Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.82□□□□□ -1.64
LYSMD3Q7Z3D4 AC133555.2-201ENST00000550213 292 ntBASIC4.82□□□□□ -1.64
LYSMD3Q7Z3D4 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.82□□□□□ -1.64
LYSMD3Q7Z3D4 MIR3667-201ENST00000581025 74 ntBASIC4.82□□□□□ -1.64
LYSMD3Q7Z3D4 AC022726.1-201ENST00000587475 207 ntBASIC4.82□□□□□ -1.64
LYSMD3Q7Z3D4 FAM27B-201ENST00000610601 213 ntBASIC4.82□□□□□ -1.64
LYSMD3Q7Z3D4 AC099669.2-201ENST00000616549 437 ntBASIC4.82□□□□□ -1.64
LYSMD3Q7Z3D4 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
LYSMD3Q7Z3D4 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
LYSMD3Q7Z3D4 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
LYSMD3Q7Z3D4 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.82□□□□□ -1.64
LYSMD3Q7Z3D4 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
LYSMD3Q7Z3D4 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
LYSMD3Q7Z3D4 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.82□□□□□ -1.64
LYSMD3Q7Z3D4 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LYSMD3Q7Z3D4 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.81□□□□□ -1.64
LYSMD3Q7Z3D4 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.81□□□□□ -1.64
LYSMD3Q7Z3D4 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.81□□□□□ -1.64
LYSMD3Q7Z3D4 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
LYSMD3Q7Z3D4 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
LYSMD3Q7Z3D4 SMG1P6-201ENST00000532337 2930 ntBASIC4.81□□□□□ -1.64
LYSMD3Q7Z3D4 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LYSMD3Q7Z3D4 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.81□□□□□ -1.64
LYSMD3Q7Z3D4 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LYSMD3Q7Z3D4 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LYSMD3Q7Z3D4 RNU6-834P-201ENST00000362367 110 ntBASIC4.81□□□□□ -1.64
LYSMD3Q7Z3D4 RNU6-1272P-201ENST00000362776 107 ntBASIC4.81□□□□□ -1.64
LYSMD3Q7Z3D4 RNU6-527P-201ENST00000363425 104 ntBASIC4.81□□□□□ -1.64
LYSMD3Q7Z3D4 RNU4-11P-201ENST00000365287 132 ntBASIC4.81□□□□□ -1.64
LYSMD3Q7Z3D4 MIR192-201ENST00000384915 110 ntBASIC4.81□□□□□ -1.64
LYSMD3Q7Z3D4 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LYSMD3Q7Z3D4 RNA5SP296-201ENST00000410523 111 ntBASIC4.81□□□□□ -1.64
LYSMD3Q7Z3D4 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LYSMD3Q7Z3D4 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.81□□□□□ -1.64
LYSMD3Q7Z3D4 RN7SL738P-201ENST00000470264 297 ntBASIC4.81□□□□□ -1.64
LYSMD3Q7Z3D4 AL671862.1-201ENST00000515851 349 ntBASIC4.81□□□□□ -1.64
LYSMD3Q7Z3D4 RNA5SP249-201ENST00000516127 99 ntBASIC4.81□□□□□ -1.64
LYSMD3Q7Z3D4 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LYSMD3Q7Z3D4 AP001880.2-201ENST00000538233 448 ntBASIC4.81□□□□□ -1.64
LYSMD3Q7Z3D4 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.81□□□□□ -1.64
LYSMD3Q7Z3D4 AC090616.3-201ENST00000582184 217 ntBASIC4.81□□□□□ -1.64
LYSMD3Q7Z3D4 RN7SL52P-201ENST00000584271 284 ntBASIC4.81□□□□□ -1.64
LYSMD3Q7Z3D4 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.81□□□□□ -1.64
LYSMD3Q7Z3D4 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.81□□□□□ -1.64
LYSMD3Q7Z3D4 RN7SL722P-201ENST00000617780 284 ntBASIC4.81□□□□□ -1.64
LYSMD3Q7Z3D4 RN7SL565P-201ENST00000618246 284 ntBASIC4.81□□□□□ -1.64
LYSMD3Q7Z3D4 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.81□□□□□ -1.64
LYSMD3Q7Z3D4 SCARNA4-202ENST00000625402 129 ntBASIC4.81□□□□□ -1.64
LYSMD3Q7Z3D4 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LYSMD3Q7Z3D4 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
LYSMD3Q7Z3D4 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LYSMD3Q7Z3D4 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.81□□□□□ -1.64
LYSMD3Q7Z3D4 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
LYSMD3Q7Z3D4 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
LYSMD3Q7Z3D4 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.8□□□□□ -1.64
LYSMD3Q7Z3D4 SNORA63.4-201ENST00000362763 126 ntBASIC4.8□□□□□ -1.64
LYSMD3Q7Z3D4 MIR539-201ENST00000365690 78 ntBASIC4.8□□□□□ -1.64
LYSMD3Q7Z3D4 MIR487A-201ENST00000385009 80 ntBASIC4.8□□□□□ -1.64
LYSMD3Q7Z3D4 AL590139.1-201ENST00000416267 400 ntBASIC4.8□□□□□ -1.64
LYSMD3Q7Z3D4 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.8□□□□□ -1.64
LYSMD3Q7Z3D4 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.8□□□□□ -1.64
LYSMD3Q7Z3D4 IGLV2-34-201ENST00000490007 283 ntBASIC4.8□□□□□ -1.64
LYSMD3Q7Z3D4 AC091868.1-201ENST00000508746 304 ntBASIC4.8□□□□□ -1.64
LYSMD3Q7Z3D4 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.8□□□□□ -1.64
LYSMD3Q7Z3D4 RNU6-58P-201ENST00000517143 103 ntBASIC4.8□□□□□ -1.64
LYSMD3Q7Z3D4 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
LYSMD3Q7Z3D4 MIR5699-201ENST00000578903 90 ntBASIC4.8□□□□□ -1.64
LYSMD3Q7Z3D4 MIR4270-201ENST00000581799 70 ntBASIC4.8□□□□□ -1.64
LYSMD3Q7Z3D4 AL357075.2-201ENST00000614906 189 ntBASIC4.8□□□□□ -1.64
LYSMD3Q7Z3D4 AC027309.3-201ENST00000623419 351 ntBASIC4.8□□□□□ -1.64
LYSMD3Q7Z3D4 AC048347.1-201ENST00000624621 427 ntBASIC4.8□□□□□ -1.64
LYSMD3Q7Z3D4 MIR4679-1-201ENST00000637619 75 ntBASIC4.8□□□□□ -1.64
LYSMD3Q7Z3D4 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LYSMD3Q7Z3D4 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
LYSMD3Q7Z3D4 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
LYSMD3Q7Z3D4 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LYSMD3Q7Z3D4 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LYSMD3Q7Z3D4 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
LYSMD3Q7Z3D4 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LYSMD3Q7Z3D4 RNU5B-2P-201ENST00000363036 113 ntBASIC4.79□□□□□ -1.64
LYSMD3Q7Z3D4 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.79□□□□□ -1.64
LYSMD3Q7Z3D4 RNU1-82P-201ENST00000390851 165 ntBASIC4.79□□□□□ -1.64
LYSMD3Q7Z3D4 MIR513C-201ENST00000401352 84 ntBASIC4.79□□□□□ -1.64
LYSMD3Q7Z3D4 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.79□□□□□ -1.64
LYSMD3Q7Z3D4 EIF4HP2-201ENST00000424380 563 ntBASIC4.79□□□□□ -1.64
LYSMD3Q7Z3D4 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.79□□□□□ -1.64
LYSMD3Q7Z3D4 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC4.79□□□□□ -1.64
LYSMD3Q7Z3D4 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.79□□□□□ -1.64
LYSMD3Q7Z3D4 AC020593.1-201ENST00000507399 299 ntBASIC4.79□□□□□ -1.64
LYSMD3Q7Z3D4 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LYSMD3Q7Z3D4 Y_RNA.797-201ENST00000515977 94 ntBASIC4.79□□□□□ -1.64
LYSMD3Q7Z3D4 SNORA72.7-201ENST00000516349 94 ntBASIC4.79□□□□□ -1.64
LYSMD3Q7Z3D4 SCARNA15.2-201ENST00000516409 127 ntBASIC4.79□□□□□ -1.64
LYSMD3Q7Z3D4 IGKV1-32-201ENST00000519290 311 ntBASIC4.79□□□□□ -1.64
LYSMD3Q7Z3D4 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.79□□□□□ -1.64
LYSMD3Q7Z3D4 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.79□□□□□ -1.64
LYSMD3Q7Z3D4 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.79□□□□□ -1.64
LYSMD3Q7Z3D4 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.79□□□□□ -1.64
LYSMD3Q7Z3D4 AC024614.2-201ENST00000577584 372 ntBASIC4.79□□□□□ -1.64
LYSMD3Q7Z3D4 AC091042.1-201ENST00000579213 173 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms