Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 AC104623.2-202ENST00000623477 4002 ntBASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 SNORD113.2-201ENST00000364166 89 ntBASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 SNORA25.7-201ENST00000364375 127 ntBASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 RNU1-136P-201ENST00000384181 164 ntBASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 RNU6-281P-201ENST00000384212 103 ntBASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 MIR329-1-201ENST00000385028 80 ntBASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 RNU6-1025P-201ENST00000410629 104 ntBASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 AL158156.1-201ENST00000422509 473 ntBASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 NDUFB4P7-201ENST00000423198 363 ntBASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 RN7SL443P-201ENST00000464331 290 ntBASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 AC092754.1-201ENST00000472975 479 ntBASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 AL121594.1-201ENST00000475906 575 ntBASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 RPL36AP41-201ENST00000493820 306 ntBASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 ENPP7P11-201ENST00000505915 627 ntBASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 RNA5SP471-201ENST00000516971 106 ntBASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 RNA5SP165-201ENST00000517142 115 ntBASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 RNU4-60P-201ENST00000517239 135 ntBASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 MRPL49P2-201ENST00000521066 465 ntBASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 AC006272.2-201ENST00000594725 163 ntBASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 AC105254.2-201ENST00000603636 436 ntBASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 AC099669.2-201ENST00000616549 437 ntBASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 AC008555.8-201ENST00000623602 2168 ntBASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 MUC2-202ENST00000613187 4845 ntBASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 AL022322.2-201ENST00000624072 20397 ntBASIC4.8□□□□□ -1.64
CNTNAP3BQ96NU0 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CNTNAP3BQ96NU0 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CNTNAP3BQ96NU0 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CNTNAP3BQ96NU0 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.8□□□□□ -1.64
CNTNAP3BQ96NU0 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.8□□□□□ -1.64
CNTNAP3BQ96NU0 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CNTNAP3BQ96NU0 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CNTNAP3BQ96NU0 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CNTNAP3BQ96NU0 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CNTNAP3BQ96NU0 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.8□□□□□ -1.64
CNTNAP3BQ96NU0 RNU6-245P-201ENST00000384020 107 ntBASIC4.8□□□□□ -1.64
CNTNAP3BQ96NU0 MIR32-201ENST00000384965 70 ntBASIC4.8□□□□□ -1.64
CNTNAP3BQ96NU0 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CNTNAP3BQ96NU0 SNORD37.2-201ENST00000391075 66 ntBASIC4.8□□□□□ -1.64
CNTNAP3BQ96NU0 UBA52P6-201ENST00000399822 382 ntBASIC4.8□□□□□ -1.64
CNTNAP3BQ96NU0 YME1L1P1-201ENST00000429435 297 ntBASIC4.8□□□□□ -1.64
CNTNAP3BQ96NU0 AC104164.2-201ENST00000496953 495 ntBASIC4.8□□□□□ -1.64
CNTNAP3BQ96NU0 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CNTNAP3BQ96NU0 RN7SKP83-201ENST00000516512 178 ntBASIC4.8□□□□□ -1.64
CNTNAP3BQ96NU0 AC084851.1-201ENST00000529105 249 ntBASIC4.8□□□□□ -1.64
CNTNAP3BQ96NU0 NACAP3-201ENST00000552100 481 ntBASIC4.8□□□□□ -1.64
CNTNAP3BQ96NU0 AP000769.2-201ENST00000602344 396 ntBASIC4.8□□□□□ -1.64
CNTNAP3BQ96NU0 AC024153.1-201ENST00000603103 365 ntBASIC4.8□□□□□ -1.64
CNTNAP3BQ96NU0 AC008121.1-201ENST00000603244 268 ntBASIC4.8□□□□□ -1.64
CNTNAP3BQ96NU0 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.8□□□□□ -1.64
CNTNAP3BQ96NU0 AL161798.1-201ENST00000604630 131 ntBASIC4.8□□□□□ -1.64
CNTNAP3BQ96NU0 AC069294.1-201ENST00000608397 350 ntBASIC4.8□□□□□ -1.64
CNTNAP3BQ96NU0 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CNTNAP3BQ96NU0 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CNTNAP3BQ96NU0 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CNTNAP3BQ96NU0 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.8□□□□□ -1.64
CNTNAP3BQ96NU0 NEAT1-202ENST00000501122 22743 ntBASIC4.8□□□□□ -1.64
CNTNAP3BQ96NU0 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CNTNAP3BQ96NU0 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CNTNAP3BQ96NU0 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CNTNAP3BQ96NU0 A2MP1-204ENST00000566278 4130 ntBASIC4.79□□□□□ -1.64
CNTNAP3BQ96NU0 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CNTNAP3BQ96NU0 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.79□□□□□ -1.64
CNTNAP3BQ96NU0 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.79□□□□□ -1.64
CNTNAP3BQ96NU0 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CNTNAP3BQ96NU0 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
CNTNAP3BQ96NU0 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CNTNAP3BQ96NU0 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CNTNAP3BQ96NU0 DEFB108F-201ENST00000344638 222 ntBASIC4.79□□□□□ -1.64
CNTNAP3BQ96NU0 MIR10B-201ENST00000385011 110 ntBASIC4.79□□□□□ -1.64
CNTNAP3BQ96NU0 MIR514A1-201ENST00000385133 98 ntBASIC4.79□□□□□ -1.64
CNTNAP3BQ96NU0 MIR153-2-201ENST00000385225 87 ntBASIC4.79□□□□□ -1.64
CNTNAP3BQ96NU0 RNU6-628P-201ENST00000410675 107 ntBASIC4.79□□□□□ -1.64
CNTNAP3BQ96NU0 RNU6-1001P-201ENST00000411265 100 ntBASIC4.79□□□□□ -1.64
CNTNAP3BQ96NU0 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CNTNAP3BQ96NU0 RPL23AP49-201ENST00000492925 468 ntBASIC4.79□□□□□ -1.64
CNTNAP3BQ96NU0 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.79□□□□□ -1.64
CNTNAP3BQ96NU0 RNU6-537P-201ENST00000517277 103 ntBASIC4.79□□□□□ -1.64
CNTNAP3BQ96NU0 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.79□□□□□ -1.64
CNTNAP3BQ96NU0 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.79□□□□□ -1.64
CNTNAP3BQ96NU0 AC005868.1-201ENST00000536421 331 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms