Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 SNORD115-30-201ENST00000364117 82 ntBASIC4.9□□□□□ -1.63
USB1Q9BQ65 RN7SKP280-201ENST00000364196 304 ntBASIC4.9□□□□□ -1.63
USB1Q9BQ65 RNU6-147P-201ENST00000383983 107 ntBASIC4.9□□□□□ -1.63
USB1Q9BQ65 U3.26-201ENST00000391236 204 ntBASIC4.9□□□□□ -1.63
USB1Q9BQ65 AC009804.1-201ENST00000400949 179 ntBASIC4.9□□□□□ -1.63
USB1Q9BQ65 MIR208B-201ENST00000401172 77 ntBASIC4.9□□□□□ -1.63
USB1Q9BQ65 RNA5SP390-201ENST00000410191 113 ntBASIC4.9□□□□□ -1.63
USB1Q9BQ65 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.9□□□□□ -1.63
USB1Q9BQ65 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.9□□□□□ -1.63
USB1Q9BQ65 RPS27P1-201ENST00000450552 247 ntBASIC4.9□□□□□ -1.63
USB1Q9BQ65 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
USB1Q9BQ65 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
USB1Q9BQ65 RNA5SP103-201ENST00000459503 118 ntBASIC4.9□□□□□ -1.63
USB1Q9BQ65 RNA5SP362-201ENST00000516048 118 ntBASIC4.9□□□□□ -1.63
USB1Q9BQ65 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.9□□□□□ -1.63
USB1Q9BQ65 MIR5688-201ENST00000580619 83 ntBASIC4.9□□□□□ -1.63
USB1Q9BQ65 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.9□□□□□ -1.63
USB1Q9BQ65 AL451007.1-201ENST00000595491 289 ntBASIC4.9□□□□□ -1.63
USB1Q9BQ65 AC012616.1-201ENST00000600294 197 ntBASIC4.9□□□□□ -1.63
USB1Q9BQ65 AL445567.2-201ENST00000618935 498 ntBASIC4.9□□□□□ -1.63
USB1Q9BQ65 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.9□□□□□ -1.63
USB1Q9BQ65 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
USB1Q9BQ65 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
USB1Q9BQ65 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
USB1Q9BQ65 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
USB1Q9BQ65 OR4F13P-202ENST00000560066 2054 ntBASIC4.9□□□□□ -1.63
USB1Q9BQ65 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
USB1Q9BQ65 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
USB1Q9BQ65 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
USB1Q9BQ65 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
USB1Q9BQ65 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
USB1Q9BQ65 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
USB1Q9BQ65 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
USB1Q9BQ65 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
USB1Q9BQ65 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
USB1Q9BQ65 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
USB1Q9BQ65 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.89□□□□□ -1.63
USB1Q9BQ65 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
USB1Q9BQ65 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.89□□□□□ -1.63
USB1Q9BQ65 RN7SKP145-201ENST00000363291 303 ntBASIC4.89□□□□□ -1.63
USB1Q9BQ65 RNU6-1205P-201ENST00000363625 106 ntBASIC4.89□□□□□ -1.63
USB1Q9BQ65 RNU6-915P-201ENST00000364943 103 ntBASIC4.89□□□□□ -1.63
USB1Q9BQ65 RNA5SP91-201ENST00000390902 119 ntBASIC4.89□□□□□ -1.63
USB1Q9BQ65 MIR1286-201ENST00000408112 78 ntBASIC4.89□□□□□ -1.63
USB1Q9BQ65 BX510359.2-201ENST00000417920 305 ntBASIC4.89□□□□□ -1.63
USB1Q9BQ65 AL049745.1-201ENST00000433953 286 ntBASIC4.89□□□□□ -1.63
USB1Q9BQ65 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.89□□□□□ -1.63
USB1Q9BQ65 RPL31P41-201ENST00000477967 372 ntBASIC4.89□□□□□ -1.63
USB1Q9BQ65 AC103975.1-201ENST00000482506 483 ntBASIC4.89□□□□□ -1.63
USB1Q9BQ65 RPL30P5-201ENST00000494923 336 ntBASIC4.89□□□□□ -1.63
USB1Q9BQ65 RNU6-561P-201ENST00000516222 102 ntBASIC4.89□□□□□ -1.63
USB1Q9BQ65 RNA5SP360-201ENST00000516555 118 ntBASIC4.89□□□□□ -1.63
USB1Q9BQ65 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.89□□□□□ -1.63
USB1Q9BQ65 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.89□□□□□ -1.63
USB1Q9BQ65 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.89□□□□□ -1.63
USB1Q9BQ65 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.89□□□□□ -1.63
USB1Q9BQ65 AL162713.1-201ENST00000604480 262 ntBASIC4.89□□□□□ -1.63
USB1Q9BQ65 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.89□□□□□ -1.63
USB1Q9BQ65 AL773545.4-201ENST00000637262 310 ntBASIC4.89□□□□□ -1.63
USB1Q9BQ65 AL513478.4-201ENST00000641636 310 ntBASIC4.89□□□□□ -1.63
USB1Q9BQ65 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.89□□□□□ -1.63
USB1Q9BQ65 AC025031.4-201ENST00000621248 3271 ntBASIC4.89□□□□□ -1.63
USB1Q9BQ65 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
USB1Q9BQ65 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
USB1Q9BQ65 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.89□□□□□ -1.63
USB1Q9BQ65 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
USB1Q9BQ65 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
USB1Q9BQ65 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
USB1Q9BQ65 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
USB1Q9BQ65 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
USB1Q9BQ65 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
USB1Q9BQ65 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
USB1Q9BQ65 AC106871.1-201ENST00000568324 3102 ntBASIC4.88□□□□□ -1.63
USB1Q9BQ65 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
USB1Q9BQ65 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
USB1Q9BQ65 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
USB1Q9BQ65 RNU6-728P-201ENST00000365375 104 ntBASIC4.88□□□□□ -1.63
USB1Q9BQ65 Y_RNA.368-201ENST00000365547 113 ntBASIC4.88□□□□□ -1.63
USB1Q9BQ65 UBBP2-201ENST00000376781 231 ntBASIC4.88□□□□□ -1.63
USB1Q9BQ65 Y_RNA.393-201ENST00000383936 102 ntBASIC4.88□□□□□ -1.63
USB1Q9BQ65 RNU6-1228P-201ENST00000391014 107 ntBASIC4.88□□□□□ -1.63
USB1Q9BQ65 RPL21P17-201ENST00000397467 475 ntBASIC4.88□□□□□ -1.63
USB1Q9BQ65 AL606845.1-201ENST00000404881 255 ntBASIC4.88□□□□□ -1.63
USB1Q9BQ65 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.88□□□□□ -1.63
USB1Q9BQ65 RN7SL197P-201ENST00000466981 299 ntBASIC4.88□□□□□ -1.63
USB1Q9BQ65 ENPP7P11-201ENST00000505915 627 ntBASIC4.88□□□□□ -1.63
USB1Q9BQ65 RNU6-581P-201ENST00000516214 105 ntBASIC4.88□□□□□ -1.63
USB1Q9BQ65 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.88□□□□□ -1.63
USB1Q9BQ65 AC009962.1-201ENST00000567327 3813 ntBASIC4.88□□□□□ -1.63
USB1Q9BQ65 AC090897.2-201ENST00000581715 130 ntBASIC4.88□□□□□ -1.63
USB1Q9BQ65 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.88□□□□□ -1.63
USB1Q9BQ65 AC011471.1-201ENST00000585766 187 ntBASIC4.88□□□□□ -1.63
USB1Q9BQ65 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.88□□□□□ -1.63
USB1Q9BQ65 AC100827.5-201ENST00000615883 426 ntBASIC4.88□□□□□ -1.63
USB1Q9BQ65 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
USB1Q9BQ65 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
USB1Q9BQ65 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
USB1Q9BQ65 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
USB1Q9BQ65 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
USB1Q9BQ65 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms