Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 RNU6-428P-201ENST00000362942 107 ntBASIC3.91□□□□□ -1.78
TRIM48Q8IWZ4 RNA5SP97-201ENST00000365006 84 ntBASIC3.91□□□□□ -1.78
TRIM48Q8IWZ4 Y_RNA.380-201ENST00000365663 111 ntBASIC3.91□□□□□ -1.78
TRIM48Q8IWZ4 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM48Q8IWZ4 RNU6-166P-201ENST00000384371 107 ntBASIC3.91□□□□□ -1.78
TRIM48Q8IWZ4 MT-TR-201ENST00000387439 65 ntBASIC3.91□□□□□ -1.78
TRIM48Q8IWZ4 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
TRIM48Q8IWZ4 SNORA40C-201ENST00000391285 128 ntBASIC3.91□□□□□ -1.78
TRIM48Q8IWZ4 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
TRIM48Q8IWZ4 AL591034.2-201ENST00000402839 359 ntBASIC3.91□□□□□ -1.78
TRIM48Q8IWZ4 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM48Q8IWZ4 MIR1290-201ENST00000408735 78 ntBASIC3.91□□□□□ -1.78
TRIM48Q8IWZ4 MIR1252-201ENST00000408861 65 ntBASIC3.91□□□□□ -1.78
TRIM48Q8IWZ4 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.91□□□□□ -1.78
TRIM48Q8IWZ4 RPL21P66-201ENST00000426566 466 ntBASIC3.91□□□□□ -1.78
TRIM48Q8IWZ4 MTND3P9-201ENST00000429526 346 ntBASIC3.91□□□□□ -1.78
TRIM48Q8IWZ4 AC092423.1-201ENST00000430165 186 ntBASIC3.91□□□□□ -1.78
TRIM48Q8IWZ4 RPS3AP12-201ENST00000443616 753 ntBASIC3.91□□□□□ -1.78
TRIM48Q8IWZ4 RPS3AP46-201ENST00000448352 682 ntBASIC3.91□□□□□ -1.78
TRIM48Q8IWZ4 NDUFB1P2-201ENST00000449477 176 ntBASIC3.91□□□□□ -1.78
TRIM48Q8IWZ4 RN7SL585P-201ENST00000470538 280 ntBASIC3.91□□□□□ -1.78
TRIM48Q8IWZ4 AK3P2-201ENST00000507976 429 ntBASIC3.91□□□□□ -1.78
TRIM48Q8IWZ4 RNU6-794P-201ENST00000517261 64 ntBASIC3.91□□□□□ -1.78
TRIM48Q8IWZ4 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.91□□□□□ -1.78
TRIM48Q8IWZ4 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.91□□□□□ -1.78
TRIM48Q8IWZ4 AP000889.1-201ENST00000530968 660 ntBASIC3.91□□□□□ -1.78
TRIM48Q8IWZ4 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM48Q8IWZ4 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.91□□□□□ -1.78
TRIM48Q8IWZ4 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.91□□□□□ -1.78
TRIM48Q8IWZ4 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM48Q8IWZ4 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM48Q8IWZ4 AC020914.4-201ENST00000597690 277 ntBASIC3.91□□□□□ -1.78
TRIM48Q8IWZ4 AC100812.1-201ENST00000607622 580 ntBASIC3.91□□□□□ -1.78
TRIM48Q8IWZ4 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.91□□□□□ -1.78
TRIM48Q8IWZ4 AC004852.3-201ENST00000614131 326 ntBASIC3.91□□□□□ -1.78
TRIM48Q8IWZ4 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.91□□□□□ -1.78
TRIM48Q8IWZ4 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.91□□□□□ -1.78
TRIM48Q8IWZ4 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
TRIM48Q8IWZ4 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.9□□□□□ -1.78
TRIM48Q8IWZ4 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.9□□□□□ -1.78
TRIM48Q8IWZ4 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
TRIM48Q8IWZ4 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.9□□□□□ -1.78
TRIM48Q8IWZ4 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
TRIM48Q8IWZ4 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
TRIM48Q8IWZ4 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.9□□□□□ -1.78
TRIM48Q8IWZ4 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.9□□□□□ -1.79
TRIM48Q8IWZ4 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.9□□□□□ -1.79
TRIM48Q8IWZ4 RN7SKP280-201ENST00000364196 304 ntBASIC3.9□□□□□ -1.79
TRIM48Q8IWZ4 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
TRIM48Q8IWZ4 RNU6-741P-201ENST00000383889 107 ntBASIC3.9□□□□□ -1.79
TRIM48Q8IWZ4 Y_RNA.396-201ENST00000383949 103 ntBASIC3.9□□□□□ -1.79
TRIM48Q8IWZ4 Y_RNA.476-201ENST00000384347 108 ntBASIC3.9□□□□□ -1.79
TRIM48Q8IWZ4 MT-TG-201ENST00000387429 68 ntBASIC3.9□□□□□ -1.79
TRIM48Q8IWZ4 AL117339.3-201ENST00000418733 162 ntBASIC3.9□□□□□ -1.79
TRIM48Q8IWZ4 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.9□□□□□ -1.79
TRIM48Q8IWZ4 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.9□□□□□ -1.79
TRIM48Q8IWZ4 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.9□□□□□ -1.79
TRIM48Q8IWZ4 OSTCP8-201ENST00000445117 448 ntBASIC3.9□□□□□ -1.79
TRIM48Q8IWZ4 ANP32BP2-201ENST00000454525 545 ntBASIC3.9□□□□□ -1.79
TRIM48Q8IWZ4 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.9□□□□□ -1.79
TRIM48Q8IWZ4 AC092798.1-201ENST00000458542 409 ntBASIC3.9□□□□□ -1.79
TRIM48Q8IWZ4 PPIAP15-201ENST00000479662 484 ntBASIC3.9□□□□□ -1.79
TRIM48Q8IWZ4 RN7SL271P-201ENST00000487601 295 ntBASIC3.9□□□□□ -1.79
TRIM48Q8IWZ4 AP005902.1-201ENST00000521358 186 ntBASIC3.9□□□□□ -1.79
TRIM48Q8IWZ4 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.9□□□□□ -1.79
TRIM48Q8IWZ4 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
TRIM48Q8IWZ4 AC004584.2-201ENST00000570407 410 ntBASIC3.9□□□□□ -1.79
TRIM48Q8IWZ4 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.9□□□□□ -1.79
TRIM48Q8IWZ4 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.9□□□□□ -1.79
TRIM48Q8IWZ4 Z98751.3-201ENST00000604447 521 ntBASIC3.9□□□□□ -1.79
TRIM48Q8IWZ4 AL591424.2-201ENST00000617023 128 ntBASIC3.9□□□□□ -1.79
TRIM48Q8IWZ4 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.9□□□□□ -1.79
TRIM48Q8IWZ4 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.9□□□□□ -1.79
TRIM48Q8IWZ4 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
TRIM48Q8IWZ4 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TRIM48Q8IWZ4 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TRIM48Q8IWZ4 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TRIM48Q8IWZ4 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
TRIM48Q8IWZ4 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.9□□□□□ -1.79
TRIM48Q8IWZ4 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.9□□□□□ -1.79
TRIM48Q8IWZ4 AL136964.1-201ENST00000622038 2990 ntBASIC3.9□□□□□ -1.79
TRIM48Q8IWZ4 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TRIM48Q8IWZ4 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 RNU6-600P-201ENST00000362524 99 ntBASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 Y_RNA.152-201ENST00000363578 100 ntBASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 Y_RNA.222-201ENST00000364264 102 ntBASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 Y_RNA.307-201ENST00000365022 117 ntBASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 MIR625-201ENST00000385047 85 ntBASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 RN7SKP202-201ENST00000410439 330 ntBASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 RNU2-68P-201ENST00000410878 191 ntBASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 AC009237.8-201ENST00000445492 379 ntBASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 HIGD1AP2-201ENST00000446367 280 ntBASIC3.89□□□□□ -1.79
TRIM48Q8IWZ4 MTCO3P8-201ENST00000453691 755 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms