
| BEGAIN | Q9BUH8 | Y_RNA.233-201 | ENST00000364407 | 101 nt | BASIC | 5.46 | □□□□□ -1.54 | | |
| BEGAIN | Q9BUH8 | RNU6-281P-201 | ENST00000384212 | 103 nt | BASIC | 5.46 | □□□□□ -1.54 | | |
| BEGAIN | Q9BUH8 | RNU6-658P-201 | ENST00000384606 | 106 nt | BASIC | 5.46 | □□□□□ -1.54 | | |
| BEGAIN | Q9BUH8 | Y_RNA.570-201 | ENST00000384750 | 101 nt | BASIC | 5.46 | □□□□□ -1.54 | | |
| BEGAIN | Q9BUH8 | MIR10B-201 | ENST00000385011 | 110 nt | BASIC | 5.46 | □□□□□ -1.54 | | |
| BEGAIN | Q9BUH8 | MIR634-201 | ENST00000385208 | 97 nt | BASIC | 5.46 | □□□□□ -1.54 | | |
| BEGAIN | Q9BUH8 | RNU1-82P-201 | ENST00000390851 | 165 nt | BASIC | 5.46 | □□□□□ -1.54 | | |
| BEGAIN | Q9BUH8 | MAMDC2-AS1-203 | ENST00000420573 | 339 nt | TSL 3 BASIC | 5.46 | □□□□□ -1.54 | | |
| BEGAIN | Q9BUH8 | AP003025.1-201 | ENST00000421650 | 149 nt | TSL 1 (best) BASIC | 5.46 | □□□□□ -1.54 | | |
| BEGAIN | Q9BUH8 | RPL23AP95-201 | ENST00000426806 | 265 nt | BASIC | 5.46 | □□□□□ -1.54 | | |
| BEGAIN | Q9BUH8 | AC004875.1-201 | ENST00000432702 | 378 nt | TSL 3 BASIC | 5.46 | □□□□□ -1.54 | | |
| BEGAIN | Q9BUH8 | AL442638.1-201 | ENST00000443359 | 237 nt | TSL 5 BASIC | 5.46 | □□□□□ -1.54 | | |
| BEGAIN | Q9BUH8 | AC007395.1-201 | ENST00000451333 | 677 nt | BASIC | 5.46 | □□□□□ -1.54 | | |
| BEGAIN | Q9BUH8 | RN7SL814P-201 | ENST00000487715 | 300 nt | BASIC | 5.46 | □□□□□ -1.54 | | |
| BEGAIN | Q9BUH8 | AC091874.1-201 | ENST00000511402 | 339 nt | BASIC | 5.46 | □□□□□ -1.54 | | |
| BEGAIN | Q9BUH8 | RNU1-103P-201 | ENST00000516502 | 125 nt | BASIC | 5.46 | □□□□□ -1.54 | | |
| BEGAIN | Q9BUH8 | AC087341.1-201 | ENST00000521490 | 491 nt | TSL 2 BASIC | 5.46 | □□□□□ -1.54 | | |
| BEGAIN | Q9BUH8 | AC002428.2-201 | ENST00000522973 | 414 nt | TSL 3 BASIC | 5.46 | □□□□□ -1.54 | | |
| BEGAIN | Q9BUH8 | AF099810.1-201 | ENST00000554219 | 525 nt | TSL 3 BASIC | 5.46 | □□□□□ -1.54 | | |
| BEGAIN | Q9BUH8 | AC243829.5-201 | ENST00000578447 | 247 nt | TSL 5 BASIC | 5.46 | □□□□□ -1.54 | | |
| BEGAIN | Q9BUH8 | MIR5695-201 | ENST00000579717 | 85 nt | BASIC | 5.46 | □□□□□ -1.54 | | |
| BEGAIN | Q9BUH8 | MIR4660-201 | ENST00000583549 | 74 nt | BASIC | 5.46 | □□□□□ -1.54 | | |
| BEGAIN | Q9BUH8 | AC108738.1-201 | ENST00000603703 | 237 nt | BASIC | 5.46 | □□□□□ -1.54 | | |
| BEGAIN | Q9BUH8 | AL138963.2-201 | ENST00000605137 | 226 nt | BASIC | 5.46 | □□□□□ -1.54 | | |
| BEGAIN | Q9BUH8 | MANEA-201 | ENST00000358812 | 4575 nt | APPRIS P1 TSL 1 (best) BASIC | 5.46 | □□□□□ -1.54 | | |
| BEGAIN | Q9BUH8 | MEG8-223 | ENST00000638012 | 3757 nt | TSL 5 BASIC | 5.46 | □□□□□ -1.54 | | |
| BEGAIN | Q9BUH8 | AJ009632.2-204 | ENST00000635621 | 1401 nt | TSL 5 BASIC | 5.46 | □□□□□ -1.54 | | |
| BEGAIN | Q9BUH8 | NAV2-AS5-201 | ENST00000528726 | 3307 nt | TSL 1 (best) BASIC | 5.46 | □□□□□ -1.54 | | |
| BEGAIN | Q9BUH8 | USP8-201 | ENST00000307179 | 4243 nt | APPRIS P1 TSL 1 (best) BASIC | 5.46 | □□□□□ -1.54 | | |
| BEGAIN | Q9BUH8 | SLC2A2-201 | ENST00000314251 | 3210 nt | APPRIS P1 TSL 1 (best) BASIC | 5.46 | □□□□□ -1.54 | | |
| BEGAIN | Q9BUH8 | SCN2A-201 | ENST00000283256 | 8660 nt | APPRIS P5 TSL 1 (best) BASIC | 5.45 | □□□□□ -1.54 | | |
| BEGAIN | Q9BUH8 | AC010132.3-201 | ENST00000442788 | 2430 nt | APPRIS P5 TSL 5 BASIC | 5.45 | □□□□□ -1.54 | | |