Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 RNU4-12P-201ENST00000365233 139 ntBASIC3.33□□□□□ -1.88
USP38Q8NB14 Y_RNA.481-201ENST00000384373 102 ntBASIC3.33□□□□□ -1.88
USP38Q8NB14 Y_RNA.505-201ENST00000384489 102 ntBASIC3.33□□□□□ -1.88
USP38Q8NB14 RNU6-658P-201ENST00000384606 106 ntBASIC3.33□□□□□ -1.88
USP38Q8NB14 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
USP38Q8NB14 SNORD67-201ENST00000390833 111 ntBASIC3.33□□□□□ -1.88
USP38Q8NB14 MIR548F1-201ENST00000408667 84 ntBASIC3.33□□□□□ -1.88
USP38Q8NB14 AC007560.1-201ENST00000426912 237 ntBASIC3.33□□□□□ -1.88
USP38Q8NB14 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.33□□□□□ -1.88
USP38Q8NB14 AL591704.1-201ENST00000432574 275 ntBASIC3.33□□□□□ -1.88
USP38Q8NB14 TRBV1-201ENST00000476502 284 ntBASIC3.33□□□□□ -1.88
USP38Q8NB14 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.33□□□□□ -1.88
USP38Q8NB14 AC019235.1-201ENST00000503847 207 ntBASIC3.33□□□□□ -1.88
USP38Q8NB14 AC105417.1-201ENST00000514691 285 ntBASIC3.33□□□□□ -1.88
USP38Q8NB14 RNU6-685P-201ENST00000517088 95 ntBASIC3.33□□□□□ -1.88
USP38Q8NB14 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.33□□□□□ -1.88
USP38Q8NB14 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.33□□□□□ -1.88
USP38Q8NB14 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.33□□□□□ -1.88
USP38Q8NB14 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
USP38Q8NB14 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.33□□□□□ -1.88
USP38Q8NB14 AL157871.3-201ENST00000557231 293 ntBASIC3.33□□□□□ -1.88
USP38Q8NB14 CYCSP39-201ENST00000565821 309 ntBASIC3.33□□□□□ -1.88
USP38Q8NB14 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.33□□□□□ -1.88
USP38Q8NB14 AC007621.1-201ENST00000604544 437 ntBASIC3.33□□□□□ -1.88
USP38Q8NB14 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.33□□□□□ -1.88
USP38Q8NB14 AC093788.1-201ENST00000609356 927 ntBASIC3.33□□□□□ -1.88
USP38Q8NB14 AL590808.1-201ENST00000618696 141 ntBASIC3.33□□□□□ -1.88
USP38Q8NB14 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.33□□□□□ -1.88
USP38Q8NB14 MTND4P14-201ENST00000435799 1354 ntBASIC3.33□□□□□ -1.88
USP38Q8NB14 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.33□□□□□ -1.88
USP38Q8NB14 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.33□□□□□ -1.88
USP38Q8NB14 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
USP38Q8NB14 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
USP38Q8NB14 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
USP38Q8NB14 Y_RNA.33-201ENST00000362591 102 ntBASIC3.32□□□□□ -1.88
USP38Q8NB14 SNORA14A-201ENST00000364773 135 ntBASIC3.32□□□□□ -1.88
USP38Q8NB14 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
USP38Q8NB14 SNORA18.3-201ENST00000384122 132 ntBASIC3.32□□□□□ -1.88
USP38Q8NB14 RNU6-517P-201ENST00000384362 110 ntBASIC3.32□□□□□ -1.88
USP38Q8NB14 MIR181A1-201ENST00000385026 110 ntBASIC3.32□□□□□ -1.88
USP38Q8NB14 Y_RNA.599-201ENST00000410489 109 ntBASIC3.32□□□□□ -1.88
USP38Q8NB14 FCF1P9-201ENST00000412546 282 ntBASIC3.32□□□□□ -1.88
USP38Q8NB14 ATG3P1-201ENST00000419507 911 ntBASIC3.32□□□□□ -1.88
USP38Q8NB14 AC104332.2-201ENST00000429959 156 ntBASIC3.32□□□□□ -1.88
USP38Q8NB14 MTND3P21-201ENST00000433774 331 ntBASIC3.32□□□□□ -1.88
USP38Q8NB14 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
USP38Q8NB14 AL118520.1-201ENST00000450770 291 ntBASIC3.32□□□□□ -1.88
USP38Q8NB14 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.32□□□□□ -1.88
USP38Q8NB14 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.32□□□□□ -1.88
USP38Q8NB14 Y_RNA.693-201ENST00000516641 110 ntBASIC3.32□□□□□ -1.88
USP38Q8NB14 AC025755.1-201ENST00000521306 278 ntBASIC3.32□□□□□ -1.88
USP38Q8NB14 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.32□□□□□ -1.88
USP38Q8NB14 AP003122.3-201ENST00000526316 255 ntBASIC3.32□□□□□ -1.88
USP38Q8NB14 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
USP38Q8NB14 AC084851.1-201ENST00000529105 249 ntBASIC3.32□□□□□ -1.88
USP38Q8NB14 AC104383.1-201ENST00000530297 370 ntBASIC3.32□□□□□ -1.88
USP38Q8NB14 OR5BN1P-201ENST00000532955 829 ntBASIC3.32□□□□□ -1.88
USP38Q8NB14 AL512310.1-201ENST00000548639 172 ntBASIC3.32□□□□□ -1.88
USP38Q8NB14 AL391261.3-201ENST00000557194 520 ntBASIC3.32□□□□□ -1.88
USP38Q8NB14 HMGB1P33-201ENST00000563485 527 ntBASIC3.32□□□□□ -1.88
USP38Q8NB14 AC025678.1-201ENST00000567861 338 ntBASIC3.32□□□□□ -1.88
USP38Q8NB14 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.32□□□□□ -1.88
USP38Q8NB14 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.32□□□□□ -1.88
USP38Q8NB14 MIR1273C-201ENST00000578669 77 ntBASIC3.32□□□□□ -1.88
USP38Q8NB14 AC138761.3-201ENST00000579993 334 ntBASIC3.32□□□□□ -1.88
USP38Q8NB14 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.32□□□□□ -1.88
USP38Q8NB14 HMGN2P15-201ENST00000585707 270 ntBASIC3.32□□□□□ -1.88
USP38Q8NB14 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.32□□□□□ -1.88
USP38Q8NB14 AP001330.5-201ENST00000607176 411 ntBASIC3.32□□□□□ -1.88
USP38Q8NB14 AL355596.1-201ENST00000565399 3996 ntBASIC3.32□□□□□ -1.88
USP38Q8NB14 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.32□□□□□ -1.88
USP38Q8NB14 ELF2P3-201ENST00000445099 1506 ntBASIC3.32□□□□□ -1.88
USP38Q8NB14 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
USP38Q8NB14 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
USP38Q8NB14 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
USP38Q8NB14 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.31□□□□□ -1.88
USP38Q8NB14 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
USP38Q8NB14 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.31□□□□□ -1.88
USP38Q8NB14 RNU6-483P-201ENST00000384088 108 ntBASIC3.31□□□□□ -1.88
USP38Q8NB14 MIR888-201ENST00000401186 77 ntBASIC3.31□□□□□ -1.88
USP38Q8NB14 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.31□□□□□ -1.88
USP38Q8NB14 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.31□□□□□ -1.88
USP38Q8NB14 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.31□□□□□ -1.88
USP38Q8NB14 NDUFB4P5-201ENST00000415445 361 ntBASIC3.31□□□□□ -1.88
USP38Q8NB14 AC063976.3-201ENST00000426849 329 ntBASIC3.31□□□□□ -1.88
USP38Q8NB14 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.31□□□□□ -1.88
USP38Q8NB14 AC244505.4-201ENST00000434905 287 ntBASIC3.31□□□□□ -1.88
USP38Q8NB14 AC016691.1-201ENST00000441321 413 ntBASIC3.31□□□□□ -1.88
USP38Q8NB14 SSXP5-201ENST00000443473 287 ntBASIC3.31□□□□□ -1.88
USP38Q8NB14 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.31□□□□□ -1.88
USP38Q8NB14 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.31□□□□□ -1.88
USP38Q8NB14 CACYBPP2-201ENST00000453625 678 ntBASIC3.31□□□□□ -1.88
USP38Q8NB14 AC092798.1-201ENST00000458542 409 ntBASIC3.31□□□□□ -1.88
USP38Q8NB14 snoU13.15-201ENST00000459407 104 ntBASIC3.31□□□□□ -1.88
USP38Q8NB14 AC117440.1-201ENST00000474107 571 ntBASIC3.31□□□□□ -1.88
USP38Q8NB14 AL163973.1-201ENST00000484753 577 ntBASIC3.31□□□□□ -1.88
USP38Q8NB14 HIGD1AP13-201ENST00000509878 289 ntBASIC3.31□□□□□ -1.88
USP38Q8NB14 AC098591.2-201ENST00000510152 315 ntBASIC3.31□□□□□ -1.88
USP38Q8NB14 RNU6-718P-201ENST00000516166 105 ntBASIC3.31□□□□□ -1.88
USP38Q8NB14 RN7SKP43-201ENST00000516173 320 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms