Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 AL627309.6-201ENST00000606857 840 ntBASIC2.67□□□□□ -1.98
RTL3Q8N8U3 AC006338.1-201ENST00000618453 749 ntBASIC2.67□□□□□ -1.98
RTL3Q8N8U3 U6.99-201ENST00000637524 83 ntBASIC2.67□□□□□ -1.98
RTL3Q8N8U3 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.67□□□□□ -1.98
RTL3Q8N8U3 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RTL3Q8N8U3 AC080128.1-201ENST00000474389 1917 ntBASIC2.67□□□□□ -1.98
RTL3Q8N8U3 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RTL3Q8N8U3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
RTL3Q8N8U3 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.66□□□□□ -1.98
RTL3Q8N8U3 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.66□□□□□ -1.98
RTL3Q8N8U3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.66□□□□□ -1.98
RTL3Q8N8U3 MTND4P27-201ENST00000450813 1354 ntBASIC2.66□□□□□ -1.98
RTL3Q8N8U3 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.66□□□□□ -1.98
RTL3Q8N8U3 SNORD62.1-201ENST00000362541 86 ntBASIC2.66□□□□□ -1.98
RTL3Q8N8U3 RNU6-288P-201ENST00000363690 104 ntBASIC2.66□□□□□ -1.98
RTL3Q8N8U3 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.66□□□□□ -1.98
RTL3Q8N8U3 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.66□□□□□ -1.98
RTL3Q8N8U3 MRPL42P2-201ENST00000403169 426 ntBASIC2.66□□□□□ -1.98
RTL3Q8N8U3 RNU6-195P-201ENST00000411352 109 ntBASIC2.66□□□□□ -1.98
RTL3Q8N8U3 AF274854.1-201ENST00000413236 615 ntBASIC2.66□□□□□ -1.98
RTL3Q8N8U3 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
RTL3Q8N8U3 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.66□□□□□ -1.98
RTL3Q8N8U3 AL592045.1-201ENST00000429867 352 ntBASIC2.66□□□□□ -1.98
RTL3Q8N8U3 AL161651.1-201ENST00000440882 223 ntBASIC2.66□□□□□ -1.98
RTL3Q8N8U3 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.66□□□□□ -1.98
RTL3Q8N8U3 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.66□□□□□ -1.98
RTL3Q8N8U3 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.66□□□□□ -1.98
RTL3Q8N8U3 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.66□□□□□ -1.98
RTL3Q8N8U3 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.66□□□□□ -1.98
RTL3Q8N8U3 AC139453.3-201ENST00000493276 369 ntBASIC2.66□□□□□ -1.98
RTL3Q8N8U3 AC023141.11-201ENST00000508864 202 ntBASIC2.66□□□□□ -1.98
RTL3Q8N8U3 AC008716.1-201ENST00000511084 513 ntBASIC2.66□□□□□ -1.98
RTL3Q8N8U3 Vault.3-201ENST00000516676 95 ntBASIC2.66□□□□□ -1.98
RTL3Q8N8U3 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
RTL3Q8N8U3 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.66□□□□□ -1.98
RTL3Q8N8U3 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.66□□□□□ -1.98
RTL3Q8N8U3 AC011979.2-201ENST00000527568 352 ntBASIC2.66□□□□□ -1.98
RTL3Q8N8U3 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.66□□□□□ -1.98
RTL3Q8N8U3 AC243972.3-201ENST00000539655 198 ntBASIC2.66□□□□□ -1.98
RTL3Q8N8U3 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.66□□□□□ -1.98
RTL3Q8N8U3 AC006199.1-201ENST00000548728 219 ntBASIC2.66□□□□□ -1.98
RTL3Q8N8U3 AL391840.1-201ENST00000571144 367 ntBASIC2.66□□□□□ -1.98
RTL3Q8N8U3 AC007363.1-201ENST00000604736 620 ntBASIC2.66□□□□□ -1.98
RTL3Q8N8U3 AP000860.1-201ENST00000605250 559 ntBASIC2.66□□□□□ -1.98
RTL3Q8N8U3 AC092608.2-201ENST00000624427 218 ntBASIC2.66□□□□□ -1.98
RTL3Q8N8U3 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
RTL3Q8N8U3 AC110994.2-201ENST00000635481 492 ntBASIC2.66□□□□□ -1.98
RTL3Q8N8U3 MIR6733-201ENST00000635723 61 ntBASIC2.66□□□□□ -1.98
RTL3Q8N8U3 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.66□□□□□ -1.98
RTL3Q8N8U3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
RTL3Q8N8U3 AC004944.1-201ENST00000517807 3059 ntBASIC2.66□□□□□ -1.98
RTL3Q8N8U3 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
RTL3Q8N8U3 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
RTL3Q8N8U3 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
RTL3Q8N8U3 VTRNA1-1-201ENST00000363120 99 ntBASIC2.65□□□□□ -1.99
RTL3Q8N8U3 RNU6-14P-201ENST00000384630 106 ntBASIC2.65□□□□□ -1.99
RTL3Q8N8U3 MIR592-201ENST00000384959 97 ntBASIC2.65□□□□□ -1.99
RTL3Q8N8U3 RNA5SP210-201ENST00000391034 120 ntBASIC2.65□□□□□ -1.99
RTL3Q8N8U3 MTCO1P21-201ENST00000416634 589 ntBASIC2.65□□□□□ -1.99
RTL3Q8N8U3 USP9YP20-201ENST00000419224 558 ntBASIC2.65□□□□□ -1.99
RTL3Q8N8U3 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.65□□□□□ -1.99
RTL3Q8N8U3 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.65□□□□□ -1.99
RTL3Q8N8U3 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.65□□□□□ -1.99
RTL3Q8N8U3 ISCA1P6-201ENST00000427740 390 ntBASIC2.65□□□□□ -1.99
RTL3Q8N8U3 MTND3P21-201ENST00000433774 331 ntBASIC2.65□□□□□ -1.99
RTL3Q8N8U3 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.65□□□□□ -1.99
RTL3Q8N8U3 AC092473.1-201ENST00000441098 221 ntBASIC2.65□□□□□ -1.99
RTL3Q8N8U3 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.65□□□□□ -1.99
RTL3Q8N8U3 AL136380.1-201ENST00000447970 162 ntBASIC2.65□□□□□ -1.99
RTL3Q8N8U3 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.65□□□□□ -1.99
RTL3Q8N8U3 AC233279.1-201ENST00000455300 423 ntBASIC2.65□□□□□ -1.99
RTL3Q8N8U3 RNU7-26P-201ENST00000458980 63 ntBASIC2.65□□□□□ -1.99
RTL3Q8N8U3 AL121769.1-201ENST00000469473 401 ntBASIC2.65□□□□□ -1.99
RTL3Q8N8U3 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.65□□□□□ -1.99
RTL3Q8N8U3 RNU2-10P-201ENST00000516375 211 ntBASIC2.65□□□□□ -1.99
RTL3Q8N8U3 AC022616.3-201ENST00000523940 148 ntBASIC2.65□□□□□ -1.99
RTL3Q8N8U3 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.65□□□□□ -1.99
RTL3Q8N8U3 ARL2BPP2-201ENST00000550907 489 ntBASIC2.65□□□□□ -1.99
RTL3Q8N8U3 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.65□□□□□ -1.99
RTL3Q8N8U3 AL121821.2-201ENST00000556081 394 ntBASIC2.65□□□□□ -1.99
RTL3Q8N8U3 AC245505.1-201ENST00000556398 224 ntBASIC2.65□□□□□ -1.99
RTL3Q8N8U3 MIR3199-1-201ENST00000582434 88 ntBASIC2.65□□□□□ -1.99
RTL3Q8N8U3 AC005261.5-201ENST00000596280 355 ntBASIC2.65□□□□□ -1.99
RTL3Q8N8U3 AP003465.2-201ENST00000602571 373 ntBASIC2.65□□□□□ -1.99
RTL3Q8N8U3 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.65□□□□□ -1.99
RTL3Q8N8U3 MIR7157-201ENST00000635801 60 ntBASIC2.65□□□□□ -1.99
RTL3Q8N8U3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
RTL3Q8N8U3 AC099654.12-201ENST00000639868 649 ntBASIC2.65□□□□□ -1.99
RTL3Q8N8U3 MTND5P30-201ENST00000452896 1731 ntBASIC2.65□□□□□ -1.99
RTL3Q8N8U3 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
RTL3Q8N8U3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
RTL3Q8N8U3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.64□□□□□ -1.99
RTL3Q8N8U3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.64□□□□□ -1.99
RTL3Q8N8U3 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
RTL3Q8N8U3 RNU6-169P-201ENST00000365336 107 ntBASIC2.64□□□□□ -1.99
RTL3Q8N8U3 RNU6-1215P-201ENST00000384441 102 ntBASIC2.64□□□□□ -1.99
RTL3Q8N8U3 Y_RNA.516-201ENST00000384541 124 ntBASIC2.64□□□□□ -1.99
RTL3Q8N8U3 MIR301A-201ENST00000385261 86 ntBASIC2.64□□□□□ -1.99
RTL3Q8N8U3 MIR147B-201ENST00000390185 80 ntBASIC2.64□□□□□ -1.99
RTL3Q8N8U3 RPL17P50-201ENST00000396131 546 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 147.4 ms