Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 AC008571.1-201ENST00000467232 300 ntBASIC2.68□□□□□ -1.98
CPNE1Q99829 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.68□□□□□ -1.98
CPNE1Q99829 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.68□□□□□ -1.98
CPNE1Q99829 AC107401.1-201ENST00000503426 685 ntBASIC2.68□□□□□ -1.98
CPNE1Q99829 AC098799.2-201ENST00000509466 868 ntBASIC2.68□□□□□ -1.98
CPNE1Q99829 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CPNE1Q99829 GLYCAM1-201ENST00000546596 285 ntBASIC2.68□□□□□ -1.98
CPNE1Q99829 AC234778.2-201ENST00000566241 354 ntBASIC2.68□□□□□ -1.98
CPNE1Q99829 MIR4635-201ENST00000583759 79 ntBASIC2.68□□□□□ -1.98
CPNE1Q99829 AL391813.1-201ENST00000603098 260 ntBASIC2.68□□□□□ -1.98
CPNE1Q99829 AC012507.3-201ENST00000603556 477 ntBASIC2.68□□□□□ -1.98
CPNE1Q99829 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CPNE1Q99829 OR5AK4P-201ENST00000635912 903 ntBASIC2.68□□□□□ -1.98
CPNE1Q99829 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.68□□□□□ -1.98
CPNE1Q99829 AC004944.1-201ENST00000517807 3059 ntBASIC2.67□□□□□ -1.98
CPNE1Q99829 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.67□□□□□ -1.98
CPNE1Q99829 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
CPNE1Q99829 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.67□□□□□ -1.98
CPNE1Q99829 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CPNE1Q99829 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CPNE1Q99829 RNU6-898P-201ENST00000365627 104 ntBASIC2.67□□□□□ -1.98
CPNE1Q99829 SNORA18.3-201ENST00000384122 132 ntBASIC2.67□□□□□ -1.98
CPNE1Q99829 RNA5SP21-201ENST00000410917 96 ntBASIC2.67□□□□□ -1.98
CPNE1Q99829 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.67□□□□□ -1.98
CPNE1Q99829 MTCO3P30-201ENST00000426425 670 ntBASIC2.67□□□□□ -1.98
CPNE1Q99829 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.67□□□□□ -1.98
CPNE1Q99829 AL627311.1-201ENST00000431514 115 ntBASIC2.67□□□□□ -1.98
CPNE1Q99829 DNAJC19P4-201ENST00000440115 345 ntBASIC2.67□□□□□ -1.98
CPNE1Q99829 AC009296.1-201ENST00000443146 155 ntBASIC2.67□□□□□ -1.98
CPNE1Q99829 AL360271.2-201ENST00000447710 161 ntBASIC2.67□□□□□ -1.98
CPNE1Q99829 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CPNE1Q99829 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.67□□□□□ -1.98
CPNE1Q99829 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.67□□□□□ -1.98
CPNE1Q99829 RNU7-63P-201ENST00000459054 62 ntBASIC2.67□□□□□ -1.98
CPNE1Q99829 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.67□□□□□ -1.98
CPNE1Q99829 HMGB1P30-201ENST00000492455 606 ntBASIC2.67□□□□□ -1.98
CPNE1Q99829 FAM92A1P2-202ENST00000504766 877 ntBASIC2.67□□□□□ -1.98
CPNE1Q99829 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.67□□□□□ -1.98
CPNE1Q99829 HIGD1AP13-201ENST00000509878 289 ntBASIC2.67□□□□□ -1.98
CPNE1Q99829 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.67□□□□□ -1.98
CPNE1Q99829 AP003034.1-201ENST00000534621 422 ntBASIC2.67□□□□□ -1.98
CPNE1Q99829 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.67□□□□□ -1.98
CPNE1Q99829 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.67□□□□□ -1.98
CPNE1Q99829 AC005261.5-201ENST00000596280 355 ntBASIC2.67□□□□□ -1.98
CPNE1Q99829 AL136363.2-201ENST00000604173 851 ntBASIC2.67□□□□□ -1.98
CPNE1Q99829 AC087045.1-201ENST00000605856 382 ntBASIC2.67□□□□□ -1.98
CPNE1Q99829 AL162274.2-201ENST00000614406 332 ntBASIC2.67□□□□□ -1.98
CPNE1Q99829 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
CPNE1Q99829 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CPNE1Q99829 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.66□□□□□ -1.98
CPNE1Q99829 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CPNE1Q99829 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CPNE1Q99829 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CPNE1Q99829 SNORD3E-201ENST00000362899 217 ntBASIC2.66□□□□□ -1.98
CPNE1Q99829 Y_RNA.517-201ENST00000384551 106 ntBASIC2.66□□□□□ -1.98
CPNE1Q99829 MIR518D-201ENST00000385014 87 ntBASIC2.66□□□□□ -1.98
CPNE1Q99829 SNORA48.7-201ENST00000391302 135 ntBASIC2.66□□□□□ -1.98
CPNE1Q99829 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CPNE1Q99829 RNU2-29P-201ENST00000410423 189 ntBASIC2.66□□□□□ -1.98
CPNE1Q99829 RPL21P90-201ENST00000415692 466 ntBASIC2.66□□□□□ -1.98
CPNE1Q99829 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.66□□□□□ -1.98
CPNE1Q99829 AL513477.1-202ENST00000417061 214 ntBASIC2.66□□□□□ -1.98
CPNE1Q99829 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.66□□□□□ -1.98
CPNE1Q99829 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.66□□□□□ -1.98
CPNE1Q99829 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.66□□□□□ -1.98
CPNE1Q99829 AC092001.1-201ENST00000453012 261 ntBASIC2.66□□□□□ -1.98
CPNE1Q99829 RPS3AP14-201ENST00000483907 780 ntBASIC2.66□□□□□ -1.98
CPNE1Q99829 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.66□□□□□ -1.98
CPNE1Q99829 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.66□□□□□ -1.98
CPNE1Q99829 AC104136.1-201ENST00000512969 394 ntBASIC2.66□□□□□ -1.98
CPNE1Q99829 SCARNA11.3-201ENST00000517276 130 ntBASIC2.66□□□□□ -1.98
CPNE1Q99829 AC135279.1-201ENST00000543493 504 ntBASIC2.66□□□□□ -1.98
CPNE1Q99829 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.66□□□□□ -1.98
CPNE1Q99829 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.66□□□□□ -1.98
CPNE1Q99829 MIR4325-201ENST00000583049 90 ntBASIC2.66□□□□□ -1.98
CPNE1Q99829 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.66□□□□□ -1.98
CPNE1Q99829 AC091152.3-201ENST00000604227 325 ntBASIC2.66□□□□□ -1.98
CPNE1Q99829 AC017083.3-201ENST00000609955 700 ntBASIC2.66□□□□□ -1.98
CPNE1Q99829 AC015540.1-201ENST00000615828 501 ntBASIC2.66□□□□□ -1.98
CPNE1Q99829 AL158209.2-201ENST00000619266 216 ntBASIC2.66□□□□□ -1.98
CPNE1Q99829 MIR6863-201ENST00000636112 90 ntBASIC2.66□□□□□ -1.98
CPNE1Q99829 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.66□□□□□ -1.98
CPNE1Q99829 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
CPNE1Q99829 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
CPNE1Q99829 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CPNE1Q99829 OR4G2P-201ENST00000328113 903 ntBASIC2.65□□□□□ -1.99
CPNE1Q99829 SNORD14B-201ENST00000364533 90 ntBASIC2.65□□□□□ -1.99
CPNE1Q99829 SNORA68.1-201ENST00000364537 132 ntBASIC2.65□□□□□ -1.99
CPNE1Q99829 RNU6-1280P-201ENST00000365211 107 ntBASIC2.65□□□□□ -1.99
CPNE1Q99829 RNU6-19P-201ENST00000384718 107 ntBASIC2.65□□□□□ -1.99
CPNE1Q99829 MIR34A-201ENST00000385130 110 ntBASIC2.65□□□□□ -1.99
CPNE1Q99829 RNA5SP171-201ENST00000391071 115 ntBASIC2.65□□□□□ -1.99
CPNE1Q99829 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CPNE1Q99829 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CPNE1Q99829 RNA5SP492-201ENST00000411330 114 ntBASIC2.65□□□□□ -1.99
CPNE1Q99829 RPL19P1-201ENST00000411635 428 ntBASIC2.65□□□□□ -1.99
CPNE1Q99829 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.65□□□□□ -1.99
CPNE1Q99829 AL592148.1-201ENST00000413568 445 ntBASIC2.65□□□□□ -1.99
CPNE1Q99829 AL353193.1-201ENST00000421444 268 ntBASIC2.65□□□□□ -1.99
CPNE1Q99829 PTGES3P4-201ENST00000426243 356 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms