Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.65□□□□□ -2.15
VAT1Q99536 AC005296.1-201ENST00000616145 209 ntBASIC1.65□□□□□ -2.15
VAT1Q99536 AC008555.8-201ENST00000623602 2168 ntBASIC1.65□□□□□ -2.15
VAT1Q99536 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
VAT1Q99536 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.64□□□□□ -2.15
VAT1Q99536 SNORA25B-201ENST00000365507 128 ntBASIC1.64□□□□□ -2.15
VAT1Q99536 RNU6-898P-201ENST00000365627 104 ntBASIC1.64□□□□□ -2.15
VAT1Q99536 Y_RNA.465-201ENST00000384293 102 ntBASIC1.64□□□□□ -2.15
VAT1Q99536 U8.14-201ENST00000390843 143 ntBASIC1.64□□□□□ -2.15
VAT1Q99536 MIR1302-8-201ENST00000408342 128 ntBASIC1.64□□□□□ -2.15
VAT1Q99536 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.64□□□□□ -2.15
VAT1Q99536 BX510359.4-201ENST00000423750 193 ntBASIC1.64□□□□□ -2.15
VAT1Q99536 AL353689.1-201ENST00000438895 199 ntBASIC1.64□□□□□ -2.15
VAT1Q99536 MTCO1P53-201ENST00000441633 699 ntBASIC1.64□□□□□ -2.15
VAT1Q99536 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.64□□□□□ -2.15
VAT1Q99536 snoU13.26-201ENST00000459452 105 ntBASIC1.64□□□□□ -2.15
VAT1Q99536 AC023194.1-201ENST00000493084 308 ntBASIC1.64□□□□□ -2.15
VAT1Q99536 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
VAT1Q99536 RNU6-572P-201ENST00000516724 80 ntBASIC1.64□□□□□ -2.15
VAT1Q99536 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.64□□□□□ -2.15
VAT1Q99536 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.64□□□□□ -2.15
VAT1Q99536 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.64□□□□□ -2.15
VAT1Q99536 MIR4299-201ENST00000577899 72 ntBASIC1.64□□□□□ -2.15
VAT1Q99536 BNIP3P9-201ENST00000603714 553 ntBASIC1.64□□□□□ -2.15
VAT1Q99536 AL358072.1-201ENST00000604156 575 ntBASIC1.64□□□□□ -2.15
VAT1Q99536 AC097468.3-201ENST00000607956 456 ntBASIC1.64□□□□□ -2.15
VAT1Q99536 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.64□□□□□ -2.15
VAT1Q99536 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.64□□□□□ -2.15
VAT1Q99536 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.64□□□□□ -2.15
VAT1Q99536 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.64□□□□□ -2.15
VAT1Q99536 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.64□□□□□ -2.15
VAT1Q99536 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
VAT1Q99536 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.63□□□□□ -2.15
VAT1Q99536 MIR518D-201ENST00000385014 87 ntBASIC1.63□□□□□ -2.15
VAT1Q99536 MIR561-201ENST00000385216 97 ntBASIC1.63□□□□□ -2.15
VAT1Q99536 AL591034.2-201ENST00000402839 359 ntBASIC1.63□□□□□ -2.15
VAT1Q99536 RNA5SP450-201ENST00000411206 102 ntBASIC1.63□□□□□ -2.15
VAT1Q99536 AC127391.1-201ENST00000411737 98 ntBASIC1.63□□□□□ -2.15
VAT1Q99536 MTATP6P20-201ENST00000414147 562 ntBASIC1.63□□□□□ -2.15
VAT1Q99536 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.63□□□□□ -2.15
VAT1Q99536 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.63□□□□□ -2.15
VAT1Q99536 XKRYP1-201ENST00000423438 492 ntBASIC1.63□□□□□ -2.15
VAT1Q99536 XKRYP2-201ENST00000432915 492 ntBASIC1.63□□□□□ -2.15
VAT1Q99536 EEF1A1P39-201ENST00000440791 250 ntBASIC1.63□□□□□ -2.15
VAT1Q99536 MTND4P25-201ENST00000441039 533 ntBASIC1.63□□□□□ -2.15
VAT1Q99536 NEFMP1-201ENST00000443423 1006 ntBASIC1.63□□□□□ -2.15
VAT1Q99536 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.63□□□□□ -2.15
VAT1Q99536 RPL7P43-201ENST00000478876 753 ntBASIC1.63□□□□□ -2.15
VAT1Q99536 AC116337.1-201ENST00000509680 687 ntBASIC1.63□□□□□ -2.15
VAT1Q99536 RNU5B-3P-201ENST00000516601 115 ntBASIC1.63□□□□□ -2.15
VAT1Q99536 SNORA31.23-201ENST00000517219 133 ntBASIC1.63□□□□□ -2.15
VAT1Q99536 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.63□□□□□ -2.15
VAT1Q99536 MTND1P36-201ENST00000522384 936 ntBASIC1.63□□□□□ -2.15
VAT1Q99536 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.63□□□□□ -2.15
VAT1Q99536 RPS3AP4-201ENST00000555161 764 ntBASIC1.63□□□□□ -2.15
VAT1Q99536 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
VAT1Q99536 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC1.63□□□□□ -2.15
VAT1Q99536 AC007363.1-201ENST00000604736 620 ntBASIC1.63□□□□□ -2.15
VAT1Q99536 NDUFA8P1-201ENST00000605525 367 ntBASIC1.63□□□□□ -2.15
VAT1Q99536 AC092953.2-201ENST00000608000 699 ntBASIC1.63□□□□□ -2.15
VAT1Q99536 AC068944.2-201ENST00000610373 403 ntBASIC1.63□□□□□ -2.15
VAT1Q99536 uc_338.5-201ENST00000611839 155 ntBASIC1.63□□□□□ -2.15
VAT1Q99536 AL138960.2-201ENST00000625145 535 ntBASIC1.63□□□□□ -2.15
VAT1Q99536 AC099654.8-201ENST00000637757 681 ntBASIC1.63□□□□□ -2.15
VAT1Q99536 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.63□□□□□ -2.15
VAT1Q99536 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
VAT1Q99536 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
VAT1Q99536 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
VAT1Q99536 AP000776.1-201ENST00000530032 1663 ntBASIC1.62□□□□□ -2.15
VAT1Q99536 AC006026.1-201ENST00000444025 1803 ntBASIC1.62□□□□□ -2.15
VAT1Q99536 RNU6-288P-201ENST00000363690 104 ntBASIC1.62□□□□□ -2.15
VAT1Q99536 RNU5A-8P-201ENST00000364102 114 ntBASIC1.62□□□□□ -2.15
VAT1Q99536 RNU6-234P-201ENST00000365229 104 ntBASIC1.62□□□□□ -2.15
VAT1Q99536 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
VAT1Q99536 MIR1305-201ENST00000408300 86 ntBASIC1.62□□□□□ -2.15
VAT1Q99536 AC078974.1-201ENST00000411597 223 ntBASIC1.62□□□□□ -2.15
VAT1Q99536 RPS3AP37-201ENST00000419176 745 ntBASIC1.62□□□□□ -2.15
VAT1Q99536 DNAJC19P4-201ENST00000440115 345 ntBASIC1.62□□□□□ -2.15
VAT1Q99536 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.62□□□□□ -2.15
VAT1Q99536 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.62□□□□□ -2.15
VAT1Q99536 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.62□□□□□ -2.15
VAT1Q99536 HMGB1P35-201ENST00000503360 598 ntBASIC1.62□□□□□ -2.15
VAT1Q99536 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.62□□□□□ -2.15
VAT1Q99536 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.62□□□□□ -2.15
VAT1Q99536 AC010587.2-201ENST00000511727 448 ntBASIC1.62□□□□□ -2.15
VAT1Q99536 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
VAT1Q99536 MTCYBP43-201ENST00000513621 740 ntBASIC1.62□□□□□ -2.15
VAT1Q99536 RNU6-143P-201ENST00000516942 93 ntBASIC1.62□□□□□ -2.15
VAT1Q99536 SNORA48.11-201ENST00000517015 89 ntBASIC1.62□□□□□ -2.15
VAT1Q99536 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.62□□□□□ -2.15
VAT1Q99536 AP000907.2-201ENST00000530827 353 ntBASIC1.62□□□□□ -2.15
VAT1Q99536 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.62□□□□□ -2.15
VAT1Q99536 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
VAT1Q99536 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.62□□□□□ -2.15
VAT1Q99536 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
VAT1Q99536 AL158827.2-201ENST00000602494 330 ntBASIC1.62□□□□□ -2.15
VAT1Q99536 RNU6-88P-201ENST00000606801 100 ntBASIC1.62□□□□□ -2.15
VAT1Q99536 AL355472.4-201ENST00000610233 626 ntBASIC1.62□□□□□ -2.15
VAT1Q99536 MIR8081-201ENST00000611533 95 ntBASIC1.62□□□□□ -2.15
VAT1Q99536 AL691447.3-201ENST00000635020 330 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms