Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 AL670379.10-201ENST00000604330 253 ntBASIC2.83□□□□□ -1.96
CMTM3Q96MX0 AL670379.9-201ENST00000605428 253 ntBASIC2.83□□□□□ -1.96
CMTM3Q96MX0 AC026585.1-201ENST00000619582 524 ntBASIC2.83□□□□□ -1.96
CMTM3Q96MX0 MIR6810-201ENST00000622701 70 ntBASIC2.83□□□□□ -1.96
CMTM3Q96MX0 AP003400.5-201ENST00000624827 617 ntBASIC2.83□□□□□ -1.96
CMTM3Q96MX0 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.83□□□□□ -1.96
CMTM3Q96MX0 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.83□□□□□ -1.96
CMTM3Q96MX0 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.82□□□□□ -1.96
CMTM3Q96MX0 RNU6-1303P-201ENST00000364841 107 ntBASIC2.82□□□□□ -1.96
CMTM3Q96MX0 Y_RNA.324-201ENST00000365165 102 ntBASIC2.82□□□□□ -1.96
CMTM3Q96MX0 RNU6-483P-201ENST00000384088 108 ntBASIC2.82□□□□□ -1.96
CMTM3Q96MX0 SNORD37.1-201ENST00000390968 65 ntBASIC2.82□□□□□ -1.96
CMTM3Q96MX0 MIR1193-201ENST00000408109 78 ntBASIC2.82□□□□□ -1.96
CMTM3Q96MX0 RNU6-648P-201ENST00000410190 107 ntBASIC2.82□□□□□ -1.96
CMTM3Q96MX0 RNA5SP229-201ENST00000410809 99 ntBASIC2.82□□□□□ -1.96
CMTM3Q96MX0 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
CMTM3Q96MX0 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.82□□□□□ -1.96
CMTM3Q96MX0 DBIP2-201ENST00000419076 262 ntBASIC2.82□□□□□ -1.96
CMTM3Q96MX0 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.82□□□□□ -1.96
CMTM3Q96MX0 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.82□□□□□ -1.96
CMTM3Q96MX0 ATP5C1P1-201ENST00000441945 895 ntBASIC2.82□□□□□ -1.96
CMTM3Q96MX0 AC006026.2-201ENST00000457376 180 ntBASIC2.82□□□□□ -1.96
CMTM3Q96MX0 FAM133DP-201ENST00000464802 691 ntBASIC2.82□□□□□ -1.96
CMTM3Q96MX0 RPL23AP70-201ENST00000483361 460 ntBASIC2.82□□□□□ -1.96
CMTM3Q96MX0 RNA5SP401-201ENST00000515920 127 ntBASIC2.82□□□□□ -1.96
CMTM3Q96MX0 RNU5B-3P-201ENST00000516601 115 ntBASIC2.82□□□□□ -1.96
CMTM3Q96MX0 Y_RNA.704-201ENST00000516851 102 ntBASIC2.82□□□□□ -1.96
CMTM3Q96MX0 RN7SKP40-201ENST00000517211 242 ntBASIC2.82□□□□□ -1.96
CMTM3Q96MX0 COX6CP5-201ENST00000527162 228 ntBASIC2.82□□□□□ -1.96
CMTM3Q96MX0 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.82□□□□□ -1.96
CMTM3Q96MX0 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC2.82□□□□□ -1.96
CMTM3Q96MX0 AK6P1-201ENST00000540219 478 ntBASIC2.82□□□□□ -1.96
CMTM3Q96MX0 CR383656.8-201ENST00000549046 145 ntBASIC2.82□□□□□ -1.96
CMTM3Q96MX0 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.82□□□□□ -1.96
CMTM3Q96MX0 AC009163.5-201ENST00000575421 637 ntBASIC2.82□□□□□ -1.96
CMTM3Q96MX0 MIR5583-1-201ENST00000580941 59 ntBASIC2.82□□□□□ -1.96
CMTM3Q96MX0 AL162413.1-201ENST00000603198 110 ntBASIC2.82□□□□□ -1.96
CMTM3Q96MX0 U3.45-201ENST00000607547 219 ntBASIC2.82□□□□□ -1.96
CMTM3Q96MX0 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.82□□□□□ -1.96
CMTM3Q96MX0 AL359198.2-201ENST00000611836 194 ntBASIC2.82□□□□□ -1.96
CMTM3Q96MX0 RMST_7.1-201ENST00000621935 268 ntBASIC2.82□□□□□ -1.96
CMTM3Q96MX0 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.82□□□□□ -1.96
CMTM3Q96MX0 AC138627.2-201ENST00000624202 601 ntBASIC2.82□□□□□ -1.96
CMTM3Q96MX0 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.82□□□□□ -1.96
CMTM3Q96MX0 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.82□□□□□ -1.96
CMTM3Q96MX0 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
CMTM3Q96MX0 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
CMTM3Q96MX0 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.82□□□□□ -1.96
CMTM3Q96MX0 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
CMTM3Q96MX0 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
CMTM3Q96MX0 RNU6-858P-201ENST00000362436 107 ntBASIC2.81□□□□□ -1.96
CMTM3Q96MX0 SET-203ENST00000372688 801 ntTSL 2 BASIC2.81□□□□□ -1.96
CMTM3Q96MX0 AL357075.1-201ENST00000404107 726 ntBASIC2.81□□□□□ -1.96
CMTM3Q96MX0 RNU6-1328P-201ENST00000410938 106 ntBASIC2.81□□□□□ -1.96
CMTM3Q96MX0 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.81□□□□□ -1.96
CMTM3Q96MX0 MICF-203ENST00000432679 129 ntBASIC2.81□□□□□ -1.96
CMTM3Q96MX0 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC2.81□□□□□ -1.96
CMTM3Q96MX0 RPS12P18-201ENST00000442381 270 ntBASIC2.81□□□□□ -1.96
CMTM3Q96MX0 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.81□□□□□ -1.96
CMTM3Q96MX0 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.81□□□□□ -1.96
CMTM3Q96MX0 RNU7-167P-201ENST00000459160 62 ntBASIC2.81□□□□□ -1.96
CMTM3Q96MX0 AP001324.2-201ENST00000461163 319 ntBASIC2.81□□□□□ -1.96
CMTM3Q96MX0 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.81□□□□□ -1.96
CMTM3Q96MX0 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.81□□□□□ -1.96
CMTM3Q96MX0 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.81□□□□□ -1.96
CMTM3Q96MX0 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.81□□□□□ -1.96
CMTM3Q96MX0 RNU4-29P-201ENST00000515943 174 ntBASIC2.81□□□□□ -1.96
CMTM3Q96MX0 RNU6-1281P-201ENST00000516223 105 ntBASIC2.81□□□□□ -1.96
CMTM3Q96MX0 SNORA70.18-201ENST00000516696 98 ntBASIC2.81□□□□□ -1.96
CMTM3Q96MX0 BTF3P12-201ENST00000519620 469 ntBASIC2.81□□□□□ -1.96
CMTM3Q96MX0 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.81□□□□□ -1.96
CMTM3Q96MX0 AL157687.1-201ENST00000554853 619 ntBASIC2.81□□□□□ -1.96
CMTM3Q96MX0 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
CMTM3Q96MX0 AL138976.2-201ENST00000563989 694 ntBASIC2.81□□□□□ -1.96
CMTM3Q96MX0 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.81□□□□□ -1.96
CMTM3Q96MX0 TPRKBP2-201ENST00000565969 475 ntBASIC2.81□□□□□ -1.96
CMTM3Q96MX0 AC068790.6-201ENST00000602558 258 ntBASIC2.81□□□□□ -1.96
CMTM3Q96MX0 AC024153.1-201ENST00000603103 365 ntBASIC2.81□□□□□ -1.96
CMTM3Q96MX0 RNU6-91P-201ENST00000607774 107 ntBASIC2.81□□□□□ -1.96
CMTM3Q96MX0 U2.17-201ENST00000611454 95 ntBASIC2.81□□□□□ -1.96
CMTM3Q96MX0 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
CMTM3Q96MX0 MIR1321-201ENST00000637766 79 ntBASIC2.81□□□□□ -1.96
CMTM3Q96MX0 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.81□□□□□ -1.96
CMTM3Q96MX0 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.81□□□□□ -1.96
CMTM3Q96MX0 MTND5P30-201ENST00000452896 1731 ntBASIC2.81□□□□□ -1.96
CMTM3Q96MX0 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.81□□□□□ -1.96
CMTM3Q96MX0 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
CMTM3Q96MX0 AL109809.4-201ENST00000603520 2185 ntBASIC2.81□□□□□ -1.96
CMTM3Q96MX0 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
CMTM3Q96MX0 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CMTM3Q96MX0 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.8□□□□□ -1.96
CMTM3Q96MX0 RNU6-461P-201ENST00000364195 107 ntBASIC2.8□□□□□ -1.96
CMTM3Q96MX0 RNA5SP51-201ENST00000364750 119 ntBASIC2.8□□□□□ -1.96
CMTM3Q96MX0 RNU6ATAC-201ENST00000408749 126 ntBASIC2.8□□□□□ -1.96
CMTM3Q96MX0 RN7SKP202-201ENST00000410439 330 ntBASIC2.8□□□□□ -1.96
CMTM3Q96MX0 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.8□□□□□ -1.96
CMTM3Q96MX0 CYCSP4-201ENST00000429682 331 ntBASIC2.8□□□□□ -1.96
CMTM3Q96MX0 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.8□□□□□ -1.96
CMTM3Q96MX0 SEPT14P3-201ENST00000439401 183 ntBASIC2.8□□□□□ -1.96
CMTM3Q96MX0 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms