Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.13□□□□□ -2.23
LYSMD1Q96S90 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.13□□□□□ -2.23
LYSMD1Q96S90 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.13□□□□□ -2.23
LYSMD1Q96S90 RNU6-927P-201ENST00000516199 100 ntBASIC1.13□□□□□ -2.23
LYSMD1Q96S90 RNU6-703P-201ENST00000516946 107 ntBASIC1.13□□□□□ -2.23
LYSMD1Q96S90 AP003497.1-201ENST00000528472 562 ntBASIC1.13□□□□□ -2.23
LYSMD1Q96S90 ADAM3B-201ENST00000569937 840 ntBASIC1.13□□□□□ -2.23
LYSMD1Q96S90 AC073544.2-201ENST00000601155 540 ntBASIC1.13□□□□□ -2.23
LYSMD1Q96S90 AC009268.2-201ENST00000621925 457 ntBASIC1.13□□□□□ -2.23
LYSMD1Q96S90 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.13□□□□□ -2.23
LYSMD1Q96S90 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.13□□□□□ -2.23
LYSMD1Q96S90 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
LYSMD1Q96S90 AP000776.1-201ENST00000530032 1663 ntBASIC1.13□□□□□ -2.23
LYSMD1Q96S90 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.13□□□□□ -2.23
LYSMD1Q96S90 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
LYSMD1Q96S90 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
LYSMD1Q96S90 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.12□□□□□ -2.23
LYSMD1Q96S90 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.12□□□□□ -2.23
LYSMD1Q96S90 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.12□□□□□ -2.23
LYSMD1Q96S90 AL158050.1-201ENST00000416077 457 ntBASIC1.12□□□□□ -2.23
LYSMD1Q96S90 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.12□□□□□ -2.23
LYSMD1Q96S90 GXYLT1P1-201ENST00000446657 490 ntBASIC1.12□□□□□ -2.23
LYSMD1Q96S90 AC092001.1-201ENST00000453012 261 ntBASIC1.12□□□□□ -2.23
LYSMD1Q96S90 MTND1P9-201ENST00000453775 944 ntBASIC1.12□□□□□ -2.23
LYSMD1Q96S90 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.12□□□□□ -2.23
LYSMD1Q96S90 AC008379.1-201ENST00000463655 464 ntBASIC1.12□□□□□ -2.23
LYSMD1Q96S90 RPL31P58-201ENST00000469001 379 ntBASIC1.12□□□□□ -2.23
LYSMD1Q96S90 RN7SKP179-201ENST00000516126 217 ntBASIC1.12□□□□□ -2.23
LYSMD1Q96S90 SNORA76.2-201ENST00000517095 137 ntBASIC1.12□□□□□ -2.23
LYSMD1Q96S90 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.12□□□□□ -2.23
LYSMD1Q96S90 OR5B19P-201ENST00000531766 928 ntBASIC1.12□□□□□ -2.23
LYSMD1Q96S90 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.12□□□□□ -2.23
LYSMD1Q96S90 KATNBL1P5-201ENST00000605015 517 ntBASIC1.12□□□□□ -2.23
LYSMD1Q96S90 AC069304.2-201ENST00000605154 435 ntBASIC1.12□□□□□ -2.23
LYSMD1Q96S90 AC087045.1-201ENST00000605856 382 ntBASIC1.12□□□□□ -2.23
LYSMD1Q96S90 AL589994.2-201ENST00000621124 579 ntBASIC1.12□□□□□ -2.23
LYSMD1Q96S90 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
LYSMD1Q96S90 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
LYSMD1Q96S90 RNU6-359P-201ENST00000365466 108 ntBASIC1.11□□□□□ -2.23
LYSMD1Q96S90 RNU6-754P-201ENST00000391166 107 ntBASIC1.11□□□□□ -2.23
LYSMD1Q96S90 RNU4-27P-201ENST00000410889 139 ntBASIC1.11□□□□□ -2.23
LYSMD1Q96S90 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.11□□□□□ -2.23
LYSMD1Q96S90 MTCO2P20-201ENST00000437339 673 ntBASIC1.11□□□□□ -2.23
LYSMD1Q96S90 RPS15AP9-201ENST00000439856 381 ntBASIC1.11□□□□□ -2.23
LYSMD1Q96S90 Z73417.1-201ENST00000447373 778 ntBASIC1.11□□□□□ -2.23
LYSMD1Q96S90 RPL7P55-201ENST00000450522 746 ntBASIC1.11□□□□□ -2.23
LYSMD1Q96S90 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.11□□□□□ -2.23
LYSMD1Q96S90 AC011005.2-201ENST00000487324 359 ntBASIC1.11□□□□□ -2.23
LYSMD1Q96S90 AC093852.1-201ENST00000503587 266 ntBASIC1.11□□□□□ -2.23
LYSMD1Q96S90 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC1.11□□□□□ -2.23
LYSMD1Q96S90 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.11□□□□□ -2.23
LYSMD1Q96S90 AC008628.1-201ENST00000508663 265 ntBASIC1.11□□□□□ -2.23
LYSMD1Q96S90 MTND5P13-201ENST00000513046 1079 ntBASIC1.11□□□□□ -2.23
LYSMD1Q96S90 RNU6-581P-201ENST00000516214 105 ntBASIC1.11□□□□□ -2.23
LYSMD1Q96S90 SNORA48.9-201ENST00000516419 162 ntBASIC1.11□□□□□ -2.23
LYSMD1Q96S90 RNU6-667P-201ENST00000517186 102 ntBASIC1.11□□□□□ -2.23
LYSMD1Q96S90 CYCSP27-201ENST00000527643 293 ntBASIC1.11□□□□□ -2.23
LYSMD1Q96S90 AC135279.1-201ENST00000543493 504 ntBASIC1.11□□□□□ -2.23
LYSMD1Q96S90 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.11□□□□□ -2.23
LYSMD1Q96S90 AC138915.2-201ENST00000569776 97 ntBASIC1.11□□□□□ -2.23
LYSMD1Q96S90 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.11□□□□□ -2.23
LYSMD1Q96S90 AP001542.2-201ENST00000593141 364 ntBASIC1.11□□□□□ -2.23
LYSMD1Q96S90 AP001485.1-201ENST00000604799 199 ntBASIC1.11□□□□□ -2.23
LYSMD1Q96S90 NDUFA8P1-201ENST00000605525 367 ntBASIC1.11□□□□□ -2.23
LYSMD1Q96S90 AC009237.15-201ENST00000610252 501 ntBASIC1.11□□□□□ -2.23
LYSMD1Q96S90 TUG1_2.1-201ENST00000614234 87 ntBASIC1.11□□□□□ -2.23
LYSMD1Q96S90 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
LYSMD1Q96S90 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
LYSMD1Q96S90 RNU6-1167P-201ENST00000363227 94 ntBASIC1.1□□□□□ -2.23
LYSMD1Q96S90 SNORD26-201ENST00000384147 75 ntBASIC1.1□□□□□ -2.23
LYSMD1Q96S90 RNU11-3P-201ENST00000391111 133 ntBASIC1.1□□□□□ -2.23
LYSMD1Q96S90 AL590084.2-201ENST00000401481 382 ntBASIC1.1□□□□□ -2.23
LYSMD1Q96S90 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.1□□□□□ -2.23
LYSMD1Q96S90 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.1□□□□□ -2.23
LYSMD1Q96S90 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.1□□□□□ -2.23
LYSMD1Q96S90 AC245102.2-201ENST00000448956 180 ntBASIC1.1□□□□□ -2.23
LYSMD1Q96S90 AC112492.4-201ENST00000456549 352 ntBASIC1.1□□□□□ -2.23
LYSMD1Q96S90 AC114981.1-201ENST00000503897 678 ntBASIC1.1□□□□□ -2.23
LYSMD1Q96S90 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.1□□□□□ -2.23
LYSMD1Q96S90 RNU6-714P-201ENST00000516963 103 ntBASIC1.1□□□□□ -2.23
LYSMD1Q96S90 ZNF971P-201ENST00000562068 1249 ntBASIC1.1□□□□□ -2.23
LYSMD1Q96S90 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.1□□□□□ -2.23
LYSMD1Q96S90 AC091057.3-201ENST00000602684 733 ntBASIC1.1□□□□□ -2.23
LYSMD1Q96S90 AC138627.2-201ENST00000624202 601 ntBASIC1.1□□□□□ -2.23
LYSMD1Q96S90 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
LYSMD1Q96S90 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.09□□□□□ -2.23
LYSMD1Q96S90 NACAP2-201ENST00000318548 624 ntBASIC1.09□□□□□ -2.23
LYSMD1Q96S90 MIR26B-201ENST00000362251 77 ntBASIC1.09□□□□□ -2.23
LYSMD1Q96S90 Y_RNA.67-201ENST00000362870 100 ntBASIC1.09□□□□□ -2.23
LYSMD1Q96S90 RNU6-216P-201ENST00000363282 104 ntBASIC1.09□□□□□ -2.23
LYSMD1Q96S90 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
LYSMD1Q96S90 RNA5SP501-201ENST00000410990 112 ntBASIC1.09□□□□□ -2.23
LYSMD1Q96S90 SNRPEP10-201ENST00000420249 274 ntBASIC1.09□□□□□ -2.23
LYSMD1Q96S90 RPL36AP53-201ENST00000432891 316 ntBASIC1.09□□□□□ -2.23
LYSMD1Q96S90 AL354941.1-201ENST00000438600 464 ntBASIC1.09□□□□□ -2.23
LYSMD1Q96S90 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.09□□□□□ -2.23
LYSMD1Q96S90 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC1.09□□□□□ -2.23
LYSMD1Q96S90 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.09□□□□□ -2.23
LYSMD1Q96S90 AC023632.1-201ENST00000518463 375 ntBASIC1.09□□□□□ -2.23
LYSMD1Q96S90 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms