Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.65□□□□□ -1.67
USP48Q86UV5 AL135752.1-201ENST00000479477 471 ntBASIC4.65□□□□□ -1.67
USP48Q86UV5 RPL30P5-201ENST00000494923 336 ntBASIC4.65□□□□□ -1.67
USP48Q86UV5 AC026782.1-201ENST00000512952 449 ntBASIC4.65□□□□□ -1.67
USP48Q86UV5 FTH1P9-201ENST00000513251 355 ntBASIC4.65□□□□□ -1.67
USP48Q86UV5 RN7SKP18-201ENST00000516005 275 ntBASIC4.65□□□□□ -1.67
USP48Q86UV5 RNU6-1213P-201ENST00000517075 94 ntBASIC4.65□□□□□ -1.67
USP48Q86UV5 RN7SKP289-201ENST00000517244 295 ntBASIC4.65□□□□□ -1.67
USP48Q86UV5 AC025755.1-201ENST00000521306 278 ntBASIC4.65□□□□□ -1.67
USP48Q86UV5 COX6CP5-201ENST00000527162 228 ntBASIC4.65□□□□□ -1.67
USP48Q86UV5 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.65□□□□□ -1.67
USP48Q86UV5 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.65□□□□□ -1.67
USP48Q86UV5 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.65□□□□□ -1.67
USP48Q86UV5 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.65□□□□□ -1.67
USP48Q86UV5 AC091925.1-201ENST00000623204 462 ntBASIC4.65□□□□□ -1.67
USP48Q86UV5 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
USP48Q86UV5 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
USP48Q86UV5 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.65□□□□□ -1.67
USP48Q86UV5 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
USP48Q86UV5 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.64□□□□□ -1.67
USP48Q86UV5 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
USP48Q86UV5 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
USP48Q86UV5 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.64□□□□□ -1.67
USP48Q86UV5 RNA5SP51-201ENST00000364750 119 ntBASIC4.64□□□□□ -1.67
USP48Q86UV5 RNU6-1050P-201ENST00000410388 107 ntBASIC4.64□□□□□ -1.67
USP48Q86UV5 Y_RNA.623-201ENST00000411128 95 ntBASIC4.64□□□□□ -1.67
USP48Q86UV5 Z99755.1-201ENST00000414048 380 ntBASIC4.64□□□□□ -1.67
USP48Q86UV5 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.64□□□□□ -1.67
USP48Q86UV5 NDUFB4P6-201ENST00000436819 366 ntBASIC4.64□□□□□ -1.67
USP48Q86UV5 RN7SL271P-201ENST00000487601 295 ntBASIC4.64□□□□□ -1.67
USP48Q86UV5 RNU1-103P-201ENST00000516502 125 ntBASIC4.64□□□□□ -1.67
USP48Q86UV5 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.64□□□□□ -1.67
USP48Q86UV5 AC009902.1-201ENST00000519351 183 ntBASIC4.64□□□□□ -1.67
USP48Q86UV5 AC090281.1-201ENST00000523019 276 ntBASIC4.64□□□□□ -1.67
USP48Q86UV5 AC104576.1-201ENST00000524225 88 ntBASIC4.64□□□□□ -1.67
USP48Q86UV5 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.64□□□□□ -1.67
USP48Q86UV5 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.64□□□□□ -1.67
USP48Q86UV5 AC136601.2-201ENST00000604356 474 ntBASIC4.64□□□□□ -1.67
USP48Q86UV5 AC004805.2-201ENST00000605382 482 ntBASIC4.64□□□□□ -1.67
USP48Q86UV5 AC009229.3-201ENST00000608056 282 ntBASIC4.64□□□□□ -1.67
USP48Q86UV5 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.64□□□□□ -1.67
USP48Q86UV5 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.64□□□□□ -1.67
USP48Q86UV5 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.64□□□□□ -1.67
USP48Q86UV5 NCAPGP1-201ENST00000505112 1814 ntBASIC4.64□□□□□ -1.67
USP48Q86UV5 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.64□□□□□ -1.67
USP48Q86UV5 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
USP48Q86UV5 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.64□□□□□ -1.67
USP48Q86UV5 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.64□□□□□ -1.67
USP48Q86UV5 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
USP48Q86UV5 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.64□□□□□ -1.67
USP48Q86UV5 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
USP48Q86UV5 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.63□□□□□ -1.67
USP48Q86UV5 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
USP48Q86UV5 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.63□□□□□ -1.67
USP48Q86UV5 SNORD14B-201ENST00000364533 90 ntBASIC4.63□□□□□ -1.67
USP48Q86UV5 RNU6-306P-201ENST00000384617 107 ntBASIC4.63□□□□□ -1.67
USP48Q86UV5 SNORD73A-201ENST00000386062 65 ntBASIC4.63□□□□□ -1.67
USP48Q86UV5 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
USP48Q86UV5 AL445529.1-201ENST00000398713 389 ntBASIC4.63□□□□□ -1.67
USP48Q86UV5 Y_RNA.594-201ENST00000410373 140 ntBASIC4.63□□□□□ -1.67
USP48Q86UV5 AL592148.1-201ENST00000413568 445 ntBASIC4.63□□□□□ -1.67
USP48Q86UV5 TOMM20P4-201ENST00000427861 435 ntBASIC4.63□□□□□ -1.67
USP48Q86UV5 AC097713.2-201ENST00000430199 356 ntBASIC4.63□□□□□ -1.67
USP48Q86UV5 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC4.63□□□□□ -1.67
USP48Q86UV5 AL583843.1-201ENST00000456070 346 ntBASIC4.63□□□□□ -1.67
USP48Q86UV5 SNORD5.1-201ENST00000458800 75 ntBASIC4.63□□□□□ -1.67
USP48Q86UV5 AC097473.1-201ENST00000508142 408 ntBASIC4.63□□□□□ -1.67
USP48Q86UV5 MIR2114-201ENST00000516645 80 ntBASIC4.63□□□□□ -1.67
USP48Q86UV5 AC022695.1-201ENST00000522089 237 ntBASIC4.63□□□□□ -1.67
USP48Q86UV5 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.63□□□□□ -1.67
USP48Q86UV5 AC099506.2-201ENST00000623074 221 ntBASIC4.63□□□□□ -1.67
USP48Q86UV5 SCARNA15.3-201ENST00000626315 122 ntBASIC4.63□□□□□ -1.67
USP48Q86UV5 SCARNA4.1-201ENST00000628597 123 ntBASIC4.63□□□□□ -1.67
USP48Q86UV5 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
USP48Q86UV5 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.63□□□□□ -1.67
USP48Q86UV5 AL049641.1-201ENST00000441055 1948 ntBASIC4.63□□□□□ -1.67
USP48Q86UV5 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
USP48Q86UV5 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
USP48Q86UV5 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
USP48Q86UV5 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
USP48Q86UV5 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
USP48Q86UV5 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.62□□□□□ -1.67
USP48Q86UV5 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
USP48Q86UV5 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.62□□□□□ -1.67
USP48Q86UV5 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
USP48Q86UV5 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
USP48Q86UV5 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.62□□□□□ -1.67
USP48Q86UV5 RNU6-384P-201ENST00000364900 104 ntBASIC4.62□□□□□ -1.67
USP48Q86UV5 RNU6-331P-201ENST00000384724 107 ntBASIC4.62□□□□□ -1.67
USP48Q86UV5 MIR490-201ENST00000384865 128 ntBASIC4.62□□□□□ -1.67
USP48Q86UV5 MIR325-201ENST00000385260 98 ntBASIC4.62□□□□□ -1.67
USP48Q86UV5 HMGN2P8-201ENST00000391458 268 ntBASIC4.62□□□□□ -1.67
USP48Q86UV5 MIR1251-201ENST00000408552 70 ntBASIC4.62□□□□□ -1.67
USP48Q86UV5 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.62□□□□□ -1.67
USP48Q86UV5 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.62□□□□□ -1.67
USP48Q86UV5 AC092047.1-201ENST00000424997 240 ntBASIC4.62□□□□□ -1.67
USP48Q86UV5 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
USP48Q86UV5 AL627311.1-201ENST00000431514 115 ntBASIC4.62□□□□□ -1.67
USP48Q86UV5 AC236972.1-201ENST00000433225 199 ntBASIC4.62□□□□□ -1.67
USP48Q86UV5 SNRPEP9-201ENST00000436794 238 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms